HHsearch alignment for GI: 254780535 and conserved domain: KOG1372

Probab=95.72  E-value=0.031  Score=34.50  Aligned_cols=211  Identities=17%  Similarity=0.123  Sum_probs=120.2

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             7789993899857899999999889979999789-----8999999997213--89489998889999999999999999
Q gi|254780535|r    6 GKKALVTGASGSIGLAIAKILYKQGASVGLHGTS-----QEKLEKVAKNFDD--VDRFLLFPANFSDRVSVEYLSKRVNE   78 (247)
Q Consensus         6 ~K~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~--~g~~~~~~~Dv~~~~~~~~~~~~~~~   78 (247)
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik-  106 (376)
T KOG1372          28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK-  106 (376)
T ss_pred             CEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCC-
T ss_conf             4179996236887269999987088567678860466534557776458400256404785345554388999986058-


Q ss_pred             HHCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CCEEEEECCHHHCCC
Q ss_conf             976998999678989988754439999999999988999999999999998629-----------984999476233889
Q gi|254780535|r   79 EMGGVDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNR-----------FGRVINITSVVGFTG  147 (247)
Q Consensus        79 ~~g~iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~-----------~G~IInisS~~~~~~  147 (247)
T Consensus       107 ----PtEiYnLaAQSHVkvSFdlp----eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~P-QsE~TP  177 (376)
T KOG1372         107 ----PTEVYNLAAQSHVKVSFDLP----EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIP-QSETTP  177 (376)
T ss_pred             ----CHHHHHHHHHCCEEEEECCC----HHHEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCC-CCCCCC
T ss_conf             ----25541120003267985142----210001020043589899861645452688525276546654687-556888


Q ss_pred             CCCCHHHHHHHHHHHHHH---HHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHH---------HHHCCCCCCCCCH
Q ss_conf             998577898899999999---9999996322859963433881793442289899999---------9853979888579
Q gi|254780535|r  148 NAGQVNYCAAKSGLTGFT---KALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGK---------IISSIPMKRMGAV  215 (247)
Q Consensus       148 ~~~~~~Y~~sK~ai~~lt---k~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~---------~~~~~pl~R~~~p  215 (247)
T Consensus       178 FyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372         178 FYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             CCCCCHHHHHHHEEEEEEEEHHHHHCCEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCCCHH
T ss_conf             88898557764410589988488412013131765477876665313578888887852132225763470342023306


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999973
Q gi|254780535|r  216 DDIAAAVLYLS  226 (247)
Q Consensus       216 edia~~v~fL~  226 (247)
T Consensus       258 ~dYVEAMW~mL  268 (376)
T KOG1372         258 GDYVEAMWLML  268 (376)
T ss_pred             HHHHHHHHHHH
T ss_conf             77999999997