HHsearch alignment for GI: 254780533 and conserved domain: TIGR02446
>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806 This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=94.19 E-value=0.02 Score=34.46 Aligned_cols=133 Identities=26% Similarity=0.328 Sum_probs=84.7
Q ss_pred HHH-HHCCC------CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 022-20346------76533244045410234544433223333211001211-11221000121100133210133323
Q gi|254780533|r 228 SRP-FDQDR------DGFVMGEGAGALVLEDLEHAKARGAKIYSEIIGYGLSG-DAFHITMPPEDGNGAYRCMSSAIARA 299 (423)
Q Consensus 228 ~rp-Fd~~~------dG~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~~~-d~~~~~~~~~~~~~~~~~i~~aL~~a 299 (423)
T Consensus 250 lrPafd~~~G~vtaanstPltdGa~a~~lm~e~rak~lG~~~~Gy~~~yaf~ai~v~~dml~GP-----~y~t~~~l~~~ 324 (430)
T TIGR02446 250 LRPAFDRKHGSVTAANSTPLTDGAAAVILMSEGRAKELGLEPLGYIRSYAFTAIDVWQDMLLGP-----SYATPLALKRA 324 (430)
T ss_pred CCCHHHCCCCCEEECCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CHHHHHHHHHC
T ss_conf 0501211445245215666421011111001211345211355346544433322334331264-----21457899761
Q ss_pred CCCCCCCCEEEECCCC---CCCCC---------CHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2223333102103676---54432---------013567764200---24341113701221223689999999999999
Q gi|254780533|r 300 KLLPSDIDYINAHGTS---TIADT---------IELGAVERLMGD---SCYHVSMSSTKSAMGHLLGAAGAVEAAICNLA 364 (423)
Q Consensus 300 ~i~~~di~~i~~hgtg---t~~D~---------~E~~al~~~f~~---~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 364 (423)
T Consensus 325 Gl~l~dltli~mheafaaq~lan~~~~~s~~fa~e~lGr~~a~G~~d~~kfnvlGGs~--ayGhPfaatG~r~~tq~~~e 402 (430)
T TIGR02446 325 GLELSDLTLIDMHEAFAAQTLANVQLLASEKFAEEKLGRAKAIGEIDMSKFNVLGGSI--AYGHPFAATGARLITQTLRE 402 (430)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHH--HCCCCHHHHHHHHHHHHHHH
T ss_conf 8711123567788888888888788876556666520033213431100122113301--02774035568999999999
Q ss_pred HHC
Q ss_conf 870
Q gi|254780533|r 365 IRD 367 (423)
Q Consensus 365 l~~ 367 (423)
T Consensus 403 l~r 405 (430)
T TIGR02446 403 LKR 405 (430)
T ss_pred HHH
T ss_conf 863