HHsearch alignment for GI: 254780533 and conserved domain: PRK13359
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional.
Probab=99.53 E-value=2.4e-15 Score=117.06 Aligned_cols=267 Identities=22% Similarity=0.283 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCC--
Q ss_conf 9999997632210-0268100268653110244556860000001234554321001210000132101022333332--
Q gi|254780533|r 82 LYGMVASDMALAD-SGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRN-- 158 (423)
Q Consensus 82 ~l~l~aa~~Al~d-AGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~-- 158 (423)
T Consensus 28 ~L~a~~i~~~l~r~~~i~~~~-Id----~Vi~G~~~~~g~~g---~----------------------n~aR~~aL~aGl 77 (400)
T PRK13359 28 DLGAVPLKALVERNRDVDWAA-ID----DVIYGCANQAGEDN---R----------------------NVARMSLLLAGL 77 (400)
T ss_pred HHHHHHHHHHHHHCCCCCHHH-CC----EEEEECCCCCCCCC---C----------------------CHHHHHHHHCCC
T ss_conf 999999999997269979899-99----79998277556545---7----------------------689999997699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHH-HHHH----HHHH----------------------
Q ss_conf 110001133344443223443323313356021001210112232-2223----4332----------------------
Q gi|254780533|r 159 QLRGPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPIC-RLGV----ASFA---------------------- 211 (423)
Q Consensus 159 ~l~Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~-~~~~----~~f~---------------------- 211 (423)
T Consensus 78 p~~vpa~TVnr~C~SGl~Ai~~aa~~I~~G~~dvviAGGvEsmS~~P~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 157 (400)
T PRK13359 78 PHGVPGTTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQL 157 (400)
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 98876267613211499999999999857998878851551155564003655444456652123312101368244543
Q ss_pred ----HCCC----CCCCCC-----------------------------------------------------CCHHH--HH
Q ss_conf ----1012----456666-----------------------------------------------------68422--00
Q gi|254780533|r 212 ----ACRA----LSTRFN-----------------------------------------------------DDPTR--AS 228 (423)
Q Consensus 212 ----~~~~----ls~~~~-----------------------------------------------------~~p~~--~~ 228 (423)
T Consensus 158 ~~~~~Mg~tAE~~A~~~gisRe~qD~~A~~Sh~rA~~A~~~G~f~~EIvPv~~~~~~g~~~~~~~De~~R~tt~e~La~L 237 (400)
T PRK13359 158 YGVDSMPETAENVATDYNISRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPVVVSRDEHPRETTLEALAKL 237 (400)
T ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHCC
T ss_conf 06784789999999986989999999999999999998765984025886775267786378806878666776666326
Q ss_pred H-HHHCCCCCCC-------CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 2-2203467653-------3244045410234544433223333211001211112210001211001332101333232
Q gi|254780533|r 229 R-PFDQDRDGFV-------MGEGAGALVLEDLEHAKARGAKIYSEIIGYGLSGDAFHITMPPEDGNGAYRCMSSAIARAK 300 (423)
Q Consensus 229 r-pFd~~~dG~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~~i~~aL~~a~ 300 (423)
T Consensus 238 ~p~f~~--~GtvTAgNsS~~~DGAAavll~s~~~a~~~gl~p~ari~~~a~~g-----~dP~~m~~gp~~A~~k~L~~ag 310 (400)
T PRK13359 238 KGVVRP--DGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLG 310 (400)
T ss_pred CCCCCC--CCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEE-----CCHHHHHHCHHHHHHHHHHHCC
T ss_conf 875345--685635437854326788998659999987998059999889998-----2878853369999999999769
Q ss_pred CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHC--CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 22333310210367654432013567764200--2434111--3701221223689999999999999870832775888
Q gi|254780533|r 301 LLPSDIDYINAHGTSTIADTIELGAVERLMGD--SCYHVSM--SSTKSAMGHLLGAAGAVEAAICNLAIRDGIVPATLNL 376 (423)
Q Consensus 301 i~~~di~~i~~hgtgt~~D~~E~~al~~~f~~--~~~~~~v--~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~ 376 (423)
T Consensus 311 l~~~Did~~EinEAFA----~q~l~~~~~lg~~~d~~kvN~~GGai--AlGHP~GAsGarl~~~l~~~L~~~-------- 376 (400)
T PRK13359 311 MTLDQFDVIELNEAFA----SQGLAVLRMLGVADDDARVNPNGGAI--ALGHPLGASGARLVTTALYQLHRT-------- 376 (400)
T ss_pred CCCCCCCEEEEEHHHH----HHHHHHHHHCCCCCCCCCCCCCCCHH--HHCCCCCCCHHHHHHHHHHHHHHH--------
T ss_conf 9845687778604668----88999999819998777489886688--748880224799999999999980--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE
Q ss_conf 788744886507886724788789994456777358999982
Q gi|254780533|r 377 DNPAKKTFIDLVPHRAIKKNVNVAMSNSFGFGGTNVSLVFRK 418 (423)
Q Consensus 377 ~~~~~~~~~~~v~~~~~~~~~~~al~~s~G~gG~n~~~il~~ 418 (423)
T Consensus 377 -------------------~~~~Gl~t~c~ggG~G~A~~iEr 399 (400)
T PRK13359 377 -------------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred -------------------CCCEEEEEECCCCCHHHEEEEEE
T ss_conf -------------------99989999622013323698982