HHsearch alignment for GI: 254780535 and conserved domain: PRK08125
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated.
Probab=97.14 E-value=0.025 Score=35.13 Aligned_cols=212 Identities=15% Similarity=0.181 Sum_probs=143.0
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 789993899857899999999889-9799997898999999997213894899988899999999999999999769989
Q gi|254780535|r 7 KKALVTGASGSIGLAIAKILYKQG-ASVGLHGTSQEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVNEEMGGVDI 85 (247)
Q Consensus 7 K~~lITG~~~GIG~~ia~~la~~G-a~V~i~~r~~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 85 (247)
T Consensus 316 ~~vlilgvngfig~hl~~~~l~~~~~~v~g~d~~~~~i~~~----~~~p~~~f~~gdi~~~---~~wie~~ik---kcdv 385 (660)
T PRK08125 316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----LGHPRFHFVEGDISIH---SEWIEYHIK---KCDV 385 (660)
T ss_pred EEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH----HCCCCEEEEECCCHHH---HHHHHHHHH---HCCE
T ss_conf 27999834413678999998503885899886575345575----3499548881561466---899998875---4576
Q ss_pred EEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH--HHCCCC---------------
Q ss_conf 996789899887544399999999999889999999999999986299849994762--338899---------------
Q gi|254780535|r 86 LVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSV--VGFTGN--------------- 148 (247)
Q Consensus 86 lVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~--~~~~~~--------------- 148 (247)
T Consensus 386 vlplvaiatp~~y~~~pl~vfeldfe~nl~----ivr~c~ky-----~kriifpstsevygm~~d~~f~ed~s~li~gpi 456 (660)
T PRK08125 386 VLPLVAIATPIEYTRNPLRVFELDFEENLK----IIRYCVKY-----RKRIIFPSTSEVYGMCTDKYFDEDHSNLIVGPI 456 (660)
T ss_pred EEEEHHHCCHHHHHCCCCEEEEECHHHCCH----HHHHHHHH-----CCEEEECCHHHHCCCCCCCCCCCCCCCCEECCC
T ss_conf 732055347477634860478732675528----99999974-----877896560551014788676855566156775
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHH-HCCEEEEECC------CCC--CCHH--HHCCCHHHHHHHHHCCCCC------
Q ss_conf -98577898899999999999999632-2859963433------881--7934--4228989999998539798------
Q gi|254780535|r 149 -AGQVNYCAAKSGLTGFTKALAQETGR-RNVTVNCVAP------GFI--GSDM--TVNLTEDQKGKIISSIPMK------ 210 (247)
Q Consensus 149 -~~~~~Y~~sK~ai~~ltk~lA~e~~~-~gIrvN~IaP------G~i--~T~~--~~~~~~~~~~~~~~~~pl~------ 210 (247)
T Consensus 457 ~~~RWiYs~sKqlldrvi~----Ayg~~~gL~ftlfRpFNw~GPrld~~~~~~~gs~r~itq~i~nl~~g~pi~lvdgG~ 532 (660)
T PRK08125 457 NKQRWIYSVSKQLLDRVIW----AYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGA 532 (660)
T ss_pred CCCHHHHHHHHHHHHHHHH----HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCC
T ss_conf 5543578778999889999----877653994699801455588877555533477541999999997699856854873
Q ss_pred ---CCCCHHHHHHHHHHHHCHHHCCCCCCEEEEC
Q ss_conf ---8857999999999973888787788689968
Q gi|254780535|r 211 ---RMGAVDDIAAAVLYLSSLEASYVTGQTIHVN 241 (247)
Q Consensus 211 ---R~~~pedia~~v~fL~S~~~~~itG~~i~vD 241 (247)
T Consensus 533 QkR~Ft~I~Dgieal~~ii~n~~~~~~g~I~NiG 566 (660)
T PRK08125 533 QKRCFTDIRDGIEALFRIIENRGNRCDGQIINIG 566 (660)
T ss_pred EEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 0588876677999999998494555566068758