RPSBLAST alignment of GI: 254780536 and protein with PDBid: 2cuy
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus HB8} Length = 305
Score = 211 bits (537), Expect = 2e-55
Identities = 133/310 (42%), Positives = 165/310 (53%), Gaps = 9/310 (2%)
Query: 1 MSTVLTFPGQGSQVIGMGRDLYDSFPEARLVFEEVDHTLNQNLSDLMWNGSQEELTATCN 60
M L FPGQGS +GMGR LY++ P A+ V + + L L LMW G +E LT T N
Sbjct: 1 MYAAL-FPGQGSHRVGMGRALYEASPAAKEVLDRAEAAL-PGLLKLMWEGPEEALTLTEN 58
Query: 61 AQPALTAVSMAFIRVMEKNGLCVKRDISYVAGHSLGEYTALCAAKAFSLSDTIRLVRARG 120
QPAL A A R + G AGHSLGE+TA AA L D +RLVR RG
Sbjct: 59 QQPALLAAGYAAYRAFLEAGGKPPA---LAAGHSLGEWTAHVAAGTLELEDALRLVRLRG 115
Query: 121 KSMQEAVPPGLGSMVAIIGLDDCVVDSICAQASRVGICEIANDNGGGQVVISGLQDAVKC 180
+ MQEAVP G G+M A++ L + V EIAN N Q VISG + AV+
Sbjct: 116 RYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGV---EIANLNAPEQTVISGRRQAVEE 172
Query: 181 AADTCLNKGAKRAVFLPVSAPFHSSLMTPVSKVMKWMLDSVTKQDPVVPILPNFCASPVS 240
AA+ + A R VFLPVSAPFHSSLM P K + L V + P P+ N A P
Sbjct: 173 AAERLKERRA-RVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEE 231
Query: 241 SIDEISRLLVEQVTGRVRWRETIQWFANHGVKSVYEVGSGKVLTGLAKRIDKSLSAVSIS 300
+ I LL+EQ+T VRW E ++ GVK E GSG+VL GL R K A+S+
Sbjct: 232 DPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQ 291
Query: 301 KVEDIDLALR 310
+ + AL
Sbjct: 292 DPDSLRKALE 301