HHsearch alignment for GI: 254780537 and conserved domain: cd01137
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=100.00 E-value=0 Score=522.88 Aligned_cols=276 Identities=43% Similarity=0.708 Sum_probs=263.4
Q ss_pred CCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 64335882899975289999998518914899962688980120227124577603789999887610689999974235
Q gi|254780537|r 17 ASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKK 96 (294)
Q Consensus 17 ~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~ 96 (294)
T Consensus 11 ~~~~~~k~~Vvtt~~pl~~~v~~I~Gd~v~V~~Lvp~g~dPH~yep~p~d~~~l~~Adliv~~G~~lE~~~~k~~~~~~~ 90 (287)
T cd01137 11 PATAASKLKVVATFSILADIARNIAGDRVNVTSIVPPGADPHEYEPTPSDIKKLSKADLILYNGLNLEPWLERLVKNAGK 90 (287)
T ss_pred CCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCC
T ss_conf 75458996699987699999999818845999821879897568899999999957999998588741789999996066
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 57521112374202221001233463011122135678999999999864318889999998998630145533789988
Q gi|254780537|r 97 GTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTR 176 (294)
Q Consensus 97 ~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~ 176 (294)
T Consensus 91 ~~~~v~~~~~i~~~~~~~-~~~~~~~DPHiWldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~Ld~~~~~~ 169 (287)
T cd01137 91 DVPVVAVSEGIDPIPLEE-GHYKGKPDPHAWMSPKNAIIYVKNIAKALSEADPANAETYQKNAAAYKAKLKALDEWAKAK 169 (287)
T ss_pred CCCEEECCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 898895358843104556-6788999986357999999999999999998682122899999999999999999999999
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHC
Q ss_conf 63078447369982665214577529728872268864000789999999762016971899827899799999999829
Q gi|254780537|r 177 IEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETN 256 (294)
Q Consensus 177 ~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~ 256 (294)
T Consensus 170 l~~vp~~~~~~vt~H~af~Yfa~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~i~~if~E~~~~~k~a~~ia~e~g 249 (287)
T cd01137 170 FATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETG 249 (287)
T ss_pred HHCCCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC
T ss_conf 72487435557851741689998679917764412786666999999999999852997899858999099999999729
Q ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9344432012378777886899999999999998620
Q gi|254780537|r 257 ASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294)
Q Consensus 257 ~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294)
T Consensus 250 ~~v~~~l~~d~l~~~~~~~~tY~~~m~~N~~~l~~aL 286 (287)
T cd01137 250 AKIGGQLYTDSLSEKGGPADTYLDMMEHNLDTIVEGL 286 (287)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9714625655678889983759999999999999864