HHsearch alignment for GI: 254780535 and conserved domain: PRK12481
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional.
Probab=100.00 E-value=0 Score=498.64 Aligned_cols=244 Identities=34% Similarity=0.610 Sum_probs=226.0
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 96788778999389985789999999988997999978989999999972138-94899988899999999999999999
Q gi|254780535|r 1 MFDLTGKKALVTGASGSIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDDV-DRFLLFPANFSDRVSVEYLSKRVNEE 79 (247)
Q Consensus 1 m~~l~~K~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~-g~~~~~~~Dv~~~~~~~~~~~~~~~~ 79 (247)
T Consensus 3 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~--~~~~~~~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP--ETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHH--HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 628999989994867689999999999869999997898719--999999975994799991279999999999999998
Q ss_pred HCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHCCCCCCCHHHHHHH
Q ss_conf 76998999678989988754439999999999988999999999999998629-98499947623388999857789889
Q gi|254780535|r 80 MGGVDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNR-FGRVINITSVVGFTGNAGQVNYCAAK 158 (247)
Q Consensus 80 ~g~iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~-~G~IInisS~~~~~~~~~~~~Y~~sK 158 (247)
T Consensus 81 ~g~iDilVNNAG~~~~~~~~~~~~~~w~~~~~vNl~~~~~~~q~~~~~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK 160 (251)
T PRK12481 81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK 160 (251)
T ss_pred CCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHH
T ss_conf 19998999899899999903499999999999983779999999999999856993487402133336889871479999
Q ss_pred HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCC--CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCC
Q ss_conf 9999999999999632285996343388179344228--98999999853979888579999999999738887877886
Q gi|254780535|r 159 SGLTGFTKALAQETGRRNVTVNCVAPGFIGSDMTVNL--TEDQKGKIISSIPMKRMGAVDDIAAAVLYLSSLEASYVTGQ 236 (247)
Q Consensus 159 ~ai~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~~~~itG~ 236 (247)
T Consensus 161 aav~~ltr~lA~e~a~~gIrVN~IaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedia~~v~fL~S~~a~~iTG~ 240 (251)
T PRK12481 161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGY 240 (251)
T ss_pred HHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCC
T ss_conf 99999999999997030969999952888777521103799999999955999998689999999999938253590485
Q ss_pred EEEECCCEEC
Q ss_conf 8996895041
Q gi|254780535|r 237 TIHVNGGMAM 246 (247)
Q Consensus 237 ~i~vDGG~~~ 246 (247)
T Consensus 241 ~i~VDGG~~a 250 (251)
T PRK12481 241 TLAVDGGWLA 250 (251)
T ss_pred EEEECCCHHC
T ss_conf 5897846425