HHsearch alignment for GI: 254780537 and conserved domain: pfam01297

>pfam01297 SBP_bac_9 Periplasmic solute binding protein family. This family includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum.
Probab=100.00  E-value=0  Score=457.75  Aligned_cols=263  Identities=31%  Similarity=0.513  Sum_probs=244.7

Q ss_pred             EEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99975289999998518914899962688980120227124577603789999887610689999974235575211123
Q gi|254780537|r   26 VLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTD  105 (294)
Q Consensus        26 Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~  105 (294)
T Consensus         1 Vv~t~~pl~~iv~~i~gd~~~V~~l~~~g~dpH~y~~~p~d~~~l~~ADlii~~G~~~E~~l~~~~~~~~~~~~~v~~~~   80 (272)
T pfam01297         1 VVASIPPLADLVKAIGGDKVEVTSLVPPGADPHTYEPTPSDIKKLAKADLVVYNGAGLEPWLDKLLASLANKVKVVDLSE   80 (272)
T ss_pred             CEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCC
T ss_conf             98965799999999808934899806999796577689999999956999999298716789999985689984898357


Q ss_pred             CCCHHHHH--------HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             74202221--------0012334630111221356789999999998643188899999989986301455337899886
Q gi|254780537|r  106 GINPIGVS--------EDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRI  177 (294)
Q Consensus       106 ~i~~~~~~--------~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~  177 (294)
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~l  160 (272)
T pfam01297        81 GIELLDAPGHEHDHDEHDHDDHGHGDPHIWLDPKNAKAMAEAIADALSELDPENAATYEKNAAAFLKKLDELDAEIKAKL  160 (272)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             86555576545655555555678999806268277999999999999986854089999999999999999999999875


Q ss_pred             HCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC
Q ss_conf             30784473699826652145775297288722688640007899999997620169718998278997999999998299
Q gi|254780537|r  178 EKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNA  257 (294)
Q Consensus       178 ~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~  257 (294)
T Consensus       161 ~~~~--~~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~  238 (272)
T pfam01297       161 APIP--GKRVITFHDAFGYFAKAYGLEQIAILGESPESEPSPADLAELIKLIKEHNVKVIFVEPQFSPKLAETLAEETGA  238 (272)
T ss_pred             HCCC--CCEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC
T ss_conf             1347--64389855506999997799275403003567889999999999999849989998389990999999999699


Q ss_pred             CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             344432012378777886899999999999998620
Q gi|254780537|r  258 SYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       258 ~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
T Consensus       239 ~~~-~~~~d~l~~~~--~~~Y~~~m~~n~~~l~~al  271 (272)
T pfam01297       239 KVV-PLYLDPLGSEG--GDTYLELMRHNLDTLAEAL  271 (272)
T ss_pred             CEE-EEECCCCCCCC--CCCHHHHHHHHHHHHHHHC
T ss_conf             768-87357888888--4779999999999999864