HHsearch alignment for GI: 254780533 and conserved domain: COG3425

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism].
Probab=98.62  E-value=1.4e-07  Score=67.37  Aligned_cols=262  Identities=19%  Similarity=0.174  Sum_probs=146.6

Q ss_pred             CEEEEEEEEECCCCC-CHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCHHHHHHHCHHH
Q ss_conf             389994547718898-9999999998298655307887550048666141515654553457957678989998528999
Q gi|254780533|r    3 RVVVTGLGMITPLGC-GVDVSWSRLIAGEVGIRHLDQKFDLEGLSSKIAGLIPVGNGSDGTFNYEDWILSSDLRKIDQFI   81 (423)
Q Consensus         3 rVaItG~g~v~p~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~ag~i~~~~~~~~~f~~~~~i~~~~~~~~d~~~   81 (423)
T Consensus         2 ~iGI~~~g~y~p~~~i~~~ela~~~--g----------~d~~k~~~gl~--~-----------~e~sv~~~----~ED~v   52 (377)
T COG3425           2 MIGIVGIGAYIPRYRIKLEELARAW--G----------VDPEKIKKGLG--V-----------EEKSVPPW----DEDAV   52 (377)
T ss_pred             CCCCCEEEEECCCEEEEHHHHHHHC--C----------CCHHHHHHCCC--C-----------CCCCCCCC----CHHHH
T ss_conf             5551238885662386099997632--8----------88377653004--2-----------34467997----42089


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCC
Q ss_conf             999999763221002681002686531-1024455686000000123455432100121000013210102233333211
Q gi|254780533|r   82 LYGMVASDMALADSGWAPKTDKDRNST-GVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQL  160 (423)
Q Consensus        82 ~l~l~aa~~Al~dAGl~~~~~~~~~r~-gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l  160 (423)
T Consensus        53 TmaveAA~~~l~r~~~D~~~------Ig~v~vgTES~~d~----------------~K----------~~at~v~~~lg~  100 (377)
T COG3425          53 TMAVEAARNALKRADIDPSK------IGAVIVGSESGPDA----------------VK----------PTATIVAEALGL  100 (377)
T ss_pred             HHHHHHHHHHHHCCCCCHHH------CCEEEEECCCCCCC----------------CC----------CHHHHHHHHHCC
T ss_conf             99999999987513889889------66699953777654----------------44----------058999998389


Q ss_pred             CCCCCCC--CCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf             0001133--34444322344332331335602100121011223222234332101245666668422002220346765
Q gi|254780533|r  161 RGPNHAV--TTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRDGF  238 (423)
Q Consensus       161 ~Gp~~ti--~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd~~~dG~  238 (423)
T Consensus       101 ~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~-----------~~~~~--------~~--------E~  153 (377)
T COG3425         101 NPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQ-----------YAPGD--------AL--------EY  153 (377)
T ss_pred             CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHC-----------CCCCC--------CC--------CC
T ss_conf             97512056787899889999999999972875541799631103-----------58886--------56--------76


Q ss_pred             CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC----CCC--CC--------CHHHHHHCCCCCCCCCC
Q ss_conf             332440454102345444332233332110012-1111221000----121--10--------01332101333232223
Q gi|254780533|r  239 VMGEGAGALVLEDLEHAKARGAKIYSEIIGYGL-SGDAFHITMP----PED--GN--------GAYRCMSSAIARAKLLP  303 (423)
Q Consensus       239 ~~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~-~~d~~~~~~~----~~~--~~--------~~~~~i~~aL~~a~i~~  303 (423)
T Consensus       154 t~GAGavA~lIg~n~-------~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~  226 (377)
T COG3425         154 TAGAGAVAFLIGKNP-------PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSP  226 (377)
T ss_pred             CCCCCEEEEEEECCC-------CEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             677860899980698-------7278724756774577761466898466407635589999999999999999838984


Q ss_pred             CCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf             33310210367654432013567764200243411137012-2122368999999999999
Q gi|254780533|r  304 SDIDYINAHGTSTIADTIELGAVERLMGDSCYHVSMSSTKS-AMGHLLGAAGAVEAAICNL  363 (423)
Q Consensus       304 ~di~~i~~hgtgt~~D~~E~~al~~~f~~~~~~~~v~s~K~-~~Gh~~~asG~~~l~~~~l  363 (423)
T Consensus       227 ~dfdy~vfH~P~~---k~~~ka~k~l~~-~~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld  283 (377)
T COG3425         227 DDFDYIVFHQPNG---KFPKKAAKSLGF-KEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD  283 (377)
T ss_pred             HHHCEEEECCCCC---CHHHHHHHHHCC-CHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             5507598317987---248999998573-47662843011665275111069999999985