PSIBLAST alignment of GI: 254780536 and protein with PDB id: 3hhd

>gi|288562972|pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965
>gi|288562973|pdb|3HHD|B Chain B, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965
 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 62/321 (19%), Positives = 106/321 (33%), Gaps = 27/321 (8%)

Query: 5   LTFPGQGSQVIGMGRDLYDSFPEARLVFEEVDHT---LNQNLSDLMWNGSQEELTATCNA 61
               G G+Q  GMG  L       R      D         +S L+ +  +       ++
Sbjct: 496 FICSGMGTQWRGMGLSLM-RLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDDIVHS 554

Query: 62  QPALTAVSMAFIRVMEKNGLCVKRDISYVAGHSLGEYTALCAAKAFSLSDTIRLVRARGK 121
             +LTA+ +  I ++   G         + GHSLGE     A    S  + +     RG+
Sbjct: 555 FVSLTAIQIGLIDLLSCMG----LRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQ 610

Query: 122 SMQEAVPPGLGSMVAIIGLDDCVVDSICAQASRVGICEIANDNGGGQVVISGLQDAVKCA 181
            ++EA  P        +  ++C                 A  N    V ISG Q  V   
Sbjct: 611 CIKEAHLPPGAMAAVGLSWEECKQRCPPGVVP-------ACHNSKDTVTISGPQAPVFEF 663

Query: 182 ADTCLNKGAKRAVFLPVSAPFHSSLMT----PVSKVMKWMLDSVTKQDPVVPILPNFCAS 237
            +    +G            FHS  M     P+ + +K ++     +           A 
Sbjct: 664 VEQLRKEGVFAKEVRTGGMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQ 723

Query: 238 PVSS--IDEISRLLVEQVTGRVRWRETIQWFANHGVKSVYEVGSGKVLTGLAKRIDK-SL 294
             SS      +   V  +   V ++E +     H V  V E+    +L  + KR  K S 
Sbjct: 724 WHSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAV--VLEIAPHALLQAVLKRGLKPSC 781

Query: 295 SAVSI---SKVEDIDLALRSI 312
           + + +      ++++  L  I
Sbjct: 782 TIIPLMKKDHRDNLEFFLAGI 802