HHsearch results for GI: 254780536 and protein with PDBid: 2c2n_A
>2c2n_A Malonyl COA-acyl carrier protein transacylase; mitochondrial, malonyltrasferase, fatty acid synthase alternative splicing, lipid synthesis; HET: AE4; 1.55A {Homo sapiens}
Probab=100.00 E-value=0 Score=523.17 Aligned_cols=288 Identities=30% Similarity=0.490 Sum_probs=266.7
Q ss_pred CEEEEECCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 9199980873337311589999859999999999998839897898538986783046765034566665478999971-
Q gi|254780536|r 1 MSTVLTFPGQGSQVIGMGRDLYDSFPEARLVFEEVDHTLNQNLSDLMWNGSQEELTATCNAQPALTAVSMAFIRVMEKN- 79 (314)
Q Consensus 1 mk~~f~FpGQGsq~~gM~~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~~Qp~i~~~~~a~~~~l~~~- 79 (314)
.|+|||||||||||+|||++||+ +|.||++++++++++|+++.+.+++++.+.+++|.++||+||++++++++.|++.
T Consensus 25 ~~~VflFpGQGsQ~~gMg~~L~~-~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~l~~t~~~Qpai~~~~~a~~~~l~~~~ 103 (339)
T 2c2n_A 25 QCSVLLFPGQGSQVVGMGRGLLN-YPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHCQPAIFVASLAAVEKLHHLQ 103 (339)
T ss_dssp CCEEEEECCTTCCCTTTTTTTTT-STTHHHHHHHHHHHHSSCHHHHHHHCCHHHHHSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEECCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 80899989606758989999985-96999999999988598999997359877861312684999999999999764347
Q ss_pred ---CCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH----
Q ss_conf ---8876435442466544201222531786502333334568865310011112222212350355311223442----
Q gi|254780536|r 80 ---GLCVKRDISYVAGHSLGEYTALCAAKAFSLSDTIRLVRARGKSMQEAVPPGLGSMVAIIGLDDCVVDSICAQA---- 152 (314)
Q Consensus 80 ---gi~~~~~p~~v~GhSlGE~aAl~~aG~ls~eda~~lv~~R~~~m~~~~~~~~g~M~aV~~~~~~~~~~~~~~~---- 152 (314)
|+ +|++++|||+|||+|+++||++|++|++++++.|+++|++....+.+.|+++++.+.+.++..+.+.
T Consensus 104 ~~~gv----~p~~v~GhSlGE~aAl~aAG~ls~~dal~lv~~R~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (339)
T 2c2n_A 104 PSVIE----NCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHC 179 (339)
T ss_dssp HHHHH----TEEEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCCC----CCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 65587----87533147810599999869986888889999999998852134432246653387999999999888887
Q ss_pred ----HCCCCCEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf ----1135420012232221353033112899988888865310035555432342010203788887422232028776
Q gi|254780536|r 153 ----SRVGICEIANDNGGGQVVISGLQDAVKCAADTCLNKGAKRAVFLPVSAPFHSSLMTPVSKVMKWMLDSVTKQDPVV 228 (314)
Q Consensus 153 ----~~~~~~~ia~~Ns~~q~visG~~~~l~~~~~~~~~~~~~~~~~L~v~~afHs~lm~~~~~~~~~~l~~i~~~~p~i 228 (314)
...+.++|||+|+|+|+||||++++++++.+.+++.++.+.++|+|++|||||+|+|+.++|++.++++.+++|++
T Consensus 180 ~~~~~~~~~v~ia~~Nsp~q~VisG~~~~~~~l~~~l~~~g~~~~~~L~v~~afHs~~m~p~~~~~~~~l~~i~~~~p~i 259 (339)
T 2c2n_A 180 KSLGIENPVCEVSNYLFPDCRVISGHQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLV 259 (339)
T ss_dssp HHTTCSSCCEEEEEEEETTEEEEEEEHHHHHHHHHTGGGGTCCEEEECSCSSCTTSGGGGGGHHHHHHHHHTCCCCCCSS
T ss_pred HHHCCCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 76413476001110378764477463889999999899718742675166777787888899999999985286679986
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH----CCCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf 5420457871001002332222204485019999999997----7998999938987999999987389
Q gi|254780536|r 229 PILPNFCASPVSSIDEISRLLVEQVTGRVRWRETIQWFAN----HGVKSVYEVGSGKVLTGLAKRIDKS 293 (314)
Q Consensus 229 pi~S~~~g~~~~~~~~~~~~l~~ql~~pV~f~~~i~~l~~----~g~~~fiEiGP~~~Lt~l~~~~~~~ 293 (314)
|+|||+||+++++++++++||++|+++||+|.++|+++.+ .|+++|||+|||++|++|+|++++.
T Consensus 260 pv~S~vtg~~~~~~~~~~~~l~~ql~~pV~f~~~i~~l~~~~~~~G~~~fiEiGP~~~Lt~l~k~i~~~ 328 (339)
T 2c2n_A 260 SVYSNVHGHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQ 328 (339)
T ss_dssp EEECTTTSSBCCCGGGHHHHHHHHTTSCEEHHHHHHHHTCCCTTCCCCEEEEESSSSHHHHHHHHHCHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 399898886578888999999997025291999999999853656999999919728999999998775