HHsearch alignment for GI: 254780535 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=97.12 E-value=0.026 Score=35.02 Aligned_cols=165 Identities=17% Similarity=0.142 Sum_probs=90.0
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC--
Q ss_conf 877899938998578999999998899-79999789899999999721389489998889999999999999999976--
Q gi|254780535|r 5 TGKKALVTGASGSIGLAIAKILYKQGA-SVGLHGTSQEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVNEEMG-- 81 (247)
Q Consensus 5 ~~K~~lITG~~~GIG~~ia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g-- 81 (247)
T Consensus 176 ~g~~VlV~Ga-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A-~~lGa---~~~i--~~~~~~~----~~~v~~~t~g~ 244 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGA---THTV--NSSGTDP----VEAIRALTGGF 244 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH-HHCCC---EEEE--CCCCCCH----HHHHHHHHCCC
T ss_conf 9988999673-76999999999983991899991988999999-96599---0997--3998788----99999985898
Q ss_pred CCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHH
Q ss_conf 99899967898998875443999999999998899999999999999862998499947623388999857789889999
Q gi|254780535|r 82 GVDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTGNAGQVNYCAAKSGL 161 (247)
Q Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~~~~~~~Y~~sK~ai 161 (247)
T Consensus 245 G~Dvvie~~G~----------~~~~---------------~~al~~~--~~gG~iv~~G~~~~~~~~-~~~~-------- 288 (358)
T TIGR03451 245 GADVVIDAVGR----------PETY---------------KQAFYAR--DLAGTVVLVGVPTPDMTL-ELPL-------- 288 (358)
T ss_pred CCCEEEECCCC----------HHHH---------------HHHHHHH--CCCCEEEEEECCCCCCCC-CCCH--------
T ss_conf 87499999999----------8999---------------9999976--279699999225899732-2269--------
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHH-CCCCCCCCC----HHHHHHHHHHHHC
Q ss_conf 99999999996322859963433881793442289899999985-397988857----9999999999738
Q gi|254780535|r 162 TGFTKALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGKIIS-SIPMKRMGA----VDDIAAAVLYLSS 227 (247)
Q Consensus 162 ~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~~~~-~~pl~R~~~----pedia~~v~fL~S 227 (247)
T Consensus 289 --------~~~~~~~~~i~~s~~~~~---~~~~~~~~~~~li~~g~i~~~~lIt~~~~Le~~~eAfe~~~~ 348 (358)
T TIGR03451 289 --------LDVFGRGGALKSSWYGDC---LPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHA 348 (358)
T ss_pred --------HHHHHCCCEEEEEEECCC---CHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHC
T ss_conf --------999737758999886487---608899999999984979984138999879999999999877