HHsearch alignment for GI: 254780537 and conserved domain: cd01018
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=100.00 E-value=0 Score=449.17 Aligned_cols=254 Identities=25% Similarity=0.383 Sum_probs=226.9
Q ss_pred CCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCC-HHHHHHHHHCCCCCCC
Q ss_conf 882899975289999998518914899962688980120227124577603789999887610-6899999742355752
Q gi|254780537|r 22 QKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLE-ETYMKYFTNLKKGTKI 100 (294)
Q Consensus 22 ~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E-~~~~~~~~~~~~~~~~ 100 (294)
T Consensus 1 dkp~Vvtsi~pl~~~v~~I~gd~v~V~~Lvp~g~dPH~ye~~psd~~~l~~ADlvv~~G~~lE~~~~~~l~~-~~~~~~v 79 (266)
T cd01018 1 DKPTVAVSIEPQKYFVEKIAGDTVDVVVLVPPGSNPHTYEPKPQQMKKLSEADLYFRIGLGFEEVWLERFRS-NNPKMQV 79 (266)
T ss_pred CCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHH-CCCCCEE
T ss_conf 998899977799999999839934899806999796468699999999966989999587345889999996-0899828
Q ss_pred CCCCCCCCHHHHHH---------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 11123742022210---------012334630111221356789999999998643188899999989986301455337
Q gi|254780537|r 101 ITVTDGINPIGVSE---------DTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSIL 171 (294)
Q Consensus 101 i~~~~~i~~~~~~~---------~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~ 171 (294)
T Consensus 80 v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~DPH~Wldp~~~~~~a~~Ia~~L~~ldP~~~~~y~~N~~~~~~~L~~L~~ 159 (266)
T cd01018 80 VNMSKGITLIPMADHHHHHHGEHEHHHHGNYDPHIWLSPANAKIMAENIYEALAELDPQNATYYQANLDALLAELDALDS 159 (266)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98678951044566445556654555568999846578676999999999999886935089999999999999999999
Q ss_pred HHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
Q ss_conf 89988630784473699826652145775297288722688640007899999997620169718998278997999999
Q gi|254780537|r 172 PLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQV 251 (294)
Q Consensus 172 ~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~i 251 (294)
T Consensus 160 ~~~~~l~~~--~~~~~v~~Hdaf~Yf~~~ygl~~~~i~--~~~~eps~~~l~~l~~~ik~~~v~~If~E~~~~~k~~~~i 235 (266)
T cd01018 160 EIRTILSKL--KQRAFMVYHPAWGYFARDYGLTQIPIE--EEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFSTKSAEAI 235 (266)
T ss_pred HHHHHHCCC--CCCEEEEECCCHHHHHHHCCCEEEECC--CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
T ss_conf 999973776--787389965447999986798798605--8888989999999999999839989997089990999999
Q ss_pred HHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99829934443201237877788689999999999999
Q gi|254780537|r 252 AYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKI 289 (294)
Q Consensus 252 a~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l 289 (294)
T Consensus 236 a~etg~kv~~---ldpL~~------~~~~~~~~~~~~~ 264 (266)
T cd01018 236 AREIGAKVVT---IDPLAA------DWEENLLKVADAF 264 (266)
T ss_pred HHHHCCCEEE---ECCCCC------CHHHHHHHHHHHH
T ss_conf 9970993799---678640------2799999999874