HHsearch alignment for GI: 254780533 and conserved domain: cd00825
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=100.00 E-value=0 Score=575.48 Aligned_cols=327 Identities=32% Similarity=0.501 Sum_probs=298.5
Q ss_pred HHHHC-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCC
Q ss_conf 98528-99999999976322100268100268653110244556860000001234554321001210000132101022
Q gi|254780533|r 74 LRKID-QFILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSG 152 (423)
Q Consensus 74 ~~~~d-~~~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 152 (423)
T Consensus 4 ~~~~~~~vsl~al~aa~eAl~dAGl~~~~-~~~~r~GV~~Gs~~g~~~~~~~~~-----~~~~~~~p~~~~~~~~~~~a~ 77 (332)
T cd00825 4 ITGLGSYVSILGFEAAERAIADAGLSREY-QKNPIVGVVVGTGGGSPRFQVFGA-----DAMRAVGPYVVTKAMFPGASG 77 (332)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHCCCCHHH-CCCCCEEEEEEECCCCHHHHHHHH-----CCCCCCCCCCCCCCCCCHHHH
T ss_conf 43546599999999999999975999344-578888999996883188898531-----232236864246655348999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 33333211000113334444322344332331335602100121011223222234332101245666668422002220
Q gi|254780533|r 153 NISIRNQLRGPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFD 232 (423)
Q Consensus 153 ~is~~~~l~Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd 232 (423)
T Consensus 78 ~is~~~gl~Gp~~tv~taCaS~l~Ai~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~~~~~~~~~------~~~~~rpFd 151 (332)
T cd00825 78 QIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALST------PEKASRTFD 151 (332)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCC------CCCCCCCCC
T ss_conf 99999689896303135416889999999999983899874620312117989999999727789------898878887
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEC
Q ss_conf 34676533244045410234544433223333211001211112210001211001332101333232223333102103
Q gi|254780533|r 233 QDRDGFVMGEGAGALVLEDLEHAKARGAKIYSEIIGYGLSGDAFHITMPPEDGNGAYRCMSSAIARAKLLPSDIDYINAH 312 (423)
Q Consensus 233 ~~~dG~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~~i~~aL~~a~i~~~di~~i~~h 312 (423)
T Consensus 152 ~~~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~agi~p~~I~yI~ah 231 (332)
T cd00825 152 AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAH 231 (332)
T ss_pred CCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEC
T ss_conf 88997200265403554008888752896203311345877898788879799999999999999849882001479917
Q ss_pred CCCCC-CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67654-43201356776420024341113701221223689999999999999870832775888788744886507886
Q gi|254780533|r 313 GTSTI-ADTIELGAVERLMGDSCYHVSMSSTKSAMGHLLGAAGAVEAAICNLAIRDGIVPATLNLDNPAKKTFIDLVPHR 391 (423)
Q Consensus 313 gtgt~-~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~ 391 (423)
T Consensus 232 gtGt~~~D~~E~~Al~~~fg~~--~~~v~S~Ks~~GH~~~AsG~~~li~~~lal~~~~ipp~~n~~~~~~~~--~~~~~~ 307 (332)
T cd00825 232 GTGTPIGDVKELKLLRSEFGDK--SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG--LNIVTE 307 (332)
T ss_pred CCCCCCCCHHHHHHHHHHHCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCC
T ss_conf 7868555599999999985789--982105745644552656999999999998639608999989998332--566777
Q ss_pred CCCCCCCEEEEECCCCCCEEEEEEE
Q ss_conf 7247887899944567773589999
Q gi|254780533|r 392 AIKKNVNVAMSNSFGFGGTNVSLVF 416 (423)
Q Consensus 392 ~~~~~~~~al~~s~G~gG~n~~~il 416 (423)
T Consensus 308 ~~~~~~~~~~~nsfGfGG~Na~vvl 332 (332)
T cd00825 308 TTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCCEEEEECCCCCCEEEEEEC
T ss_conf 7689998999967026814068869