Query gi|254780532|ref|YP_003064945.1| aminodeoxychorismate lyase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 325 No_of_seqs 217 out of 1862 Neff 8.0 Searched_HMMs 33803 Date Wed Jun 1 16:34:53 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780532.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >2r1f_A Protein YCEG, predicte 100.0 1.8E-43 0 297.5 6.7 100 183-286 1-100 (100) 2 >2r1f_A Protein YCEG, predicte 99.7 9.9E-17 2.9E-21 126.6 6.9 79 104-182 2-94 (94) 3 >2r1f_A Protein YCEG, predicte 99.3 1.7E-12 5.1E-17 99.5 4.0 38 287-324 1-38 (40) 4 >2r1f_A Protein YCEG, predicte 96.3 0.012 3.6E-07 36.6 6.4 67 35-101 3-78 (94) 5 >1e0g_A Membrane-bound lytic m 57.7 7.3 0.00022 18.9 2.4 43 35-85 2-44 (48) 6 >1uw4_A UPF3X; nonsense mediat 47.9 11 0.00031 17.8 1.9 41 262-306 6-49 (91) 7 >3b5q_A Putative sulfatase YID 44.0 3.2 9.5E-05 21.1 -1.2 20 155-174 159-178 (215) 8 3bz6_A A Conserved Protein Of 41.6 11 0.00034 17.6 1.3 31 180-210 17-47 (183) 9 >3do6_A Formate--tetrahydrofol 38.9 23 0.00067 15.7 2.5 27 207-233 15-41 (128) 10 >1x9p_A Penton protein; jellyr 33.9 30 0.00089 14.9 3.0 15 37-51 32-47 (295) 11 >1jei_A Emerin; membrane prote 32.7 29 0.00086 15.0 2.2 22 260-281 15-36 (53) 12 >2v3s_A Serine/threonine-prote 26.7 40 0.0012 14.1 3.0 55 34-88 17-75 (96) 13 >1q15_A CARA; CMPR, (2S,5S)-5- 26.2 41 0.0012 14.1 3.2 24 280-303 55-79 (111) 14 >2gu1_A Zinc peptidase; alpha/ 25.6 42 0.0012 14.0 4.6 48 33-85 5-55 (95) 15 >2aff_B MKI67 FHA domain inter 23.4 38 0.0011 14.3 1.5 21 266-286 7-31 (44) No 1 >>2r1f_A Protein YCEG, predicted aminodeoxychorismate lyase; structural genomics, unknown function, PFAM 02618, PSI-2, protein structure initiative; 2.21A {Escherichia coli K12} (A:131-230) Probab=100.00 E-value=1.8e-43 Score=297.48 Aligned_cols=100 Identities=55% Similarity=0.793 Sum_probs=94.3 Q ss_pred CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCHHCCC Q ss_conf 67659999998877776526725788999999997405870244222101015566775420000001015683011023 Q gi|254780532|r 183 PIKSKEDLVILASIVEKETSRADERAHVASVFINRFSKSIRLQSDSTVIYGILEGDYDLTNRKISRSDFSIKTPYNSYLM 262 (325) Q Consensus 183 ~~~s~~evlilASIVEkEa~~~~e~~~IA~V~~NRL~~~M~Lq~D~Tv~Y~l~~~~~~~~~~~~~~~dl~~~spYNTY~~ 262 (325) |..+++|+||||||||+|++.++||++|||||+|||++||+||+|+||+|++++. ..++++.+|++++||||||++ T Consensus 1 P~~t~~e~ltlASiVe~E~~~~~d~~~IA~V~~NRL~~~m~Lq~D~Tv~Y~~g~~----~~~~~~~~~~~~~spYNTY~~ 76 (100) T 2r1f_A 1 PYKDKNQLVTXASIIEKETAVASERDQVASVFINRLRIGXRLQTDPTVIYGXGER----YNGKLSRADLETPTAYNTYTI 76 (100) T ss_dssp CCSSHHHHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHTCCCCCHHHHHHHHGGG----CCSCCCHHHHHSCCTTCTTTS T ss_pred CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC----CCCCCCHHHHCCCCCHHHHHH T ss_conf 6556346788999997750477899999999999986288623011577611465----555420766324320655300 Q ss_pred CCCCCCCCCCCCHHHHHHHCCCCC Q ss_conf 888999866432798999608788 Q gi|254780532|r 263 NGLPPTAISNPGRLSLEAVAKPLH 286 (325) Q Consensus 263 ~GLPP~PI~~pg~~ai~A~l~p~~ 286 (325) +|||||||||||.+||+|||||++ T Consensus 77 ~GLPpgPI~~Pg~~ai~AalnP~k 100 (100) T 2r1f_A 77 TGLPPGAIATPGADSLKAAAHPAK 100 (100) T ss_dssp SSCCSSCSSCCCHHHHHHHHSCCC T ss_pred CCCCCCCCCCCCHHHHHHHHCCCC T ss_conf 015741024989999999868788 No 2 >>2r1f_A Protein YCEG, predicted aminodeoxychorismate lyase; structural genomics, unknown function, PFAM 02618, PSI-2, protein structure initiative; 2.21A {Escherichia coli K12} (A:37-130) Probab=99.67 E-value=9.9e-17 Score=126.60 Aligned_cols=79 Identities=23% Similarity=0.372 Sum_probs=71.8 Q ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC--------------CCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHH Q ss_conf 33210111103489999986207311134436--------------6881000030112101468978999999999999 Q gi|254780532|r 104 LMHSISFPEGFTVKQMARRLKDNPLLVGELPL--------------ELPLEGTLCPSTYNFPLGTHRSEILNQAMLKQKQ 169 (325) Q Consensus 104 ~~~~iTI~EG~t~~ei~~~L~~~~~l~~~~~~--------------~~~lEG~l~PdTY~~~~~~s~~~il~~m~~~~~~ 169 (325) .+++||||||+|+.|++++|++.+.+..+... ..++|||||||||.|.+++++++|+++|+++|.+ T Consensus 2 ~~~~itipEG~t~~ev~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~EGyLfP~TY~~~~~~t~~~il~~m~~~~~~ 81 (94) T 2r1f_A 2 AQFPLRLVEGXRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWXYTANTTDVALLKRAHKKXVK 81 (94) T ss_dssp CCEEEECCTTCCHHHHHHHHHSSTTCBCCCSCCCHHHHHHHHTCSSTTSCTTCSCCSEEEECTTCBHHHHHHHHHHHHHH T ss_pred EEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHH T ss_conf 25899988987299999998524011011223457889874277886672046504336632457667999999999999 Q ss_pred HHHHHHHHHHHCC Q ss_conf 8755655453106 Q gi|254780532|r 170 VVDEVWEIRDVDH 182 (325) Q Consensus 170 ~~~~~~~~~~~~~ 182 (325) .+++.|..|+.++ T Consensus 82 ~l~~~~~~ra~~L 94 (94) T 2r1f_A 82 AVDSAWEGRADGL 94 (94) T ss_dssp HHHHHHHTCCTTC T ss_pred HHHHHHHHHHHCC T ss_conf 8877765432105 No 3 >>2r1f_A Protein YCEG, predicted aminodeoxychorismate lyase; structural genomics, unknown function, PFAM 02618, PSI-2, protein structure initiative; 2.21A {Escherichia coli K12} (A:231-270) Probab=99.29 E-value=1.7e-12 Score=99.52 Aligned_cols=38 Identities=50% Similarity=0.777 Sum_probs=35.9 Q ss_pred CCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCC Q ss_conf 98799998389876652999999999999999987288 Q gi|254780532|r 287 TEDLYFVGDGKGGHFFSTNFKDHTINVQKWRKMSLESK 324 (325) Q Consensus 287 ~dylyfv~~~~g~h~Fs~t~~eH~~nv~~y~~~~~~~k 324 (325) ||||||||+++|+|.||+||+||++||++||+++++++ T Consensus 1 tdyLYFVA~~dG~H~Fs~tl~eH~~~v~~y~~~~~~~~ 38 (40) T 2r1f_A 1 TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKN 38 (40) T ss_dssp CCCCEEEECSSSSEEEESSHHHHHHHHHHHHHHHHHHH T ss_pred CCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHC T ss_conf 88599998699977807899999999999999999852 No 4 >>2r1f_A Protein YCEG, predicted aminodeoxychorismate lyase; structural genomics, unknown function, PFAM 02618, PSI-2, protein structure initiative; 2.21A {Escherichia coli K12} (A:37-130) Probab=96.33 E-value=0.012 Score=36.61 Aligned_cols=67 Identities=9% Similarity=0.004 Sum_probs=50.1 Q ss_pred CEEEEECCCCCHHHHHHHHHHCCCCCCHH---HHHHHHHHCC------CCCCCCCCEEEECCCCCHHHHHHHHHHC Q ss_conf 78999888899999999999879806989---9999999538------6676257204406787589999986102 Q gi|254780532|r 35 DTIFLVRNNMSLKEISKNLFNGGVIVNPY---IFRYVTQFYF------GSRGLKTGEYEIEKGSSMSQIAEKIMYG 101 (325) Q Consensus 35 ~~~i~I~~G~s~~~I~~~L~~~gvI~s~~---~F~~~~~~~~------~~~~ikaG~Y~i~~~~s~~~il~~L~~G 101 (325) .+.|+|++|.++.+|++.|.+.+.+.... ...-..+..+ ...-+-|++|.+.++.+..+|++.+... T Consensus 3 ~~~itipEG~t~~ev~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~EGyLfP~TY~~~~~~t~~~il~~m~~~ 78 (94) T 2r1f_A 3 QFPLRLVEGXRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWXYTANTTDVALLKRAHKK 78 (94) T ss_dssp CEEEECCTTCCHHHHHHHHHSSTTCBCCCSCCCHHHHHHHHTCSSTTSCTTCSCCSEEEECTTCBHHHHHHHHHHH T ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHH T ss_conf 5899988987299999998524011011223457889874277886672046504336632457667999999999 No 5 >>1e0g_A Membrane-bound lytic murein transglycosylase D; cell WALL, hydrolase, glycosidase, lipoprotein, outer membrane, multigene family; NMR {Escherichia coli} (A:) Probab=57.65 E-value=7.3 Score=18.86 Aligned_cols=43 Identities=23% Similarity=0.261 Sum_probs=32.8 Q ss_pred CEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE Q ss_conf 789998888999999999998798069899999999538667625720440 Q gi|254780532|r 35 DTIFLVRNNMSLKEISKNLFNGGVIVNPYIFRYVTQFYFGSRGLKTGEYEI 85 (325) Q Consensus 35 ~~~i~I~~G~s~~~I~~~L~~~gvI~s~~~F~~~~~~~~~~~~ikaG~Y~i 85 (325) .+..+|.+|+|+..|+.+..- + +.-+.++++....|++|.-.. T Consensus 2 ~~~y~V~~GDTL~~IA~ky~v-----~---~~~l~~~N~~~~~i~~Gq~l~ 44 (48) T 1e0g_A 2 SITYRVRKGDSLSSIAKRHGV-----N---IKDVMRWNSDTANLQPGDKLT 44 (48) T ss_dssp CCEEEECTTCCHHHHHHHHTC-----C---HHHHHHHCSCGGGCCTTEEEE T ss_pred CEEEEECCCCCHHHHHHHHCC-----C---HHHHHHHCCCCCCCCCCCEEE T ss_conf 779998899899999999894-----9---999998749913386399999 No 6 >>1uw4_A UPF3X; nonsense mediated mRNA decay protein, RNA-binding protein, NMD, RNP domain, MIF4G domain; 1.95A {Homo sapiens} (A:) Probab=47.86 E-value=11 Score=17.81 Aligned_cols=41 Identities=20% Similarity=0.434 Sum_probs=26.4 Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCC-CCEEEEEEC--CCCCEEECCCH Q ss_conf 3888999866432798999608788-987999983--89876652999 Q gi|254780532|r 262 MNGLPPTAISNPGRLSLEAVAKPLH-TEDLYFVGD--GKGGHFFSTNF 306 (325) Q Consensus 262 ~~GLPP~PI~~pg~~ai~A~l~p~~-~dylyfv~~--~~g~h~Fs~t~ 306 (325) ..-|||+ =.++.....+.|.. .||.|||.- ..+.+.+|+-| T Consensus 6 iRrLPP~----Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAY 49 (91) T 1uw4_A 6 IRRLPPT----LTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAY 49 (91) T ss_dssp EEEECTT----CCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEE T ss_pred EECCCCC----CCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEE T ss_conf 9369898----9999999985776735899985898688997445799 No 7 >>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482} (A:57-110,A:322-482) Probab=43.98 E-value=3.2 Score=21.14 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=14.1 Q ss_pred CHHHHHHHHHHHHHHHHHHH Q ss_conf 97899999999999987556 Q gi|254780532|r 155 HRSEILNQAMLKQKQVVDEV 174 (325) Q Consensus 155 s~~~il~~m~~~~~~~~~~~ 174 (325) .-.+++++|..++.+...+. T Consensus 159 ~~~~~~~~l~~~l~~~~~~~ 178 (215) T 3b5q_A 159 KYSKILAEHRALLDDYITRS 178 (215) T ss_dssp GGHHHHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHHHHHHHH T ss_conf 43999999999999999984 No 8 >3bz6_A A Conserved Protein Of Unknown Function {Pseudomonas Syringae Pv. Tomato Str. Dc3000} (A:) Probab=41.61 E-value=11 Score=17.62 Aligned_cols=31 Identities=13% Similarity=0.260 Sum_probs=26.0 Q ss_pred HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH Q ss_conf 1066765999999887777652672578899 Q gi|254780532|r 180 VDHPIKSKEDLVILASIVEKETSRADERAHV 210 (325) Q Consensus 180 ~~~~~~s~~evlilASIVEkEa~~~~e~~~I 210 (325) ......|+.|+=+|..+||||...||-+|+- T Consensus 17 ~~~~~Ls~~e~RVLG~LiEK~~TTPd~YPLt 47 (183) T 3bz6_A 17 AEALQLNSTEVRILGCLIEKQATNPETYPLT 47 (183) T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHCGGGCSEE T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH T ss_conf 4333458888999988764220377767501 No 9 >>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} (A:112-239) Probab=38.89 E-value=23 Score=15.71 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=24.1 Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEEEEE Q ss_conf 889999999974058702442221010 Q gi|254780532|r 207 RAHVASVFINRFSKSIRLQSDSTVIYG 233 (325) Q Consensus 207 ~~~IA~V~~NRL~~~M~Lq~D~Tv~Y~ 233 (325) --++|+++-|++..|.+|++||+-+.. T Consensus 15 ~NLlaA~iDn~i~~gn~l~iDp~~I~w 41 (128) T 3do6_A 15 HNLLAAVLDSHIKHGNELKIDITRVFW 41 (128) T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEEECC T ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEE T ss_conf 999999877887623756788644787 No 10 >>1x9p_A Penton protein; jellyroll domain, anti-parallel beta sheet, insertion domain, virus like particle; HET: C15; 3.30A {Human adenovirus 2} PDB: 1x9t_A* 2bld_A 2c9f_A 2c9g_A 2c6s_A (A:88-382) Probab=33.89 E-value=30 Score=14.92 Aligned_cols=15 Identities=13% Similarity=-0.028 Sum_probs=6.3 Q ss_pred EEEECCCC-CHHHHHH Q ss_conf 99988889-9999999 Q gi|254780532|r 37 IFLVRNNM-SLKEISK 51 (325) Q Consensus 37 ~i~I~~G~-s~~~I~~ 51 (325) .++||+|- |...+.. T Consensus 32 ~~tiPEGNys~~~~ID 47 (295) T 1x9p_A 32 EFTLPEGNYSETMTID 47 (295) T ss_dssp EEECCCBCCBHHHHHH T ss_pred EEECCCCCCCHHHHHH T ss_conf 9866687751447999 No 11 >>1jei_A Emerin; membrane protein; NMR {Synthetic} (A:) Probab=32.68 E-value=29 Score=15.02 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=15.3 Q ss_pred CCCCCCCCCCCCCCCHHHHHHH Q ss_conf 0238889998664327989996 Q gi|254780532|r 260 YLMNGLPPTAISNPGRLSLEAV 281 (325) Q Consensus 260 Y~~~GLPP~PI~~pg~~ai~A~ 281 (325) -+..|+|||||-.-.+.-.+-= T Consensus 15 L~~~G~~~GPIt~tTR~vy~kk 36 (53) T 1jei_A 15 LRRYNIPHGPVVGSTRRLYEKK 36 (53) T ss_dssp HSSSCCSCCCCCSGGGHHHHHH T ss_pred HHHHCCCCCCCCCCHHHHHHHH T ss_conf 9992999888006139999999 No 12 >>2v3s_A Serine/threonine-protein kinase OSR1; ATP-binding, magnesium, metal-binding, nucleotide-binding, phosphorylation, polymorphism, transferase; 1.70A {Homo sapiens} (A:) Probab=26.70 E-value=40 Score=14.14 Aligned_cols=55 Identities=13% Similarity=0.216 Sum_probs=38.7 Q ss_pred CCEEEEECCC-CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC---CCCCCCCEEEECCC Q ss_conf 8789998888-9999999999987980698999999995386---67625720440678 Q gi|254780532|r 34 NDTIFLVRNN-MSLKEISKNLFNGGVIVNPYIFRYVTQFYFG---SRGLKTGEYEIEKG 88 (325) Q Consensus 34 ~~~~i~I~~G-~s~~~I~~~L~~~gvI~s~~~F~~~~~~~~~---~~~ikaG~Y~i~~~ 88 (325) ++.-|+-.+| +|...|+++|..+|++.-.......+.+.+. ....|.=+|.+..+ T Consensus 17 nDIrFef~~g~DTaegia~ELv~AgLVDg~D~vivAanLqklv~~~~~~k~vtF~L~SG 75 (96) T 2v3s_A 17 NDIRFEFTPGRDTAEGVSQELISAGLVDGRDLVIVAANLQKIVEEPQSNRSVTFKLASG 75 (96) T ss_dssp EEEEEEECTTTCCHHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHCTTTCSEEEEECGGG T ss_pred HCEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC T ss_conf 14267730587641046788863567577118999988999861805464289985377 No 13 >>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} (A:41-123,A:182-209) Probab=26.23 E-value=41 Score=14.09 Aligned_cols=24 Identities=8% Similarity=0.224 Sum_probs=12.3 Q ss_pred HHCCCCCCCEEEEEECCCCC-EEEC Q ss_conf 96087889879999838987-6652 Q gi|254780532|r 280 AVAKPLHTEDLYFVGDGKGG-HFFS 303 (325) Q Consensus 280 A~l~p~~~dylyfv~~~~g~-h~Fs 303 (325) +||.-+++||-||.-+++|+ |.++ T Consensus 55 sALsLAEGDFcFFIEdknG~L~llT 79 (111) T 1q15_A 55 NALALAEGDFCFFIDEPNGELTVIT 79 (111) T ss_dssp GGGGGCCSSEEEEEECTTSCEEEEE T ss_pred HHHHHCCEEEEEEEECCCCEEEEEE T ss_conf 8998708768999997899499998 No 14 >>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae} (A:1-95) Probab=25.58 E-value=42 Score=14.02 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=28.6 Q ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCC---CCCCCCCCEEEE Q ss_conf 78789998888999999999998798069899999999538---667625720440 Q gi|254780532|r 33 QNDTIFLVRNNMSLKEISKNLFNGGVIVNPYIFRYVTQFYF---GSRGLKTGEYEI 85 (325) Q Consensus 33 ~~~~~i~I~~G~s~~~I~~~L~~~gvI~s~~~F~~~~~~~~---~~~~ikaG~Y~i 85 (325) .......|.+|+|+..|+++.. +....+..+ .+..+ ....|++|.=.. T Consensus 5 ~~~~~~~V~~GDTL~~Ia~~~g----v~~~~l~~~-~~~~~~~~~~~~l~~Gq~l~ 55 (95) T 2gu1_A 5 PKRIHYMVKVGDTLSGIFAQLG----VPYSILQKI-LSVDLDHLQLDMIQPGEELE 55 (95) T ss_dssp --CEEEECCTTCCHHHHHHHTT----CCHHHHHHH-HHHGGGTCCGGGCCTTCEEE T ss_pred CCEEEEEECCCCCHHHHHHHCC----CCHHHHHHH-HHHCCCCCCHHHCCCCCEEE T ss_conf 8436889899984999998859----899999999-97360457462179999899 No 15 >>2aff_B MKI67 FHA domain interacting nucleolar phosphoprotein; NIFK, , cell cycle; HET: SEP TPO; NMR {Escherichia coli} (B:) Probab=23.44 E-value=38 Score=14.28 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=14.4 Q ss_pred CCCCCCCCC----HHHHHHHCCCCC Q ss_conf 999866432----798999608788 Q gi|254780532|r 266 PPTAISNPG----RLSLEAVAKPLH 286 (325) Q Consensus 266 PP~PI~~pg----~~ai~A~l~p~~ 286 (325) -|||+|.|. +.|-.|.++..+ T Consensus 7 ~pTPVCTPtfLErRKsq~a~~~~dd 31 (44) T 2aff_B 7 GPXPVCXPTFLERRKSQVAELNDDD 31 (44) T ss_dssp SCCCCCCHHHHHHHHHHHHHCCGGG T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCC T ss_conf 9976456889988787886506987 Done!