HHsearch alignment for GI: 254780533 and conserved domain: cd00828
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=100.00 E-value=0 Score=676.80 Aligned_cols=400 Identities=35% Similarity=0.522 Sum_probs=351.4
Q ss_pred CCEEEEEEEEECCCCCC---HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCHHHHHHHC
Q ss_conf 83899945477188989---999999998298655307887550048666141515654553457957678989998528
Q gi|254780533|r 2 RRVVVTGLGMITPLGCG---VDVSWSRLIAGEVGIRHLDQKFDLEGLSSKIAGLIPVGNGSDGTFNYEDWILSSDLRKID 78 (423)
Q Consensus 2 ~rVaItG~g~v~p~G~~---~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~ag~i~~~~~~~~~f~~~~~i~~~~~~~~d 78 (423)
T Consensus 1 ~RVvItGiG~~~P~G~g~~~~~~fW~~L~~G~s~i~~~~~-~~~-~~~~~~~g~v~~~-------~~~~-~~~~~~~~~d 70 (407)
T cd00828 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVAR-LKS-RFDRGVAGQIPTG-------DIPG-WDAKRTGIVD 70 (407)
T ss_pred CCEEEEECEEECCCCCCCCCHHHHHHHHHCCCCEEECCCC-CCC-CCCCEEEEECCCC-------CCCC-CCHHHHHHCC
T ss_conf 9299981718897988989999999999769976458985-546-7872386647887-------7355-8988987459
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCC
Q ss_conf 99999999976322100268100268653110244556860000001234554321001210000132101022333332
Q gi|254780533|r 79 QFILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRN 158 (423)
Q Consensus 79 ~~~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 158 (423)
T Consensus 71 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~r~gv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~i~~~~ 148 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWM--LSPNTVAGWVNILL 148 (407)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHC--CCCCHHHHHHHHHH
T ss_conf 9999999999999996799964552787669999967743888998877655405873250230--14224889999985
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 11-00011333444432234433233133560210012101122322223433210124566666842200222034676
Q gi|254780533|r 159 QL-RGPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRDG 237 (423)
Q Consensus 159 ~l-~Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd~~~dG 237 (423)
T Consensus 149 ~~~~Gp~~tv~tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~-~~~~~~~~f~~~~~ls~~-~~~p~~~~rPFD~~rdG 226 (407)
T cd00828 149 LSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVED-PLEEGLSGFANMGALSTA-EEEPEEMSRPFDETRDG 226 (407)
T ss_pred CCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC-CCCHHHHHHHHHHHHHCC-CCCCCCCEEECCCCCCC
T ss_conf 8788985265035079999999996662368514466431223-563667999874454227-89988751303667898
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 53324404541023454443322333321100121111221000121100133210133323222333310210367654
Q gi|254780533|r 238 FVMGEGAGALVLEDLEHAKARGAKIYSEIIGYGLSGDAFHITMPPEDGNGAYRCMSSAIARAKLLPSDIDYINAHGTSTI 317 (423)
Q Consensus 238 ~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~~i~~aL~~a~i~~~di~~i~~hgtgt~ 317 (423)
T Consensus 227 ~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~-~~~~~~~~~~Al~~A~i~~~~i~yI~aHgtgT~ 305 (407)
T cd00828 227 FVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAG-GKGIARAIRTALAKAGLSLDDLDVISAHGTSTP 305 (407)
T ss_pred EEECCCCEEEEEEEHHHHHHCCCEEEEEECCEEEECCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf 6834852177650486676688979996436478668988877986-267899999999971999545638995167686
Q ss_pred -CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf -43201356776420024341113701221223689999999999999870832775888788744886507886724--
Q gi|254780533|r 318 -ADTIELGAVERLMGDSCYHVSMSSTKSAMGHLLGAAGAVEAAICNLAIRDGIVPATLNLDNPAKKTFIDLVPHRAIK-- 394 (423)
Q Consensus 318 -~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~-- 394 (423)
T Consensus 306 ~gD~~E~~Al~~~f~~~~~~~~i~S~K~~~GH~~~aaG~~~li~~~l~l~~~~ippt~n~~~~~p~~~~~~~~~~~~~~~ 385 (407)
T cd00828 306 ANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLN 385 (407)
T ss_pred CCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 66999999999986213788704450123031678999999999999984397199999899997656133777687688
Q ss_pred CCCCEEEEECCCCCCEEEEEEE
Q ss_conf 7887899944567773589999
Q gi|254780533|r 395 KNVNVAMSNSFGFGGTNVSLVF 416 (423)
Q Consensus 395 ~~~~~al~~s~G~gG~n~~~il 416 (423)
T Consensus 386 ~~~~~a~~nsfGfGG~Na~lvl 407 (407)
T cd00828 386 LKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCEEEEECCCCCCEEEEEEC
T ss_conf 9997999978356805078969