HHsearch alignment for GI: 254780535 and conserved domain: PRK10084
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional.
Probab=99.61 E-value=8.7e-13 Score=102.36 Aligned_cols=221 Identities=17% Similarity=0.162 Sum_probs=144.9
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCE-EEEEECC--HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 8999389985789999999988997-9999789--899999999721389489998889999999999999999976998
Q gi|254780535|r 8 KALVTGASGSIGLAIAKILYKQGAS-VGLHGTS--QEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVNEEMGGVD 84 (247)
Q Consensus 8 ~~lITG~~~GIG~~ia~~la~~Ga~-V~i~~r~--~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 84 (247)
T Consensus 2 kILVTGg~GFIGs~l~~~Ll~~~~~~v~~vd~~~~~~~~~~~~-~~~~~~~~~~~~~Di~d~~~l~~~~~~~-----~~D 75 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVSDSERYVFEHADICDRAELDRIFAQH-----QPD 75 (352)
T ss_pred EEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH-HHHCCCCCEEEECCCCCHHHHHHHHHHH-----CCC
T ss_conf 7999751008999999999977998899984798767788888-7630897179985678999999999973-----999
Q ss_pred EEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCC--CEEEEECCHHHCC--C----------
Q ss_conf 9996789899887544399999999999889999999999999986---299--8499947623388--9----------
Q gi|254780535|r 85 ILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIR---NRF--GRVINITSVVGFT--G---------- 147 (247)
Q Consensus 85 ilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~---~~~--G~IInisS~~~~~--~---------- 147 (247)
T Consensus 76 ~ViHlAA~~~~~~s----~~~p~~~~~~Nv~gt~nllea~~~~~~~l~~~~~~~~rfv~~SS~~vYG~~~~p~~~~~~~~ 151 (352)
T PRK10084 76 AVMHLAAESHVDRS----ITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSVE 151 (352)
T ss_pred EEEECCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCCC
T ss_conf 99997734665613----30967865223786999999999986432001354058887101403468888633356655
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHH--HCCCHHHHHHHHHCCC--------
Q ss_conf ---------998577898899999999999999632285996343388179344--2289899999985397--------
Q gi|254780535|r 148 ---------NAGQVNYCAAKSGLTGFTKALAQETGRRNVTVNCVAPGFIGSDMT--VNLTEDQKGKIISSIP-------- 208 (247)
Q Consensus 148 ---------~~~~~~Y~~sK~ai~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~--~~~~~~~~~~~~~~~p-------- 208 (247)
T Consensus 152 ~p~~~e~~~~~p~~~Y~~sK~~~E~l~~~~~~~~---gl~~~i~R~~nvyGP~~~~~~~i~~~i~~~l~g~~i~i~G~G~ 228 (352)
T PRK10084 152 LPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD 228 (352)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---CCCEEEEECCCEECCCCCCCHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 7765578999999989999999999999877651---5876998527530869996036999999998097368817998
Q ss_pred -CCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEECCCE
Q ss_conf -988857999999999973888787788689968950
Q gi|254780535|r 209 -MKRMGAVDDIAAAVLYLSSLEASYVTGQTIHVNGGM 244 (247)
Q Consensus 209 -l~R~~~pedia~~v~fL~S~~~~~itG~~i~vDGG~ 244 (247)
T Consensus 229 ~~Rdf~yV~D~v~a~~~~~~~---~~~g~~yNig~~~ 262 (352)
T PRK10084 229 QIRDWLYVEDHARALYKVVTE---GKAGETYNIGGHN 262 (352)
T ss_pred EEEEEEEHHHHHHHHHHHHHC---CCCCCEEEECCCC
T ss_conf 567129759999999999866---9999959989999