HHsearch alignment for GI: 254780533 and conserved domain: TIGR02446

>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806 This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=94.19  E-value=0.02  Score=34.46  Aligned_cols=133  Identities=26%  Similarity=0.328  Sum_probs=84.7

Q ss_pred             HHH-HHCCC------CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             022-20346------76533244045410234544433223333211001211-11221000121100133210133323
Q gi|254780533|r  228 SRP-FDQDR------DGFVMGEGAGALVLEDLEHAKARGAKIYSEIIGYGLSG-DAFHITMPPEDGNGAYRCMSSAIARA  299 (423)
Q Consensus       228 ~rp-Fd~~~------dG~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~~~-d~~~~~~~~~~~~~~~~~i~~aL~~a  299 (423)
T Consensus       250 lrPafd~~~G~vtaanstPltdGa~a~~lm~e~rak~lG~~~~Gy~~~yaf~ai~v~~dml~GP-----~y~t~~~l~~~  324 (430)
T TIGR02446       250 LRPAFDRKHGSVTAANSTPLTDGAAAVILMSEGRAKELGLEPLGYIRSYAFTAIDVWQDMLLGP-----SYATPLALKRA  324 (430)
T ss_pred             CCCHHHCCCCCEEECCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CHHHHHHHHHC
T ss_conf             0501211445245215666421011111001211345211355346544433322334331264-----21457899761


Q ss_pred             CCCCCCCCEEEECCCC---CCCCC---------CHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2223333102103676---54432---------013567764200---24341113701221223689999999999999
Q gi|254780533|r  300 KLLPSDIDYINAHGTS---TIADT---------IELGAVERLMGD---SCYHVSMSSTKSAMGHLLGAAGAVEAAICNLA  364 (423)
Q Consensus       300 ~i~~~di~~i~~hgtg---t~~D~---------~E~~al~~~f~~---~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~  364 (423)
T Consensus       325 Gl~l~dltli~mheafaaq~lan~~~~~s~~fa~e~lGr~~a~G~~d~~kfnvlGGs~--ayGhPfaatG~r~~tq~~~e  402 (430)
T TIGR02446       325 GLELSDLTLIDMHEAFAAQTLANVQLLASEKFAEEKLGRAKAIGEIDMSKFNVLGGSI--AYGHPFAATGARLITQTLRE  402 (430)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHH--HCCCCHHHHHHHHHHHHHHH
T ss_conf             8711123567788888888888788876556666520033213431100122113301--02774035568999999999


Q ss_pred             HHC
Q ss_conf             870
Q gi|254780533|r  365 IRD  367 (423)
Q Consensus       365 l~~  367 (423)
T Consensus       403 l~r  405 (430)
T TIGR02446       403 LKR  405 (430)
T ss_pred             HHH
T ss_conf             863