HHsearch alignment for GI: 254780535 and conserved domain: PRK08643

Probab=100.00  E-value=0  Score=503.26  Aligned_cols=241  Identities=29%  Similarity=0.456  Sum_probs=229.5

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCC-CEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             7789993899857899999999889979999789899999999721389-489998889999999999999999976998
Q gi|254780535|r    6 GKKALVTGASGSIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDDVD-RFLLFPANFSDRVSVEYLSKRVNEEMGGVD   84 (247)
Q Consensus         6 ~K~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~g-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   84 (247)
T Consensus         2 nKvalVTGg~~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAKAAADKLSSDGGKAIAVKADVSNRDQVFDAVQQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             84999957578899999999998799999996988999999999985399099998058999999999999999829987


Q ss_pred             EEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             999678989988754439999999999988999999999999998629-9849994762338899985778988999999
Q gi|254780535|r   85 ILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNR-FGRVINITSVVGFTGNAGQVNYCAAKSGLTG  163 (247)
Q Consensus        85 ilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~-~G~IInisS~~~~~~~~~~~~Y~~sK~ai~~  163 (247)
T Consensus        82 iLVNnAG~~~~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~~~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~  161 (256)
T PRK08643         82 VVVNNAGLAPTTPIDTITEEQFKKVYGINVGGVIWGIQAAQEQFKKLGHGGKIINATSQAGVEGNPGLSVYGSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHH
T ss_conf             99989988999882559999999999997636899999999999982899279998321013589984899999999999


Q ss_pred             HHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHH-----------HHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCC
Q ss_conf             99999999632285996343388179344228989-----------9999985397988857999999999973888787
Q gi|254780535|r  164 FTKALAQETGRRNVTVNCVAPGFIGSDMTVNLTED-----------QKGKIISSIPMKRMGAVDDIAAAVLYLSSLEASY  232 (247)
Q Consensus       164 ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~-----------~~~~~~~~~pl~R~~~pedia~~v~fL~S~~~~~  232 (247)
T Consensus       162 ltkslA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipl~R~g~pedia~~v~fL~S~~s~~  241 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHEVGENAGKPDEWGMEQFAKDITLKRLSEPEDVANVVSFLAGPDSDY  241 (256)
T ss_pred             HHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCC
T ss_conf             99999999877591899996066887045667788787628975899999983599999868999999999995935369


Q ss_pred             CCCCEEEECCCEEC
Q ss_conf             78868996895041
Q gi|254780535|r  233 VTGQTIHVNGGMAM  246 (247)
Q Consensus       233 itG~~i~vDGG~~~  246 (247)
T Consensus       242 iTG~~i~VDGGl~~  255 (256)
T PRK08643        242 ITGQTIIVDGGMVF  255 (256)
T ss_pred             CCCCEEEECCCEEE
T ss_conf             35875996638840