RPSBLAST alignment for GI: 254780533 and conserved domain: cd00832

>gnl|CDD|29419 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.. Length = 399
 Score =  210 bits (535), Expect = 7e-55
 Identities = 133/417 (31%), Positives = 202/417 (48%), Gaps = 22/417 (5%)

Query: 2   RRVVVTGLGMITPLGCGVDVSWSRLIAGEVGIRHLDQKFDLEGLSSKIAGLIPVGNGSDG 61
           RR VVTG+G++ P G GV+  W  ++ G  G+  +  +FD  G  +++AG +P       
Sbjct: 1   RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPI-TRFDPSGYPARLAGEVP------- 52

Query: 62  TFNYEDWILSSDLRKIDQFILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNR 121
            F+  + +    L + D+     + A+D ALAD+G  P         GVV  S  GG   
Sbjct: 53  DFDAAEHLPGRLLPQTDRMTRLALAAADWALADAGVDPAAL-PPYDMGVVTASAAGGFEF 111

Query: 122 IVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQLRGPNHAVTTACSSGAHAIGDA 181
                  L   GPR +S +       ++ +G ISIR+ +RGP+  V    + G  A+  A
Sbjct: 112 GQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQA 171

Query: 182 SRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRDGFVMG 241
            RL+  G   ++V+GG ++ +C  G  +  +   LST  +DDP RA  PFD    G+V G
Sbjct: 172 RRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYLPFDAAAAGYVPG 228

Query: 242 EGAGALVLEDLEHAKARGAKIYSEIIGYGLSGDAFHITMPPEDGNGA--YRCMSSAIARA 299
           EG   LVLED   A+ RGA++Y EI GY  + D      PP  G      R +  A+A A
Sbjct: 229 EGGAILVLEDAAAARERGARVYGEIAGYAATFDP-----PPGSGRPPGLARAIRLALADA 283

Query: 300 KLLPSDIDYINAHGTST-IADTIELGAVERLMGDSCYHVSMSSTKSAMGHLLGAAGAVEA 358
            L P D+D + A        D  E  A+  + G     V +++ K+  G L      ++ 
Sbjct: 284 GLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP--RGVPVTAPKTMTGRLYAGGAPLDV 341

Query: 359 AICNLAIRDGIVPATLNLDNPAKKTFIDLVPHRAIKKNVNVAMSNSFGFGGTNVSLV 415
           A   LA+RDG++P T+N+ +      +DLV  R     +  A+  + G GG N +LV
Sbjct: 342 ATALLALRDGVIPPTVNVTDVPPAYGLDLVTGRPRPAALRTALVLARGRGGFNSALV 398