HHsearch alignment for GI: 254780533 and conserved domain: PRK06059
>PRK06059 lipid-transfer protein; Provisional.
Probab=99.73 E-value=1e-17 Score=132.24 Aligned_cols=288 Identities=18% Similarity=0.220 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCC
Q ss_conf 99999997632210026810026865311024455686000000123455432100121000013210102233333211
Q gi|254780533|r 81 ILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQL 160 (423)
Q Consensus 81 ~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 160 (423)
T Consensus 24 ~~l~~eA~~~AL~DAGl~~~d-VD----~v~~~~~~~~~----------------------~~~~---~~~~~~a~~lGl 73 (399)
T PRK06059 24 TEYGVVAARAALADAGLDWRQ-VQ----LVAGADTIRNG----------------------YPGF---VAGATFAQKLGW 73 (399)
T ss_pred HHHHHHHHHHHHHHCCCCHHH-CC----EEEEECCCCCC----------------------CCCC---CHHHHHHHHCCC
T ss_conf 999999999999855999899-46----88430345667----------------------7753---226999997599
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHH------------HHHHHHHCCC--------CC--
Q ss_conf 00-0113334444322344332331335602100121011223222------------2343321012--------45--
Q gi|254780533|r 161 RG-PNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRL------------GVASFAACRA--------LS-- 217 (423)
Q Consensus 161 ~G-p~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~------------~~~~f~~~~~--------ls-- 217 (423)
T Consensus 74 ~g~p~~~v~~~~asG~~a~~~A~~~I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~r 153 (399)
T PRK06059 74 NGVPVTSSYAACASGSQALQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARR 153 (399)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 88631121162489999999999999849987899940335787654455455667711444301478508899999999
Q ss_pred --CCCC------------------CCHHHHH-HHHH--------------CCCCCCCCCCCCEEEECCCCCCCCCCC--C
Q ss_conf --6666------------------6842200-2220--------------346765332440454102345444332--2
Q gi|254780533|r 218 --TRFN------------------DDPTRAS-RPFD--------------QDRDGFVMGEGAGALVLEDLEHAKARG--A 260 (423)
Q Consensus 218 --~~~~------------------~~p~~~~-rpFd--------------~~~dG~~~gEGa~~lvLe~~~~A~~rg--~ 260 (423)
T Consensus 154 ym~~yG~t~e~lA~vavk~~~~a~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~ 233 (399)
T PRK06059 154 RMDLYGATVEDFAQVKVKNARHGLDNPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSV 233 (399)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCC
T ss_conf 99997979999999999999877109286668998878872382645261551317888850899995599998722356
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-C-------------CCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHH
Q ss_conf 3333211001211112210001-2-------------1100133210133323222333310210367654432013567
Q gi|254780533|r 261 KIYSEIIGYGLSGDAFHITMPP-E-------------DGNGAYRCMSSAIARAKLLPSDIDYINAHGTSTIADTIELGAV 326 (423)
Q Consensus 261 ~i~a~i~G~~~~~d~~~~~~~~-~-------------~~~~~~~~i~~aL~~a~i~~~di~~i~~hgtgt~~D~~E~~al 326 (423)
T Consensus 234 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~l 313 (399)
T PRK06059 234 AGVPSVRAISTVTPQYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHL 313 (399)
T ss_pred CCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHC
T ss_conf 78839999984057544333233321222101023315567899999999982999788727753166609899999984
Q ss_pred H--------HHHHC----CCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7--------64200----243411137012--212236899999999999998708327758887887448865078867
Q gi|254780533|r 327 E--------RLMGD----SCYHVSMSSTKS--AMGHLLGAAGAVEAAICNLAIRDGIVPATLNLDNPAKKTFIDLVPHRA 392 (423)
Q Consensus 327 ~--------~~f~~----~~~~~~v~s~K~--~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~ 392 (423)
T Consensus 314 Gf~~~Ge~~~~v~~G~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag--------------------~r 373 (399)
T PRK06059 314 GLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQAT--------------------GR 373 (399)
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCC--------------------CC
T ss_conf 9978983799997799667997035588602118996615799999999999748876--------------------77
Q ss_pred CCCCCCEEEEECCCCCCEEEEEEEEE
Q ss_conf 24788789994456777358999982
Q gi|254780533|r 393 IKKNVNVAMSNSFGFGGTNVSLVFRK 418 (423)
Q Consensus 393 ~~~~~~~al~~s~G~gG~n~~~il~~ 418 (423)
T Consensus 374 QV~~a~~gl~~n~G~~~~~~~~~~~r 399 (399)
T PRK06059 374 QVEGAKVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred CCCCCCEEEECCCCCCCCCEEEEEEC
T ss_conf 38986178874778877732999859