HHsearch alignment for GI: 254780535 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=100.00 E-value=0 Score=517.96 Aligned_cols=243 Identities=34% Similarity=0.584 Sum_probs=233.4
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 88778999389985789999999988997999978989999999972138-94899988899999999999999999769
Q gi|254780535|r 4 LTGKKALVTGASGSIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDDV-DRFLLFPANFSDRVSVEYLSKRVNEEMGG 82 (247)
Q Consensus 4 l~~K~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~-g~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 82 (247)
T Consensus 1 L~gKvalITG~s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~v~~~~~~~G~ 80 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 95199999685768999999999987999999979889999999999953992899994489999999999999997599
Q ss_pred CCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 98999678989988754439999999999988999999999999998629984999476233889998577898899999
Q gi|254780535|r 83 VDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTGNAGQVNYCAAKSGLT 162 (247)
Q Consensus 83 iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~~~~~~~Y~~sK~ai~ 162 (247)
T Consensus 81 iDilvnnAg~~~~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~ 160 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLV 160 (250)
T ss_pred CCEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHH
T ss_conf 97999898889998903499999999999982999999999999999749917999655775768998588999999999
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCC------CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCC
Q ss_conf 999999999632285996343388179344228------98999999853979888579999999999738887877886
Q gi|254780535|r 163 GFTKALAQETGRRNVTVNCVAPGFIGSDMTVNL------TEDQKGKIISSIPMKRMGAVDDIAAAVLYLSSLEASYVTGQ 236 (247)
Q Consensus 163 ~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~------~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~~~~itG~ 236 (247)
T Consensus 161 ~ltk~lA~ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~e~~~~~~~~~~Pl~R~g~pediA~~v~fL~Sd~s~~itG~ 240 (250)
T TIGR03206 161 AFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQ 240 (250)
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCC
T ss_conf 99999999965329189999768888677898764438869999999847998998399999999999958343384588
Q ss_pred EEEECCCEEC
Q ss_conf 8996895041
Q gi|254780535|r 237 TIHVNGGMAM 246 (247)
Q Consensus 237 ~i~vDGG~~~ 246 (247)
T Consensus 241 ~i~VDGG~t~ 250 (250)
T TIGR03206 241 VLSVSGGLTM 250 (250)
T ss_pred EEEECCCEEC
T ss_conf 3886869049