Query gi|254780534|ref|YP_003064947.1| acyl carrier protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 85
No_of_seqs 105 out of 1696
Neff 6.9
Searched_HMMs 13730
Date Wed Jun 1 09:41:59 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780534.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t8ka_ a.28.1.1 (A:) Acyl car 99.8 1.3E-18 9.6E-23 122.6 8.3 75 7-82 2-76 (77)
2 d1klpa_ a.28.1.1 (A:) Acyl car 99.7 1.6E-17 1.2E-21 116.5 9.1 83 1-84 1-83 (115)
3 d1f80d_ a.28.1.1 (D:) Acyl car 99.7 1.1E-17 7.9E-22 117.5 5.5 74 5-79 1-74 (74)
4 d1vkua_ a.28.1.1 (A:) Acyl car 99.6 1.7E-15 1.2E-19 105.2 7.5 81 2-84 3-83 (85)
5 d1dv5a_ a.28.1.3 (A:) apo-D-al 99.5 4.9E-15 3.6E-19 102.6 3.5 78 4-82 1-80 (80)
6 d1nq4a_ a.28.1.1 (A:) Oxytetra 99.4 1.2E-13 9E-18 94.7 6.3 80 2-83 3-82 (95)
7 d2jq4a1 a.28.1.1 (A:1-83) Hypo 99.4 1.1E-12 7.9E-17 89.5 7.9 76 8-84 1-79 (83)
8 d2af8a_ a.28.1.1 (A:) Actinorh 99.3 2.7E-13 2E-17 92.8 3.7 79 3-83 5-83 (86)
9 d1or5a_ a.28.1.1 (A:) Frenolic 99.2 4.9E-12 3.6E-16 85.8 5.1 75 9-84 5-81 (82)
10 d2gdwa1 a.28.1.2 (A:8-83) Pept 98.7 1.3E-08 9.7E-13 66.6 6.4 71 5-79 5-75 (76)
11 d2pnga1 a.28.1.1 (A:1-76) Type 98.7 2E-09 1.4E-13 71.2 1.5 69 9-79 6-74 (76)
12 d2gyc31 a.108.1.1 (3:2-48) Rib 71.2 1.1 7.8E-05 22.3 2.3 22 41-62 14-35 (47)
13 d2oaia1 d.145.1.4 (A:5-91) Hem 57.0 3.2 0.00024 19.6 2.5 31 49-79 21-51 (87)
14 d1v32a_ a.42.1.1 (A:) Hypothet 48.6 6 0.00043 18.1 2.7 57 2-58 34-92 (101)
15 d1dd3a1 a.108.1.1 (A:1-57) Rib 41.9 5.7 0.00042 18.2 1.8 24 39-62 12-35 (57)
16 d2plia1 d.145.1.4 (A:5-88) Unc 38.1 8.5 0.00062 17.2 2.2 28 49-79 21-48 (84)
17 d2o1ra1 d.145.1.4 (A:1-78) Hyp 34.5 11 0.00078 16.7 2.2 27 49-78 16-42 (78)
18 d2rk5a1 d.145.1.4 (A:5-88) Put 34.1 13 0.00091 16.3 2.5 27 49-78 16-42 (84)
19 d2r2za1 d.145.1.4 (A:5-88) Put 33.9 10 0.00073 16.8 2.0 27 49-78 19-45 (84)
20 d2o3ga1 d.145.1.4 (A:180-255) 32.0 5.6 0.00041 18.2 0.5 31 49-80 11-41 (76)
21 d2c5ra1 a.251.1.1 (A:66-129) E 28.9 18 0.0013 15.3 4.7 35 49-83 9-48 (64)
22 d1h99a1 a.142.1.1 (A:54-168) T 27.6 19 0.0014 15.2 3.2 25 44-68 79-103 (115)
23 d2p13a1 d.145.1.4 (A:431-515) 25.5 16 0.0012 15.7 1.9 29 49-78 21-49 (85)
24 d2p3ha1 d.145.1.4 (A:5-102) Un 25.1 21 0.0015 15.0 2.4 27 49-78 19-45 (98)
25 d2icga1 d.369.1.1 (A:1-158) Un 24.9 21 0.0016 15.0 2.4 19 45-63 27-45 (158)
26 d3deda1 d.145.1.4 (A:341-427) 24.5 22 0.0016 14.9 2.5 31 49-79 19-51 (87)
27 d2prva1 d.369.1.1 (A:1-152) Un 24.5 22 0.0016 14.9 2.4 41 8-63 2-42 (152)
28 d2plsa1 d.145.1.4 (A:345-428) 23.0 18 0.0013 15.4 1.7 31 49-79 17-48 (84)
29 d1h99a2 a.142.1.1 (A:169-275) 21.0 26 0.0019 14.5 3.2 21 45-65 75-95 (107)
No 1
>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]}
Probab=99.75 E-value=1.3e-18 Score=122.58 Aligned_cols=75 Identities=51% Similarity=0.784 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 9999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 7 DVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 7 ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
+|+++|++|+++.+ ++++++++++++|.+|||||||+.+|++..+|++||++||++++.++.||+++++||++|+
T Consensus 2 ~I~~~v~~iia~~l-~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~~ 76 (77)
T d1t8ka_ 2 TIEERVKKIIGEQL-GVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ 76 (77)
T ss_dssp CHHHHHHHHHHHHH-TCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHH-CCCHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCC
T ss_conf 39999999999998-8898776999860120244624899999999998689989999871899999999998760
No 2
>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.71 E-value=1.6e-17 Score=116.49 Aligned_cols=83 Identities=28% Similarity=0.564 Sum_probs=79.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 98785899999999999983699998848786745420657100999999999983883488898505889999999998
Q gi|254780534|r 1 MPNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRK 80 (85)
Q Consensus 1 M~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~ 80 (85)
|+||++++.++|++++++.+ ++++++|.++++|.+|||+|||..++++..+|++||+.||...+.++.||+++++||.+
T Consensus 1 m~~t~~~i~~~l~~iv~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~ 79 (115)
T d1klpa_ 1 MPVTQEEIIAGIAEIIEEVT-GIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQK 79 (115)
T ss_dssp CCCCHHHHHHHHHHHHHHHT-CCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 99899999999999999997-88900068640045531653609999999999998899999999867259999999999
Q ss_pred HHHC
Q ss_conf 5537
Q gi|254780534|r 81 AKQT 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+.+.
T Consensus 80 ~~~~ 83 (115)
T d1klpa_ 80 LEEE 83 (115)
T ss_dssp HHSS
T ss_pred HHCC
T ss_conf 7135
No 3
>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]}
Probab=99.69 E-value=1.1e-17 Score=117.45 Aligned_cols=74 Identities=49% Similarity=0.759 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 589999999999998369999884878674542065710099999999998388348889850588999999999
Q gi|254780534|r 5 NDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIR 79 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~ 79 (85)
+.++.++|++|+++.+ ++++++++++++|.+|||+|||+.++++..+|++||++||++++.+++||+++++||+
T Consensus 1 s~dv~~~v~~iia~~l-~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~ie 74 (74)
T d1f80d_ 1 SADTLERVTKIIVDRL-GVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQ 74 (74)
T ss_dssp CCHHHHHHHHHHHHHS-SCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHH-CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHC
T ss_conf 9689999999999998-8499886987317774375286799999999998689989999863999999999879
No 4
>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]}
Probab=99.58 E-value=1.7e-15 Score=105.17 Aligned_cols=81 Identities=32% Similarity=0.537 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
.|.++++.+++++++++.+ +++++.+.++++| .|||+||++.++++..+|++||++||.+++.++.||+++++||.++
T Consensus 3 ~m~~~~i~~~l~~iv~~~l-~~~~~~i~~~~~~-~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~ 80 (85)
T d1vkua_ 3 HMERKKLIAKFVEIASEKM-GKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKK 80 (85)
T ss_dssp TTHHHHHHHHHHHHHHHTT-CCCCCSCCTTSBT-TTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCHHHCCCCCCH-HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHH
T ss_conf 8999999999999999887-8899887999988-8865854689999999997806887999998817899999999998
Q ss_pred HHC
Q ss_conf 537
Q gi|254780534|r 82 KQT 84 (85)
Q Consensus 82 ~~~ 84 (85)
.+.
T Consensus 81 ~~~ 83 (85)
T d1vkua_ 81 LEE 83 (85)
T ss_dssp HHH
T ss_pred HHC
T ss_conf 746
No 5
>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}
Probab=99.49 E-value=4.9e-15 Score=102.59 Aligned_cols=78 Identities=14% Similarity=0.228 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH--CCCCHHHHHHHHHHH
Q ss_conf 858999999999999836999988487867454206571009999999999838834888985--058899999999985
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESAN--KILTVKDAVDFIRKA 81 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~--~~~Tv~dlv~~I~~~ 81 (85)
++++|..+|+.++++.+ +.++..+.++++|.+++|+|||..++++..+|++||++||.+++. ++.||+.+++||.+.
T Consensus 1 s~e~I~~~v~~il~~~l-~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~l 79 (80)
T d1dv5a_ 1 ADEAIKNGVLDILADLT-GSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHH-TSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHH-CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHC
T ss_conf 90799999999999995-65433247886644468887899999999999998898888996487378999999999983
Q ss_pred H
Q ss_conf 5
Q gi|254780534|r 82 K 82 (85)
Q Consensus 82 ~ 82 (85)
|
T Consensus 80 q 80 (80)
T d1dv5a_ 80 Q 80 (80)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 6
>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]}
Probab=99.42 E-value=1.2e-13 Score=94.74 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=73.8
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
++|.+++...+++++.+. .+++++.+.++++|. +||+|||+.++++..+|++||++||.+.+.++.|++++++||..+
T Consensus 3 ~~t~d~l~~~lre~~~~~-~~~~~~~i~~d~~f~-dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~ 80 (95)
T d1nq4a_ 3 LLTLSDLLTLLRECAGEE-ESIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNAS 80 (95)
T ss_dssp CCCHHHHHHHHHHHHTCS-STTCSCSCCSSSCHH-HHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH-HCCCHHHCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
T ss_conf 247999999999998677-188811133688998-819849899999999998745777899995389999999999975
Q ss_pred HH
Q ss_conf 53
Q gi|254780534|r 82 KQ 83 (85)
Q Consensus 82 ~~ 83 (85)
..
T Consensus 81 l~ 82 (95)
T d1nq4a_ 81 LT 82 (95)
T ss_dssp HH
T ss_pred CC
T ss_conf 55
No 7
>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.36 E-value=1.1e-12 Score=89.46 Aligned_cols=76 Identities=21% Similarity=0.344 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHC-CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH--CCCCHHHHHHHHHHHHHC
Q ss_conf 99999999999836-999988487867454206571009999999999838834888985--058899999999985537
Q gi|254780534|r 8 VFEAVKEVILSQLT-SVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESAN--KILTVKDAVDFIRKAKQT 84 (85)
Q Consensus 8 i~~~v~~ii~~~l~-~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~--~~~Tv~dlv~~I~~~~~~ 84 (85)
+.++|++++++.+. .++++.|.++++|. +||+|||..++++..+|++||++||.+.+. .+.||+.+++||.+.++.
T Consensus 1 i~e~i~~il~~~~~l~~~~~~i~~~~~f~-dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~~~~ 79 (83)
T d2jq4a1 1 MNATIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLILDG 79 (83)
T ss_dssp CHHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCCCHHHCCCCCCHH-HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97899999999985689998859997778-87474089999999999998898899999999886489999999998707
No 8
>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]}
Probab=99.33 E-value=2.7e-13 Score=92.83 Aligned_cols=79 Identities=24% Similarity=0.354 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 78589999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
+|.+++...+++.+.+. .+++++.+.++++|. +||+||++.++++..+|++||+++|.+.+.++.|++++++||.++.
T Consensus 5 ~t~d~l~~~l~e~~~~~-~g~~~~~i~~d~~f~-dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~~l 82 (86)
T d2af8a_ 5 LTTDDLRRALVECAGET-DGTDLSGDFLDLRFE-DIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGAL 82 (86)
T ss_dssp CCHHHHHHHHHHTTCCC-SCCCCSSCSCSSSHH-HHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCC-CCCCCCCCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
T ss_conf 35999999999997630-178932044688998-9199789999999999998746767989971999999999999876
Q ss_pred H
Q ss_conf 3
Q gi|254780534|r 83 Q 83 (85)
Q Consensus 83 ~ 83 (85)
.
T Consensus 83 ~ 83 (86)
T d2af8a_ 83 A 83 (86)
T ss_dssp H
T ss_pred H
T ss_conf 6
No 9
>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]}
Probab=99.22 E-value=4.9e-12 Score=85.76 Aligned_cols=75 Identities=16% Similarity=0.321 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHCCCCH--HHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999998369999--88487867454206571009999999999838834888985058899999999985537
Q gi|254780534|r 9 FEAVKEVILSQLTSVKE--DQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQT 84 (85)
Q Consensus 9 ~~~v~~ii~~~l~~~~~--~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~~ 84 (85)
.+++++++++.+..... ..+.++++| .++|+|||+.+++...+|++||++||++.+.++.|++++++||.....+
T Consensus 5 ~e~l~~il~e~~g~~~~~~~~~d~d~~f-~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~~a~ 81 (82)
T d1or5a_ 5 VDDLKKLLAETAGEDDSVDLAGELDTPF-VDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPAT 81 (82)
T ss_dssp HHHHHHHHHHHSCCCSSCCGGGCSSSCH-HHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCH-HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 9999999999968876666677768589-8819972769999999999984758999987389999999999731548
No 10
>d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]}
Probab=98.71 E-value=1.3e-08 Score=66.56 Aligned_cols=71 Identities=18% Similarity=0.291 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 589999999999998369999884878674542065710099999999998388348889850588999999999
Q gi|254780534|r 5 NDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIR 79 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~ 79 (85)
..+++.++.++.++.+ +++ .+.++.+|. ++|.|||..++++..++++||+.++..++.+..|++++++||.
T Consensus 5 ~~~~E~~l~~i~~~vL-~~~--~i~~~~~f~-~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~ 75 (76)
T d2gdwa1 5 TNAVESKLAEIWERVL-GVS--GIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 75 (76)
T ss_dssp CSHHHHHHHHHHHHHT-TSS--CCCTTTTSS-TTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHC-CCC--CCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHC
T ss_conf 7899999999999993-999--879998977-7189738899999999999889988999984999999998864
No 11
>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.68 E-value=2e-09 Score=71.21 Aligned_cols=69 Identities=22% Similarity=0.259 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 99999999998369999884878674542065710099999999998388348889850588999999999
Q gi|254780534|r 9 FEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIR 79 (85)
Q Consensus 9 ~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~ 79 (85)
..++.+++++.+...++++|.++.+|. ++|+|||..+++...++++||+++|..++.+ .|++.+..+..
T Consensus 6 e~~l~~~va~~Lgi~~~~~I~~~~~f~-~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~-~Ti~~L~el~a 74 (76)
T d2pnga1 6 QRDLVKAVAHILGIRDLAGINLDSSLA-DLGLDSLMGVEVRQILEREHDLVLPIREVRQ-LTLRKLQEMSS 74 (76)
T ss_dssp CCCGGGTHHHHHTCSSCTTSCSSSCHH-HHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT-CCSHHHHHTSC
T ss_pred HHHHHHHHHHHHCCCCHHHCCCCCCHH-HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH-HHHHHHHHHHH
T ss_conf 999999999995669774579998988-8487479999999999998577889999997-65999999975
No 12
>d2gyc31 a.108.1.1 (3:2-48) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=71.25 E-value=1.1 Score=22.25 Aligned_cols=22 Identities=41% Similarity=0.655 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 7100999999999983883488
Q gi|254780534|r 41 DSLDVVELVMIFEEKFSLEIPE 62 (85)
Q Consensus 41 DSLd~vel~~~lE~~f~i~i~~ 62 (85)
--++++||+..+|++||++-..
T Consensus 14 SVmdvveLi~amEEKFGVsaaa 35 (47)
T d2gyc31 14 SVMDVVELISAMEEKFGVSAAA 35 (47)
T ss_dssp CHHHHHHHHHHHHHHTCTTTTH
T ss_pred HHHHHHHHHHHHHHHHCCCHHC
T ss_conf 3999999999999985843211
No 13
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa [TaxId: 2371]}
Probab=56.98 E-value=3.2 Score=19.58 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=25.0
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 9999998388348889850588999999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFIR 79 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~ 79 (85)
+..+++.||+.+|..+-.++.|++.++-...
T Consensus 21 l~dl~~~l~~~l~~~e~~~~~Tl~G~i~~~l 51 (87)
T d2oaia1 21 IEELREVLGAELPDGEENNYHTLAGMCISYF 51 (87)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9999998788998643456315999999986
No 14
>d1v32a_ a.42.1.1 (A:) Hypothetical protein AT5G08430 (rafl09-47-k03) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=48.63 E-value=6 Score=18.09 Aligned_cols=57 Identities=12% Similarity=0.199 Sum_probs=46.4
Q ss_pred CCCHHHHHHHHHHHHHHHHC--CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 87858999999999999836--9999884878674542065710099999999998388
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLT--SVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSL 58 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~--~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i 58 (85)
.++..++..+|-+.|.++=- ..+...|.+|..|..=+|.+.+.+.+|.-.+..+|--
T Consensus 34 ~~sR~eVtk~iw~YIK~nnLqdp~nkr~I~~D~~L~~Lfg~~~v~~f~i~k~l~~H~~~ 92 (101)
T d1v32a_ 34 MISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKE 92 (101)
T ss_dssp CCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCS
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCC
T ss_conf 57799999999999998167887667877667999998588964688799999987587
No 15
>d1dd3a1 a.108.1.1 (A:1-57) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=41.94 E-value=5.7 Score=18.19 Aligned_cols=24 Identities=25% Similarity=0.373 Sum_probs=18.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 657100999999999983883488
Q gi|254780534|r 39 GADSLDVVELVMIFEEKFSLEIPE 62 (85)
Q Consensus 39 g~DSLd~vel~~~lE~~f~i~i~~ 62 (85)
++.-+...||+-.+|++||++-..
T Consensus 12 ~~tv~El~ELvKalEekfGVsAaa 35 (57)
T d1dd3a1 12 KLTVSELAELVKKLEDKFGVTAAA 35 (57)
T ss_dssp TSCHHHHHHHHHHHHHHHCHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 552999999999999986854000
No 16
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=38.14 E-value=8.5 Score=17.22 Aligned_cols=28 Identities=18% Similarity=0.013 Sum_probs=21.6
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 9999998388348889850588999999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFIR 79 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~ 79 (85)
+..+++.||+.+|++ ++.|++.++-...
T Consensus 21 l~dl~~~~~~~l~~~---~~~TigG~i~~~l 48 (84)
T d2plia1 21 IEDINTFFGTEYSSE---EADTIGGLVIQEL 48 (84)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCHHHHHHHHHHH
T ss_conf 999999869899854---4178999999971
No 17
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=34.51 E-value=11 Score=16.68 Aligned_cols=27 Identities=15% Similarity=0.103 Sum_probs=20.8
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+++|++ ++.|++.++-..
T Consensus 16 l~dl~~~l~~~l~~~---~~~Ti~G~v~~~ 42 (78)
T d2o1ra1 16 LRDLNKMFNWELDTE---DARTFNGLILEH 42 (78)
T ss_dssp HHHHHHHHCCCCCCS---SCSBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCHHHHHHHHHH
T ss_conf 999999879799975---405799999997
No 18
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=34.12 E-value=13 Score=16.29 Aligned_cols=27 Identities=15% Similarity=0.127 Sum_probs=21.0
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|++ ++.|++.++-..
T Consensus 16 l~dl~~~l~~~l~~~---~~dTlgG~v~~~ 42 (84)
T d2rk5a1 16 LNDFNEYFETDLESD---NVDTIAGFYLTG 42 (84)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCHHHHHHHHHH
T ss_conf 999999869996546---614299999998
No 19
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=33.86 E-value=10 Score=16.84 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=20.8
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|++ ++.|++.++-..
T Consensus 19 l~dl~~~l~~~l~~~---~~~TigG~i~~~ 45 (84)
T d2r2za1 19 IDEFNEVFETDLHMS---DVDTMAGYLITA 45 (84)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCHHHHHHHHHH
T ss_conf 999999879699976---614499999998
No 20
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=31.97 E-value=5.6 Score=18.22 Aligned_cols=31 Identities=16% Similarity=0.102 Sum_probs=23.4
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999983883488898505889999999998
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFIRK 80 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~ 80 (85)
+..+++.||+.+|+++ .++.|++.++-....
T Consensus 11 i~dl~~~l~~~~~~~~-~~~~Ti~G~vl~~lg 41 (76)
T d2o3ga1 11 YVELAPQLNLPQQEED-ADFHTVAGLIMEELQ 41 (76)
T ss_dssp HHHHTTTTTCCCCCTT-CSCSBHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCC-CCCCCHHHHHHHHHC
T ss_conf 9999997785998645-553148999999848
No 21
>d2c5ra1 a.251.1.1 (A:66-129) Early protein gp16.7 {Bacteriophage phi-29 [TaxId: 10756]}
Probab=28.86 E-value=18 Score=15.34 Aligned_cols=35 Identities=14% Similarity=0.426 Sum_probs=28.2
Q ss_pred HHHHHHHHCCCCCHHHH-----HCCCCHHHHHHHHHHHHH
Q ss_conf 99999983883488898-----505889999999998553
Q gi|254780534|r 49 VMIFEEKFSLEIPEESA-----NKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~-----~~~~Tv~dlv~~I~~~~~ 83 (85)
+..+=++-||+||-+-+ .+++|=.++.+||+.+|.
T Consensus 9 vLDlYe~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnqR~ 48 (64)
T d2c5ra1 9 VLDLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRT 48 (64)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHTTCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9989987088673899999998633019999999996576
No 22
>d1h99a1 a.142.1.1 (A:54-168) Transcriptional antiterminator LicT {Bacillus subtilis [TaxId: 1423]}
Probab=27.56 E-value=19 Score=15.21 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf 0999999999983883488898505
Q gi|254780534|r 44 DVVELVMIFEEKFSLEIPEESANKI 68 (85)
Q Consensus 44 d~vel~~~lE~~f~i~i~~~~~~~~ 68 (85)
-.-.++..+++.||+++|++++.-+
T Consensus 79 ~a~~~~~~ie~~~~i~i~e~Ei~yi 103 (115)
T d1h99a1 79 IGKEALVMVKNKTGVSLPEDEAGFI 103 (115)
T ss_dssp HHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 9999999999988899999999999
No 23
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=25.53 E-value=16 Score=15.68 Aligned_cols=29 Identities=7% Similarity=0.103 Sum_probs=22.0
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|++. .++.|++.++-..
T Consensus 21 l~dl~~~l~~~l~~e~-~~~~TlgG~i~~~ 49 (85)
T d2p13a1 21 IRKASNLLEHDLVDEA-ERYSTLGGYLLWQ 49 (85)
T ss_dssp HHHHHHHHTSCCCCTT-CCCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCC-CCCEEHHHHHHHH
T ss_conf 9999998887999755-5532799999998
No 24
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=25.06 E-value=21 Score=15.01 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=20.1
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|++ ++.|++.++-..
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~~~~~ 45 (98)
T d2p3ha1 19 LDEVERAIGYELPEG---DYETISGLLFDH 45 (98)
T ss_dssp HHHHHHHHTSCCCCS---SCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCCCHHHHHHHH
T ss_conf 999999879898777---841799999998
No 25
>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918 {Listeria innocua [TaxId: 1642]}
Probab=24.85 E-value=21 Score=14.97 Aligned_cols=19 Identities=32% Similarity=0.627 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHCCCCCHH
Q ss_conf 9999999999838834888
Q gi|254780534|r 45 VVELVMIFEEKFSLEIPEE 63 (85)
Q Consensus 45 ~vel~~~lE~~f~i~i~~~ 63 (85)
.-|.+..+|+++|+++|++
T Consensus 27 t~E~I~~~E~~LG~~lP~~ 45 (158)
T d2icga1 27 TPELIKIYQDALGNEFPET 45 (158)
T ss_dssp CHHHHHHHHHHHTCCCCHH
T ss_pred CHHHHHHHHHHHCCCCCHH
T ss_conf 9999999999978999999
No 26
>d3deda1 d.145.1.4 (A:341-427) Probable hemolysin CV0231 {Chromobacterium violaceum [TaxId: 536]}
Probab=24.55 E-value=22 Score=14.89 Aligned_cols=31 Identities=29% Similarity=0.389 Sum_probs=23.0
Q ss_pred HHHHHHHHCCCCC--HHHHHCCCCHHHHHHHHH
Q ss_conf 9999998388348--889850588999999999
Q gi|254780534|r 49 VMIFEEKFSLEIP--EESANKILTVKDAVDFIR 79 (85)
Q Consensus 49 ~~~lE~~f~i~i~--~~~~~~~~Tv~dlv~~I~ 79 (85)
+-.+++.||+.+| +++-.++.|++.++-...
T Consensus 19 l~dl~~~~~~~l~~~~~~~~~~~TlgG~il~~l 51 (87)
T d3deda1 19 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQL 51 (87)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 999999869988877443555127999999986
No 27
>d2prva1 d.369.1.1 (A:1-152) Uncharacterized protein YobK {Bacillus subtilis [TaxId: 1423]}
Probab=24.45 E-value=22 Score=14.88 Aligned_cols=41 Identities=24% Similarity=0.384 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999999999836999988487867454206571009999999999838834888
Q gi|254780534|r 8 VFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEE 63 (85)
Q Consensus 8 i~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~ 63 (85)
|..||..+|.+... ...|. -|++ -+-+..+|+++|+++|++
T Consensus 2 ~~~~i~~~i~~~~~---------~~~~~--~gas----~e~I~~~E~~Lg~~LP~~ 42 (152)
T d2prva1 2 IYSKVENFINENKQ---------NAIFT--EGAS----HENIGRIEENLQCDLPNS 42 (152)
T ss_dssp HHHHHHHHHHHHGG---------GCEEC--CCCC----HHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHCCC---------CCCCC--CCCC----HHHHHHHHHHHCCCCCHH
T ss_conf 48999999997251---------11047--9989----999999999968998999
No 28
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=22.97 E-value=18 Score=15.39 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=22.9
Q ss_pred HHHHHHHHCCCCCHH-HHHCCCCHHHHHHHHH
Q ss_conf 999999838834888-9850588999999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEE-SANKILTVKDAVDFIR 79 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~-~~~~~~Tv~dlv~~I~ 79 (85)
+..+++.||+.+|.+ +-.++.|++.++-...
T Consensus 17 l~dl~~~l~~~~~~~~e~~~~~Tl~G~i~~~l 48 (84)
T d2plsa1 17 VPELKDTLGLRAVPEEEKGVYHTLSGMIMWLL 48 (84)
T ss_dssp HHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999987889986211454348999999976
No 29
>d1h99a2 a.142.1.1 (A:169-275) Transcriptional antiterminator LicT {Bacillus subtilis [TaxId: 1423]}
Probab=20.99 E-value=26 Score=14.48 Aligned_cols=21 Identities=5% Similarity=0.241 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHCCCCCHHHH
Q ss_conf 999999999983883488898
Q gi|254780534|r 45 VVELVMIFEEKFSLEIPEESA 65 (85)
Q Consensus 45 ~vel~~~lE~~f~i~i~~~~~ 65 (85)
+..+...++++||+.+|+++.
T Consensus 75 a~~i~~~i~~~~~~~i~~~Ei 95 (107)
T d1h99a2 75 TKKIQTYIEREYEHKLTSDEL 95 (107)
T ss_dssp HHHHHHHHHHHHCCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
T ss_conf 999999999988899999999
Done!