HHSEARCH alignment of GI: 254780534 and SCOP domain: d2pnga1

Alignment
>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.68  E-value=2e-09  Score=71.21  Aligned_cols=69  Identities=22%  Similarity=0.259  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf             99999999998369999884878674542065710099999999998388348889850588999999999
Q gi|254780534|r    9 FEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIR   79 (85)
Q Consensus         9 ~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~   79 (85)
                      ..++.+++++.+...++++|.++.+|. ++|+|||..+++...++++||+++|..++.+ .|++.+..+..
T Consensus         6 e~~l~~~va~~Lgi~~~~~I~~~~~f~-~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~-~Ti~~L~el~a   74 (76)
T d2pnga1           6 QRDLVKAVAHILGIRDLAGINLDSSLA-DLGLDSLMGVEVRQILEREHDLVLPIREVRQ-LTLRKLQEMSS   74 (76)
T ss_dssp             CCCGGGTHHHHHTCSSCTTSCSSSCHH-HHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT-CCSHHHHHTSC
T ss_pred             HHHHHHHHHHHHCCCCHHHCCCCCCHH-HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH-HHHHHHHHHHH
T ss_conf             999999999995669774579998988-8487479999999999998577889999997-65999999975


SCOP domain information

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Type I fatty acid synthase ACP domain
species: Rat (Rattus norvegicus) [TaxId: 10116]