RPSBLAST alignment for GI: 254780536 and conserved domain: TIGR03131
>gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. Length = 295
Score = 175 bits (447), Expect = 1e-44
Identities = 98/306 (32%), Positives = 138/306 (45%), Gaps = 13/306 (4%)
Query: 5 LTFPGQGSQVIGMGRDLYDSFPEARLVFEEVDHTLNQNLSDLMWNGSQEELTATCNAQPA 64
L FPGQGSQ GM +L D P V E L + +L E L +T +AQ
Sbjct: 3 LLFPGQGSQRAGMLAELPDH-PAVAAVLAEASDVLGIDPRELD---DAEALASTRSAQLC 58
Query: 65 LTAVSMAFIRVMEKNGLCVKRDISYVAGHSLGEYTALCAAKAFSLSDTIRLVRARGKSMQ 124
+ A +A R + + S VAG+S+GEY A A + D +RLV R M
Sbjct: 59 ILAAGVAAWRALLALL--PRP--SAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMD 114
Query: 125 EAVPPGLGSMVAIIGLDDCVVDSICAQASRVGICEIANDNGGGQVVISGLQDAVKCAADT 184
+AVP G G M+A++GLD V+++ A+ +A N QVVI+G + A++ A+
Sbjct: 115 QAVPGGYG-MLAVLGLDLAAVEALIAKHG----VYLAIINAPDQVVIAGSRAALRAVAEL 169
Query: 185 CLNKGAKRAVFLPVSAPFHSSLMTPVSKVMKWMLDSVTKQDPVVPILPNFCASPVSSIDE 244
GA RA L V P H+ L+ ++ L + P +P L A V +
Sbjct: 170 ARAAGASRAKRLAVRVPSHTPLLAKAAEQFAEALAEIPLAAPRLPYLSGIDARLVRDAAQ 229
Query: 245 ISRLLVEQVTGRVRWRETIQWFANHGVKSVYEVGSGKVLTGLAKRIDKSLSAVSISKVED 304
I L Q+ V W + +Q G + V E+G G VLT LA L A S
Sbjct: 230 IRDDLARQIATPVDWHDCMQAAYERGARLVIELGPGDVLTKLANEAFPELPARSADDFRS 289
Query: 305 IDLALR 310
+D L
Sbjct: 290 LDGLLA 295