HHsearch alignment for GI: 254780537 and conserved domain: TIGR03659
>TIGR03659 IsdE heme ABC transporter, heme-binding protein isdE. This family of ABC substrate-binding proteins is observed primarily in close proximity with proteins localized to the cell wall and bearing the NEAT (NEAr Transporter, pfam05031) heme-binding domain. IsdE has been shown to bind heme and is involved in the process of scavenging heme for the purpose of obtaining iron.
Probab=93.76 E-value=0.63 Score=26.58 Aligned_cols=228 Identities=11% Similarity=0.099 Sum_probs=90.7
Q ss_pred CCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 82899975289999998518914899962688980120227124577603789999887610689999974235575211
Q gi|254780537|r 23 KKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIIT 102 (294)
Q Consensus 23 ~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~ 102 (294)
T Consensus 35 p~RIV~l~~~~~eil~~Lg~~~VGv---~~~~~~------~p~~~k~v~------~vG~~~~pnlE~I~-aLkPDLI-i~ 97 (289)
T TIGR03659 35 EERIVATSVAVTEILDKLDLDLVGV---PTSQKT------LPKRYKDVP------EVGNPMSPDMEKIK-SLKPTVV-LS 97 (289)
T ss_pred CCEEEECCCCHHHHHHHCCCCEEEE---ECCCCC------CHHHHHCCC------CCCCCCCCCHHHHH-HCCCCEE-EE
T ss_conf 9659986863799999869975999---778766------968871857------21887899999997-3699789-95
Q ss_pred CCCCCCHHHHHHCCCCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf 12374202221001233463011122---135678999999999864318889999998998630145533789988630
Q gi|254780537|r 103 VTDGINPIGVSEDTSVDSEPNPHAWM---SLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEK 179 (294)
Q Consensus 103 ~~~~i~~~~~~~~~~~~~~~dpH~Wl---dp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~ 179 (294)
T Consensus 98 -~~~~~~~~~~~-l-~~~~i-~v~~~~~~~~~~i~~~i~~lg~i~g~e--~~-------A~~li~~~~~~l~~i~~~~~~ 164 (289)
T TIGR03659 98 -VTTLEEDLGPK-F-KQLGV-EATFLNLTSVDGMKKSITELGEKYGRE--EQ-------AEKLVKEINEKEAEVKKKVKG 164 (289)
T ss_pred -CCCCHHHHHHH-H-HHCCC-EEEEECCCCHHHHHHHHHHHHHHHCCH--HH-------HHHHHHHHHHHHHHHHHHHCC
T ss_conf -57425878999-9-86097-599983789999999999999983877--88-------999999999999999987346
Q ss_pred CCCCCCEEEEE----------CCCC-HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC-CCHHH
Q ss_conf 78447369982----------6652-145775297288722688640007899999997620169718998278-99799
Q gi|254780537|r 180 VDPEKRWFVTS----------EGCL-VYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSEST-NSDQP 247 (294)
Q Consensus 180 ~p~~~~~~v~~----------H~af-~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~-~~~~~ 247 (294)
T Consensus 165 ~~-~~~v~~~~~~~~~~~~~~~~s~~g~il~~~G~~Nv~~~~~~~~~~~s~-------E~l~~~nPDvI~~~~~~~~~~~ 236 (289)
T TIGR03659 165 KK-KPKVLILMGVPGSYLVATENSYIGDLVKLAGGENVYKGNKQEYLSSNT-------EYLLKANPDIILRAAHGMPDEV 236 (289)
T ss_pred CC-CCEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCH-------HHHHHCCCCEEEEECCCCCHHH
T ss_conf 78-974999993499538845996467899981674202256887554489-------9997609989999557884566
Q ss_pred HHHHHHHH----------CCCEEEEEECCC--CCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 99999982----------993444320123--787778868999999999999986209
Q gi|254780537|r 248 AKQVAYET----------NASYGGVLYVDS--LSKPDGPAPTYLDLLRFSLTKIVDTLF 294 (294)
Q Consensus 248 ~~~ia~e~----------~~~~~~~~~~d~--l~~~~~~~~~Y~~~m~~N~~~l~~aL~ 294 (294)
T Consensus 237 ~~~~~~~~~~np~w~~l~AVKn~~Vy~ld~~~~~~~--~~~~~~~~----l~~l~k~ly 289 (289)
T TIGR03659 237 KKMFDEEFKTNDIWKHFEAVKNNRVYDLDEELFGMT--ANLKVAEA----LDELKKMLY 289 (289)
T ss_pred HHHHHHHHHCCCCCCCCCHHCCCCEEEECHHHHCCC--CCHHHHHH----HHHHHHHHC
T ss_conf 888999986295121698200894799787880779--75779999----999999749