HHsearch alignment for GI: 254780535 and conserved domain: KOG1200

Probab=100.00  E-value=0  Score=444.09  Aligned_cols=244  Identities=41%  Similarity=0.640  Sum_probs=236.1

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             78877899938998578999999998899799997898999999997213894899988899999999999999999769
Q gi|254780535|r    3 DLTGKKALVTGASGSIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVNEEMGG   82 (247)
Q Consensus         3 ~l~~K~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   82 (247)
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200          11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             HHHCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf             87462248734875077999999974696799750322447999862688776523530467578899999999984299


Q ss_pred             CCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCHHHCCCCCCCHHHHHHHHH
Q ss_conf             989996789899887544399999999999889999999999999986--299849994762338899985778988999
Q gi|254780535|r   83 VDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIR--NRFGRVINITSVVGFTGNAGQVNYCAAKSG  160 (247)
Q Consensus        83 iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~--~~~G~IInisS~~~~~~~~~~~~Y~~sK~a  160 (247)
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G  170 (256)
T KOG1200          91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG  170 (256)
T ss_pred             CCEEEECCCCCCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCHHHHHHCCC
T ss_conf             72899757646530201324888888997512136788899999999716798438864452102456552234453275


Q ss_pred             HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEE
Q ss_conf             99999999999632285996343388179344228989999998539798885799999999997388878778868996
Q gi|254780535|r  161 LTGFTKALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGKIISSIPMKRMGAVDDIAAAVLYLSSLEASYVTGQTIHV  240 (247)
Q Consensus       161 i~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~~~~itG~~i~v  240 (247)
T Consensus       171 vIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~ev  250 (256)
T KOG1200         171 VIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEV  250 (256)
T ss_pred             EEEEEHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf             55300988998865482476761431168125443878999997558764458889987899988154423321516998


Q ss_pred             CCCEEC
Q ss_conf             895041
Q gi|254780535|r  241 NGGMAM  246 (247)
Q Consensus       241 DGG~~~  246 (247)
T Consensus       251 tGGl~m  256 (256)
T KOG1200         251 TGGLAM  256 (256)
T ss_pred             ECCCCC
T ss_conf             346349