HHsearch alignment for GI: 254780535 and conserved domain: COG0451
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=99.48 E-value=2.7e-11 Score=92.76 Aligned_cols=209 Identities=20% Similarity=0.213 Sum_probs=144.4
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC-CEE
Q ss_conf 8999389985789999999988997999978989999999972138948999888999999999999999997699-899
Q gi|254780535|r 8 KALVTGASGSIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVNEEMGGV-DIL 86 (247)
Q Consensus 8 ~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i-Dil 86 (247)
T Consensus 2 ~iLVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~----~~---~~~~d~v 68 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDE----LA---KGVPDAV 68 (314)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC------CCCCEEECCCCCHHHHHH----HH---CCCCCEE
T ss_conf 6999928877799999999858997999917875431124------676434225335678998----85---4588789
Q ss_pred EECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCC-----------CCCH--H
Q ss_conf 96789899887544399999999999889999999999999986299849994762338899-----------9857--7
Q gi|254780535|r 87 VNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTGN-----------AGQV--N 153 (247)
Q Consensus 87 VnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~~-----------~~~~--~ 153 (247)
T Consensus 69 ih~aa~~~~~~~~~~---~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~ 141 (314)
T COG0451 69 IHLAAQSSVPDSNAS---DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP 141 (314)
T ss_pred EECCCCCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCH
T ss_conf 988864677533321---4788999999999999999986----799879997875012788788887865578888767
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHC-CCH----HHHHHHHHCCC---CC-------CCCCHHHH
Q ss_conf 89889999999999999963228599634338817934422-898----99999985397---98-------88579999
Q gi|254780535|r 154 YCAAKSGLTGFTKALAQETGRRNVTVNCVAPGFIGSDMTVN-LTE----DQKGKIISSIP---MK-------RMGAVDDI 218 (247)
Q Consensus 154 Y~~sK~ai~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~-~~~----~~~~~~~~~~p---l~-------R~~~pedi 218 (247)
T Consensus 142 Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 218 (314)
T COG0451 142 YGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDV 218 (314)
T ss_pred HHHHHHHHHHHHHHHHH---HCCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHH
T ss_conf 79999999999999766---339957999846378889877742078999999987078850350788622425779999
Q ss_pred HHHHHHHHCHHHCCCCCCEEEECCC
Q ss_conf 9999997388878778868996895
Q gi|254780535|r 219 AAAVLYLSSLEASYVTGQTIHVNGG 243 (247)
Q Consensus 219 a~~v~fL~S~~~~~itG~~i~vDGG 243 (247)
T Consensus 219 ~~~~~~~~~~~~~~----~~ni~~~ 239 (314)
T COG0451 219 ADALLLALENPDGG----VFNIGSG 239 (314)
T ss_pred HHHHHHHHHCCCCC----EEEECCC
T ss_conf 99999997388871----8994698