HHsearch alignment for GI: 254780533 and conserved domain: pfam07451
>pfam07451 SpoVAD Stage V sporulation protein AD (SpoVAD). This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Probab=96.11 E-value=0.0029 Score=39.82 Aligned_cols=175 Identities=21% Similarity=0.213 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCC
Q ss_conf 99999997632210026810026865311024455686000000123455432100121000013210102233333211
Q gi|254780533|r 81 ILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQL 160 (423)
Q Consensus 81 ~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 160 (423)
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~d------Id~~~aG---D---------Ll-nQ------------~---i~ssf~ar~l~- 96 (329)
T pfam07451 52 SKMLEEAVKLALKKAGLKKDD------IDYLLAG---D---------LL-NQ------------I---ISSSFAARTLG- 96 (329)
T ss_pred HHHHHHHHHHHHHHCCCCHHH------CEEEEEC---H---------HH-HH------------H---HHHHHHHHHCC-
T ss_conf 999999999999874999888------6489501---2---------44-32------------5---77778898639-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 00011333444432234433233133560210012101122322223433210124566666842200222034676533
Q gi|254780533|r 161 RGPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRDGFVM 240 (423)
Q Consensus 161 ~Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd~~~dG~~~ 240 (423)
T Consensus 97 -iPf~GlyGACST~~E~l~laa~~vd~g~A~~vla~tSSH~~tA--ErQFR----~P~E-----yG~QrpptAq--WTV- 161 (329)
T pfam07451 97 -IPFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFASA--ERQFR----FPTE-----YGGQRPPTAQ--WTV- 161 (329)
T ss_pred -CCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCHHH--HHHCC----CCHH-----CCCCCCCCCC--EEE-
T ss_conf -9812113566778999999999984665434134314452036--65426----8221-----1677998663--788-
Q ss_pred CCCCEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEE
Q ss_conf 2440454102345444-33223333211001211112210-00121100133210133323222333310210
Q gi|254780533|r 241 GEGAGALVLEDLEHAK-ARGAKIYSEIIGYGLSGDAFHIT-MPPEDGNGAYRCMSSAIARAKLLPSDIDYINA 311 (423)
Q Consensus 241 gEGa~~lvLe~~~~A~-~rg~~i~a~i~G~~~~~d~~~~~-~~~~~~~~~~~~i~~aL~~a~i~~~di~~i~~ 311 (423)
T Consensus 162 -TGaGa~il~~~~~~p~It~~T-iGkVvD~Gi~-Dp~nMGaAMAP---AA~dTI~~hf~D~g~~p~dYDlIvT 228 (329)
T pfam07451 162 -TGAGAVLLGKEGDGPRITSAT-IGKVVDYGIK-DPNNMGAAMAP---AAADTIEQHFQDTGRDPSDYDLIVT 228 (329)
T ss_pred -ECEEEEEEECCCCCCEEEEEE-EEEEEECCCC-CCCCCHHHHHH---HHHHHHHHHHHHCCCCHHHCCEEEE
T ss_conf -751899994389987798987-7888765888-84302555647---8999999999970999224447996