Query         gi|254780537|ref|YP_003064950.1| periplasmic solute binding protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 294
No_of_seqs    135 out of 2447
Neff          7.8 
Searched_HMMs 33803
Date          Wed Jun  1 18:23:35 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780537.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1xvl_A Mn transporter, MNTC p 100.0 1.3E-41       0  300.8  13.1  176   20-199    42-217 (231)
  2 >1pq4_A Periplasmic binding pr 100.0 2.7E-40 8.4E-45  291.9  13.6  160   22-181     1-189 (209)
  3 >1toa_A Tromp-1, protein (peri 100.0 2.9E-40 8.4E-45  291.7  13.7  161   20-182    35-195 (195)
  4 >2o1e_A YCDH; alpha-beta prote 100.0   2E-39 5.9E-44  286.1  13.7  166   16-181    14-189 (218)
  5 >3hh8_A Metal ABC transporter  100.0 3.2E-39 9.7E-44  284.6  10.8  173    8-180     2-179 (179)
  6 >3cx3_A Lipoprotein; zinc-bind 100.0 2.4E-38 7.2E-43  278.7  10.9  170   15-185     2-180 (199)
  7 >2prs_A High-affinity zinc upt 100.0   1E-37   3E-42  274.5  12.9  156   25-180     1-172 (172)
  8 >3gi1_A LBP, laminin-binding p 100.0 5.5E-37 1.6E-41  269.5  11.0  167   13-180     2-177 (177)
  9 >3hh8_A Metal ABC transporter   99.9 1.4E-23   4E-28  179.1  12.6  112  182-293     2-113 (115)
 10 >1toa_A Tromp-1, protein (peri  99.9 1.2E-22 3.4E-27  172.9  11.4  111  183-293     1-116 (118)
 11 >3gi1_A LBP, laminin-binding p  99.9 2.5E-22 7.4E-27  170.6  12.9  108  183-293     1-108 (109)
 12 >2prs_A High-affinity zinc upt  99.9 1.9E-21 5.7E-26  164.7   9.2  108  183-293     1-109 (112)
 13 >1xvl_A Mn transporter, MNTC p  99.8 1.6E-18 4.8E-23  144.9   9.9   88  183-270     2-89  (90)
 14 >2o1e_A YCDH; alpha-beta prote  99.7 2.8E-17 8.4E-22  136.5   9.4   82  184-268     1-82  (82)
 15 >1pq4_A Periplasmic binding pr  99.7 7.5E-17 2.2E-21  133.7   9.7   81  184-269     2-82  (82)
 16 >3cx3_A Lipoprotein; zinc-bind  99.7 2.9E-17 8.6E-22  136.4   7.6   84  184-270     1-84  (85)
 17 >2gek_A Phosphatidylinositol m  84.0     2.4   7E-05   22.3   5.1   99   58-165    71-169 (169)
 18 >1yya_A Triosephosphate isomer  83.2     3.4   1E-04   21.2   7.2   75  169-259   142-229 (250)
 19 >3krs_A Triosephosphate isomer  77.5     5.1 0.00015   20.0   7.1   93  169-284   166-269 (271)
 20 >1o5x_A TIM, triosephosphate i  77.2     5.2 0.00015   20.0   8.5  192   26-284    40-246 (248)
 21 >1uqt_A Alpha, alpha-trehalose  76.8     4.7 0.00014   20.2   4.7   95   64-166   115-211 (217)
 22 >1m1n_A Nitrogenase molybdenum  76.7     5.4 0.00016   19.9  11.6  148  128-293    56-223 (248)
 23 >1ney_A TIM, triosephosphate i  76.7     5.1 0.00015   20.0   4.8   75  169-259   142-227 (247)
 24 >3fro_A GLGA glycogen synthase  75.1     4.2 0.00012   20.6   4.0   87   68-165   100-187 (188)
 25 >2j27_A Triosephosphate isomer  74.5     6.1 0.00018   19.5   8.3   91  171-284   145-248 (250)
 26 >3gvg_A Triosephosphate isomer  74.0     6.3 0.00019   19.4   6.3   94  171-286   172-278 (283)
 27 >1mo0_A TIM, triosephosphate i  73.9     6.3 0.00019   19.4   6.4   94  169-285   162-266 (275)
 28 >3jzd_A Iron-containing alcoho  73.4     6.5 0.00019   19.3   7.1   93  171-264    25-121 (161)
 29 >1m6j_A TIM, TPI, triosephosph  72.7     4.7 0.00014   20.3   3.8   92  171-284   152-256 (261)
 30 >2i9e_A Triosephosphate isomer  71.5     7.2 0.00021   19.0   7.1   73  171-259   144-227 (259)
 31 >1tre_A Triosephosphate isomer  70.9     7.4 0.00022   18.9   6.3   85  183-289   159-253 (255)
 32 >3iv7_A Alcohol dehydrogenase   70.1     7.7 0.00023   18.8   7.0   88  176-264    31-120 (160)
 33 >2iw1_A Lipopolysaccharide cor  68.9     8.1 0.00024   18.6   4.9   93   65-166    90-182 (184)
 34 >2v5b_A Triosephosphate isomer  68.1     8.4 0.00025   18.5   6.7  193   41-283    34-241 (244)
 35 >2a3n_A Putative glucosamine-f  67.0     8.8 0.00026   18.4   5.0   80  182-261    53-134 (192)
 36 >2eq5_A 228AA long hypothetica  66.8     3.6 0.00011   21.0   2.2   84  177-260     7-100 (101)
 37 >1m5w_A Pyridoxal phosphate bi  66.7       9 0.00027   18.4   5.8   41  219-262   113-154 (243)
 38 >3gk0_A PNP synthase, pyridoxi  65.1     9.6 0.00028   18.2   5.7   41  219-262   141-182 (278)
 39 >1nri_A Hypothetical protein H  64.8     9.7 0.00029   18.1   6.5  127  125-262    24-173 (233)
 40 >1r2r_A TIM, triosephosphate i  61.5      11 0.00033   17.7   7.0   75  169-259   143-228 (248)
 41 >2btm_A TIM, protein (trioseph  61.1      11 0.00033   17.7   7.1  176   24-259    37-229 (252)
 42 >2vxn_A Triosephosphate isomer  58.8      12 0.00037   17.4   7.0   73  171-259   146-231 (251)
 43 >3hl0_A Maleylacetate reductas  55.6      14 0.00041   17.1   7.4   88  172-263    24-118 (159)
 44 >3hww_A 2-succinyl-5-enolpyruv  53.1      15 0.00045   16.8   4.4   84   21-105    24-116 (148)
 45 >3c5e_A Acyl-coenzyme A synthe  52.0      16 0.00047   16.7   3.5  114  161-284     3-118 (123)
 46 >2bfw_A GLGA glycogen synthase  48.8      18 0.00052   16.4   4.7   87   70-166   113-199 (200)
 47 >2dgd_A 223AA long hypothetica  46.9      19 0.00056   16.2   6.2   65  196-260    20-93  (95)
 48 >1aw2_A Triosephosphate isomer  46.2      19 0.00057   16.1   5.9   83  183-287   161-253 (256)
 49 >2pan_A Glyoxylate carboligase  46.1      19 0.00057   16.1   8.9   85   20-105    21-122 (220)
 50 >1rzu_A Glycogen synthase 1; g  45.0      11 0.00031   17.9   1.6   31   50-80      1-39  (200)
 51 >1ybh_A Acetolactate synthase,  44.5      21 0.00061   15.9   5.6   82   21-104    16-112 (174)
 52 >2vsq_A Surfactin synthetase s  44.4      20 0.00058   16.1   2.9   81  161-248     3-85  (107)
 53 >1vmd_A MGS, methylglyoxal syn  43.7      21 0.00062   15.9   7.0   71  184-260    28-106 (120)
 54 >1iv0_A Hypothetical protein;   43.4      18 0.00054   16.3   2.6   21  219-239    37-57  (98)
 55 >1u11_A PURE (N5-carboxyaminoi  43.0      22 0.00064   15.8   7.0   31   71-103    75-105 (182)
 56 >3eya_A Pyruvate dehydrogenase  42.3      22 0.00066   15.7   6.0   76   21-103    27-117 (180)
 57 >1q6z_A BFD, BFDC, benzoylform  42.2      22 0.00066   15.7   4.0   65   20-86     26-107 (168)
 58 >3ite_A SIDN siderophore synth  42.1      22 0.00065   15.7   2.8   78  161-246     3-82  (113)
 59 >2iht_A Carboxyethylarginine s  41.6      22 0.00066   15.7   2.8   83   20-104    29-133 (170)
 60 >1xmp_A PURE, phosphoribosylam  41.0      23 0.00068   15.6   6.2   30   72-103    66-95  (170)
 61 >3kxq_A Triosephosphate isomer  40.6      23 0.00069   15.5   6.5   77  168-260   167-253 (275)
 62 >1mio_B Nitrogenase molybdenum  40.4      24  0.0007   15.5   3.7   74  184-262     4-100 (109)
 63 >2dp3_A Triosephosphate isomer  40.1      24  0.0007   15.5   6.5   79  183-284   162-251 (257)
 64 >2e5f_A Hypothetical protein P  40.0      21 0.00063   15.8   2.5   86  166-260     3-96  (146)
 65 >1h6q_A TCTP, P23FYP, translat  39.5      24 0.00072   15.4   4.0   39  130-168    85-123 (168)
 66 >1gqe_A Release factor 2, RF2;  39.5      24 0.00072   15.4   5.0   22  122-143    42-63  (120)
 67 >1h0h_A Formate dehydrogenase   39.1      25 0.00073   15.4   7.1  152   64-244    20-182 (216)
 68 >2wvv_A Alpha-L-fucosidase; al  39.0      25 0.00073   15.4   3.7   23  217-239   294-316 (351)
 69 >1ozh_A ALS, acetolactate synt  38.8      25 0.00074   15.4   4.7  112   20-144    20-149 (180)
 70 >2o8v_A Phosphoadenosine phosp  38.3      25 0.00075   15.3   8.1   31   73-103    46-77  (252)
 71 >1tk9_A Phosphoheptose isomera  38.0      26 0.00076   15.3   7.7  108  155-262    14-143 (188)
 72 >2iv2_X Formate dehydrogenase   37.9      26 0.00076   15.3   5.9  162   64-267     7-183 (218)
 73 >3ixl_A Amdase, arylmalonate d  37.5      26 0.00077   15.2   6.7   64  197-260    21-93  (95)
 74 >1ovm_A Indole-3-pyruvate deca  36.0      28 0.00081   15.1   4.1   81   20-103    28-127 (169)
 75 >1wo8_A Methylglyoxal synthase  36.0      28 0.00082   15.1   6.9   72  184-261    29-108 (126)
 76 >1b93_A Protein (methylglyoxal  35.9      28 0.00082   15.1   7.0   71  184-260    28-106 (120)
 77 >2q28_A Oxalyl-COA decarboxyla  35.7      28 0.00082   15.0   6.2   82   20-103    19-110 (177)
 78 >1o4v_A Phosphoribosylaminoimi  35.3      28 0.00084   15.0   7.0  101   71-176    67-173 (183)
 79 >2uz1_A Benzaldehyde lyase; th  35.1      28 0.00084   15.0   4.3  135   20-165    22-174 (186)
 80 >2jfz_A Glutamate racemase; ce  34.7      29 0.00085   14.9   3.4   68  196-268    30-98  (139)
 81 >3dzc_A UDP-N-acetylglucosamin  34.5      15 0.00044   16.9   1.0   36  125-162   150-185 (185)
 82 >1m1n_B Nitrogenase molybdenum  33.3      30  0.0009   14.8   8.5  105  171-281    48-182 (215)
 83 >3lmz_A Putative sugar isomera  33.0      31 0.00091   14.8   7.0   53   22-80     16-80  (257)
 84 >2dwc_A PH0318, 433AA long hyp  31.6      32 0.00096   14.6   5.3   77  181-259    17-108 (108)
 85 >3kuu_A Phosphoribosylaminoimi  31.2      33 0.00097   14.6   6.5   39   63-103    52-96  (174)
 86 >3glr_A NAD-dependent deacetyl  31.1      33 0.00097   14.6   3.1   74   31-104     9-108 (142)
 87 >2rkb_A Serine dehydratase-lik  30.9      33 0.00098   14.5   3.7   56  193-256    15-72  (79)
 88 >2f9f_A First mannosyl transfe  30.4      34   0.001   14.5   2.5   18  127-144   143-160 (177)
 89 >2e7z_A Acetylene hydratase AH  30.4      34   0.001   14.5   4.2   54  190-243    70-123 (166)
 90 >3e7w_A D-alanine--poly(phosph  29.7      28 0.00084   15.0   1.8   81  161-247     3-85  (106)
 91 >1wpb_A Hypothetical protein Y  29.6      35   0.001   14.4   3.2   30  135-165    17-46  (60)
 92 >2d59_A Hypothetical protein P  29.3      35   0.001   14.3   5.1   70  192-261    35-129 (144)
 93 >3k5p_A D-3-phosphoglycerate d  29.0      36  0.0011   14.3   3.6   85   17-112     9-96  (144)
 94 >2x0d_A WSAF; GT4 family, tran  29.0      31 0.00093   14.7   1.9   71   66-145    76-146 (160)
 95 >1x7f_A Outer surface protein;  28.9      36  0.0011   14.3   4.0   69  185-253   165-264 (267)
 96 >3cf4_G Acetyl-COA decarbonyla  28.9      36  0.0011   14.3   4.2   26   63-88     98-123 (170)
 97 >3l6b_A Serine racemase; pyrid  28.7      36  0.0011   14.3   4.6   58  193-258    18-77  (82)
 98 >2fek_A Low molecular weight p  28.5      36  0.0011   14.3   4.9   66   24-89     25-112 (167)
 99 >1yz1_A Translationally contro  28.5      36  0.0011   14.3   4.5   39  130-168    91-129 (174)
100 >2q7x_A UPF0052 protein SP_156  28.2      33 0.00098   14.5   1.9   26   60-85     56-82  (210)
101 >2vbf_A Branched-chain alpha-k  27.7      38  0.0011   14.2   4.7   81   20-103    26-125 (163)
102 >1zbt_A RF-1, peptide chain re  27.5      38  0.0011   14.1   4.3   20  121-140    33-52  (116)
103 >3kws_A Putative sugar isomera  27.5      38  0.0011   14.1   8.0   48   23-78     25-81  (287)
104 >1dbg_A Chondroitinase B; beta  27.5      38  0.0011   14.1   2.5   47    1-47      1-49  (474)
105 >2jgq_A Triosephosphate isomer  27.1      38  0.0011   14.1   6.1   63  181-259   148-213 (233)
106 >1txj_A Translationally contro  26.5      39  0.0012   14.0   4.5   38  130-167    88-125 (171)
107 >3c48_A Predicted glycosyltran  26.4      40  0.0012   14.0   5.3   90   67-166    98-187 (188)
108 >3fj1_A Putative phosphosugar   26.0      40  0.0012   14.0   3.8   27  219-245   104-130 (193)
109 >1iow_A DD-ligase, DDLB, D-ALA  25.8      41  0.0012   13.9   2.4   37  210-246    11-47  (100)
110 >1cb8_A Protein (chondroitinas  25.6      41  0.0012   13.9   3.2   26  139-164    31-56  (59)
111 >2vsy_A XCC0866; transferase,   25.4      41  0.0012   13.9   5.4   95   64-165    82-176 (179)
112 >2c31_A Oxalyl-COA decarboxyla  25.2      41  0.0012   13.9   5.5   65   20-86     19-93  (179)
113 >2p0o_A Hypothetical protein D  25.2      42  0.0012   13.9   3.4   22   48-69     36-57  (225)
114 >1b9b_A TIM, protein (trioseph  25.1      42  0.0012   13.9   5.5   72  172-259   147-231 (255)
115 >1amu_A GRSA, gramicidin synth  25.0      42  0.0012   13.8   2.8   77  160-243     2-80  (107)
116 >1l5w_A Maltodextrin phosphory  24.9      42  0.0012   13.8   3.0   78   65-145   161-240 (322)
117 >1ko7_A HPR kinase/phosphatase  24.3      43  0.0013   13.8   3.8   45  217-261    64-109 (129)
118 >3ks9_A Mglur1, metabotropic g  24.0      44  0.0013   13.7   3.5   46  195-240    38-83  (190)
119 >2vbi_A Pyruvate decarboxylase  23.9      44  0.0013   13.7   6.0   82   20-103    25-124 (165)
120 >2po3_A 4-dehydrase; external   23.7      44  0.0013   13.7   6.7  128  130-260     5-142 (233)
121 >1p5j_A L-serine dehydratase;   23.5      45  0.0013   13.7   4.1   56  193-256    15-72  (80)
122 >2o2z_A Hypothetical protein;   23.3      43  0.0013   13.7   1.7   37   33-69     16-60  (323)
123 >2h31_A Multifunctional protei  22.7      46  0.0014   13.6   7.4   67  197-266    27-94  (134)
124 >3iv4_A Putative oxidoreductas  22.7      46  0.0014   13.6   4.4   46  214-259    35-80  (112)
125 >1vq8_P 50S ribosomal protein   22.6      21 0.00061   15.9  -0.0   20  125-144    21-40  (57)
126 >1z7w_A Cysteine synthase; tra  22.6      46  0.0014   13.5   3.3   66  183-256    24-98  (106)
127 >2gi4_A Possible phosphotyrosi  22.5      47  0.0014   13.5   4.6   78   54-139    63-140 (156)
128 >1nui_A DNA primase/helicase;   22.4      47  0.0014   13.5   4.4  104  183-294    12-118 (118)
129 >1t9b_A Acetolactate synthase,  22.3      47  0.0014   13.5   4.5   63   20-85     30-111 (197)
130 >2bpl_A Glucosamine--fructose-  22.3      47  0.0014   13.5   2.9   34  227-260    59-95  (159)
131 >3eua_A Putative fructose-amin  22.0      48  0.0014   13.5   2.4   27  219-245    87-113 (155)
132 >2pju_A Propionate catabolism   21.9      48  0.0014   13.4   4.2   67  183-260    16-86  (89)
133 >2q5c_A NTRC family transcript  21.5      49  0.0014   13.4   3.3   66  184-260    17-86  (90)
134 >2z4t_A Beta-galactoside alpha  21.4      33 0.00098   14.5   0.8   57    1-63      1-60  (111)
135 >2pgn_A Cyclohexane-1,2-dione   21.2      49  0.0015   13.4   5.6   81   20-103    22-119 (190)
136 >1usg_A Leucine-specific bindi  21.0      50  0.0015   13.3   6.5   78  178-260    13-100 (150)
137 >2zkr_p 60S ribosomal protein   20.9      19 0.00055   16.2  -0.6   20  125-144    21-40  (57)
138 >1v5e_A Pyruvate oxidase; oxid  20.7      51  0.0015   13.3   6.0   65   20-86     22-101 (222)
139 >2zj3_A Glucosamine--fructose-  20.7      51  0.0015   13.3   4.6   28  219-246   120-147 (216)
140 >2ki0_A DS119; beta-alpha-beta  20.7      32 0.00094   14.6   0.6   23  217-239    12-34  (36)
141 >2oho_A Glutamate racemase; is  20.3      52  0.0015   13.2   5.5   46  219-264    60-106 (142)
142 >2p0y_A Hypothetical protein L  20.3      52  0.0015   13.2   2.3   10   67-76    183-192 (341)
143 >1tzj_A ACC deaminase, 1-amino  20.1      52  0.0015   13.2   1.9   53  193-245    43-95  (124)

No 1  
>>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} (A:1-201,A:292-321)
Probab=100.00  E-value=1.3e-41  Score=300.77  Aligned_cols=176  Identities=40%  Similarity=0.653  Sum_probs=154.8

Q ss_pred             CCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf             35882899975289999998518914899962688980120227124577603789999887610689999974235575
Q gi|254780537|r   20 TTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTK   99 (294)
Q Consensus        20 ~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~   99 (294)
                      .+++++||||++|+++++++|+||+++|++|+|+|.|||+|||+|+|+++|++||+|||||.+||+|+.+++.+. ++..
T Consensus        42 ~~~~l~VvaT~~pl~~~vk~IaGd~v~V~~Li~~g~dPH~yeptp~d~~~i~~ADlii~~G~~~e~~l~~~~~~~-~~~~  120 (231)
T 1xvl_A           42 TEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNV-KDVP  120 (231)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTS-SSCC
T ss_pred             CCCCCEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHC-CCCC
T ss_conf             789858999775999999998088269998269897953576899999999669999995997308999987633-4554


Q ss_pred             CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             21112374202221001233463011122135678999999999864318889999998998630145533789988630
Q gi|254780537|r  100 IITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEK  179 (294)
Q Consensus       100 ~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~  179 (294)
                      ++.+++++......+ +++|++.|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|++|+.+++..+++
T Consensus       121 ~i~~~~~~~~~~~~~-~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~  199 (231)
T 1xvl_A          121 SVVLTEGIEPIPIAD-GPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQ  199 (231)
T ss_dssp             EEETTTTCCCCBCCS-SSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEECCCCCCCCCCC-CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             201113545554346-7653567611101658899999999999876380125799999999997788889999987642


Q ss_pred             CCCCCCEEEEECCCCHHHHH
Q ss_conf             78447369982665214577
Q gi|254780537|r  180 VDPEKRWFVTSEGCLVYLAE  199 (294)
Q Consensus       180 ~p~~~~~~v~~H~af~Y~~~  199 (294)
                      +|.+  .+-++-+-+.|=+|
T Consensus       200 i~~~--~~~~~~~~~~~~~~  217 (231)
T 1xvl_A          200 VPEG--PVPTFLDLLEYDAR  217 (231)
T ss_dssp             SCSS--SCCSHHHHHHHHHH
T ss_pred             CCCC--CCCCHHHHHHHHHH
T ss_conf             7798--86779999999999


No 2  
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:1-188,A:271-291)
Probab=100.00  E-value=2.7e-40  Score=291.86  Aligned_cols=160  Identities=23%  Similarity=0.373  Sum_probs=147.6

Q ss_pred             CCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             88289997528999999851891489996268898012022712457760378999988761068999997423557521
Q gi|254780537|r   22 QKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKII  101 (294)
Q Consensus        22 ~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i  101 (294)
                      ++++||||++|++++|++|+||+++|++|+|+|.|||+|+|+|+|+++|++||||||||.+||+|+.+.+.+.+++.++|
T Consensus         1 ek~~VvtS~~pl~~lv~~I~gd~v~V~~l~~~g~dpH~ye~tp~d~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~vi   80 (209)
T 1pq4_A            1 DAMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANANMKLI   80 (209)
T ss_dssp             CCEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCGGGCCCCHHHHHHGGGCSEEEECCTTTTTTTHHHHHHHCSSSEEE
T ss_pred             CCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCC
T ss_conf             99789997589999999983893479981698989756768999999996499999958726789999998735788741


Q ss_pred             CCCCCCCHHHHHH-----------------------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1123742022210-----------------------------01233463011122135678999999999864318889
Q gi|254780537|r  102 TVTDGINPIGVSE-----------------------------DTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNA  152 (294)
Q Consensus       102 ~~~~~i~~~~~~~-----------------------------~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~  152 (294)
                      ++++++..+...+                             ++++++..|||+||||.|++.++++|++.|+++||+++
T Consensus        81 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPHiWldp~na~~~a~~Ia~~L~~~dP~~~  160 (209)
T 1pq4_A           81 DSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAKGALMVADPHIWLSPTLVKRQATTIAKELAELDPDNR  160 (209)
T ss_dssp             ETTTTCCCCBSCC----------------------------------CCBCCCGGGCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             00157230002345665532356544444565445543322224666889982556888999999999999988680138


Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHCCC
Q ss_conf             99999899863014553378998863078
Q gi|254780537|r  153 KKYELNAREYSEKIRNSILPLKTRIEKVD  181 (294)
Q Consensus       153 ~~y~~N~~~~~~~l~~l~~~~~~~~~~~p  181 (294)
                      ++|++|+++|.++|.+|+.+++++++++.
T Consensus       161 ~~y~~N~~~~~~~L~~Ld~~~~~~l~~i~  189 (209)
T 1pq4_A          161 DQYEANLAAFLAELERLNQELGQILQPLA  189 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999999999864310


No 3  
>>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} (A:1-195)
Probab=100.00  E-value=2.9e-40  Score=291.71  Aligned_cols=161  Identities=24%  Similarity=0.403  Sum_probs=145.2

Q ss_pred             CCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf             35882899975289999998518914899962688980120227124577603789999887610689999974235575
Q gi|254780537|r   20 TTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTK   99 (294)
Q Consensus        20 ~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~   99 (294)
                      .+++++||||++|++++|++|+||+++|++|+|+|.|||+|||+|+|++++++||++||||.++|+|+.++..+......
T Consensus        35 ~~~~~~Vvts~~p~~~~v~~I~gd~~~V~~l~~~~~dpH~y~p~p~d~~~l~~aDl~v~~G~~~e~~~~~~~~~~~~~~~  114 (195)
T 1toa_A           35 ADGKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRL  114 (195)
T ss_dssp             --CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHHCSEEEECCTTCSTTCHHHHHHHTTSSE
T ss_pred             CCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf             06996799988699999999808825899805979796568689999999955999999289877477999986457776


Q ss_pred             CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             21112374202221001233463011122135678999999999864318889999998998630145533789988630
Q gi|254780537|r  100 IITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEK  179 (294)
Q Consensus       100 ~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~  179 (294)
                      ++.....  .....+++++++..|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|++|+++++.++++
T Consensus       115 ~~~~~~~--~~~~~~~~~~~~~~dpH~W~~p~~~~~~a~~i~~~L~~ldP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~~  192 (195)
T 1toa_A          115 VVAVSET--IPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQS  192 (195)
T ss_dssp             EEEGGGG--SCGGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCC--CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5201444--23211235442223420230733689999999999998767667788778999999999987899999875


Q ss_pred             CCC
Q ss_conf             784
Q gi|254780537|r  180 VDP  182 (294)
Q Consensus       180 ~p~  182 (294)
                      +|.
T Consensus       193 iPa  195 (195)
T 1toa_A          193 LPA  195 (195)
T ss_dssp             SCG
T ss_pred             HHC
T ss_conf             303


No 4  
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:1-189,A:284-312)
Probab=100.00  E-value=2e-39  Score=286.05  Aligned_cols=166  Identities=26%  Similarity=0.356  Sum_probs=149.7

Q ss_pred             CCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf             46433588289997528999999851891489996268898012022712457760378999988761068999997423
Q gi|254780537|r   16 SASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLK   95 (294)
Q Consensus        16 ~~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~   95 (294)
                      ++...+++++||||++|++++|++|+||+++|++|+|+|+|||+|+|+|+|+++|++||+||+||.++|+|+.+++.+..
T Consensus        14 ~~~~~~~~l~VvaT~~pl~divk~I~gd~~~V~~li~~g~dPH~yeptpsd~~~l~~ADlii~~G~~~E~~~~~~~~~~~   93 (218)
T 2o1e_A           14 SADSKGDKLHVVTTFYPXYEFTKQIVKDKGDVDLLIPSSVEPHDWEPTPKDIANIQDADLFVYNSEYXETWVPSAEKSXG   93 (218)
T ss_dssp             -------CEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCTTTCCCCHHHHHHHHHSSEEEESCTTTSTTHHHHHHTTC
T ss_pred             CCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCC
T ss_conf             75456898589998789999999980894389980598989845658999999996699999878532778999998645


Q ss_pred             C-CCCCCCCCCCCCHHHHHH---------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             5-575211123742022210---------012334630111221356789999999998643188899999989986301
Q gi|254780537|r   96 K-GTKIITVTDGINPIGVSE---------DTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEK  165 (294)
Q Consensus        96 ~-~~~~i~~~~~i~~~~~~~---------~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~  165 (294)
                      . +..+++++++++.....+         +.+++++.|||+|+||.|++.++++|++.|++++|+++++|++|+++|.++
T Consensus        94 ~~~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~dPHiWldp~n~~~~a~~I~~~L~~l~P~~~~~y~~N~~~~~~~  173 (218)
T 2o1e_A           94 QGHAVFVNASKGIDLXEGSEEEHEEHDHGEHEHSHAXDPHVWLSPVLAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAK  173 (218)
T ss_dssp             SSSCEEEETTTTCCCCCC----------------CCCCCGGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             67841343135720100122222345543344444567301039999999999999999776651205899999999987


Q ss_pred             HHHHHHHHHHHHHCCC
Q ss_conf             4553378998863078
Q gi|254780537|r  166 IRNSILPLKTRIEKVD  181 (294)
Q Consensus       166 l~~l~~~~~~~~~~~p  181 (294)
                      |++++++++..++++.
T Consensus       174 l~~l~~~~~~~l~~ik  189 (218)
T 2o1e_A          174 LQDLDKLYRTTAKKAE  189 (218)
T ss_dssp             HHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHHCCC
T ss_conf             5557899987433025


No 5  
>>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A (A:1-179)
Probab=100.00  E-value=3.2e-39  Score=284.61  Aligned_cols=173  Identities=32%  Similarity=0.482  Sum_probs=151.7

Q ss_pred             HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHH
Q ss_conf             99999860464335882899975289999998518914899962688980120227124577603789999887610689
Q gi|254780537|r    8 LLFSYIPMSASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETY   87 (294)
Q Consensus         8 l~~~~~~~~~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~   87 (294)
                      |.+|....+..+.+++++||||++|++++|++|+||+++|++|+|+|.|||+|+|+|+|+++|++||++|+||.+||+|+
T Consensus         2 l~~~~~~~~~~~~~~~~~Vvtt~~pl~~lvk~I~gd~~~V~~l~~~~~dpH~~e~~~~d~~~l~~ADl~~~~G~~~e~~~   81 (179)
T 3hh8_A            2 IPRNSSTGAKTAKSDKLKVVATNSIIADMTKAIAGDKIDLHSIVPIGQDPHEYEPLPEDAEKTSNADVIFYNGINLEDGG   81 (179)
T ss_dssp             -------------CCSEEEEESSHHHHHHHHHHHGGGEEEEECSCTTSCSSSCCCCHHHHHHHHHCSEEEECCTTSSCST
T ss_pred             CCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHH
T ss_conf             99888999875668984799977099999999809845999816999896666689999999708999998388620668


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCHHHH-----HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999742355752111237420222-----10012334630111221356789999999998643188899999989986
Q gi|254780537|r   88 MKYFTNLKKGTKIITVTDGINPIGV-----SEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREY  162 (294)
Q Consensus        88 ~~~~~~~~~~~~~i~~~~~i~~~~~-----~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~  162 (294)
                      .+++.+..++...+...++......     ..+.+++++.|||+|+||.|++.++++|++.|+++||+++++|++|+++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~~~~~~a~~i~~~L~~~dP~~~~~y~~N~~~~  161 (179)
T 3hh8_A           82 QAWFTKLVKNAQKTKNKDYFAVSDGIDVIYLEGASEKGKEDPHAWLNLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAY  161 (179)
T ss_dssp             TSHHHHHHHHTTCCBTTTEEETTTTSCCCBSTTCCSTTCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf             99999987531023687669842464334456655457877531589889999999999999876934279999879999


Q ss_pred             HCCHHHHHHHHHHHHHCC
Q ss_conf             301455337899886307
Q gi|254780537|r  163 SEKIRNSILPLKTRIEKV  180 (294)
Q Consensus       163 ~~~l~~l~~~~~~~~~~~  180 (294)
                      .++|++|+.++++.++++
T Consensus       162 ~~~l~~l~~~~~~~~~~i  179 (179)
T 3hh8_A          162 VAKLEKLDKEAKSKFDAI  179 (179)
T ss_dssp             HHHHHHHHHHHHHTTTTS
T ss_pred             HHHHHHHHHHHHHHHHHC
T ss_conf             998888899999986422


No 6  
>>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} (A:1-176,A:262-284)
Probab=100.00  E-value=2.4e-38  Score=278.72  Aligned_cols=170  Identities=21%  Similarity=0.322  Sum_probs=150.7

Q ss_pred             CCCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf             04643358828999752899999985189148999626889801202271245776037899998876106899999742
Q gi|254780537|r   15 MSASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNL   94 (294)
Q Consensus        15 ~~~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~   94 (294)
                      ++.+..+++++||||++|+++++++|+||+++|++|+| |+|||+|+|+|+|+++|++||+||++|.+||+|+.+++.+.
T Consensus         2 ~~~~~~~~~~~VVtS~~pl~~ivk~I~gd~v~V~~l~p-g~dPH~yeptp~di~~i~~ADliv~~G~~~E~~~~~~~~~~   80 (199)
T 3cx3_A            2 QKESQTGKGXKIVTSFYPIYAXVKEVSGDLNDVRXIQS-SSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNL   80 (199)
T ss_dssp             -----CCSCCEEEESSHHHHHHHHHHHTTSSEEEECCC-CSCTTTCCCCHHHHHHHHHSSEEEESCTTTSCTTTTCCTTT
T ss_pred             CCCCCCCCCCEEEEECHHHHHHHHHHCCCCCEEEECCC-CCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf             87777899968999878999999997499614997289-98986244799999998559999990886368899999976


Q ss_pred             C-CCCCCCCCCCCCCHHH--------HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             3-5575211123742022--------210012334630111221356789999999998643188899999989986301
Q gi|254780537|r   95 K-KGTKIITVTDGINPIG--------VSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEK  165 (294)
Q Consensus        95 ~-~~~~~i~~~~~i~~~~--------~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~  165 (294)
                      . ++..++.++.++....        ..+++++++..|||+||||.|+++|+++|++.|+++||+++++|++|+++|.++
T Consensus        81 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPHiWldp~n~~~~a~~I~~~L~~~~P~~k~~y~~N~~~~~~~  160 (199)
T 3cx3_A           81 KKSKVKVLEASEGXTLERVPGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKK  160 (199)
T ss_dssp             TTCCCEEEETTTTCCCCBCCC-------------CCBCCCGGGSHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHH
T ss_pred             HCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             40255302210100001367633444555422135775014036401788999899898765033278899999999877


Q ss_pred             HHHHHHHHHHHHHCCCCCCC
Q ss_conf             45533789988630784473
Q gi|254780537|r  166 IRNSILPLKTRIEKVDPEKR  185 (294)
Q Consensus       166 l~~l~~~~~~~~~~~p~~~~  185 (294)
                      |.+|+.++++.++++|..+.
T Consensus       161 L~~L~~~~~~~l~~~p~~~~  180 (199)
T 3cx3_A          161 AQELTKKFQPKFEKATPQND  180 (199)
T ss_dssp             HHHHHHHHHHHHHSCSCCSS
T ss_pred             HHHHHHHHHHHHHHCCCCCC
T ss_conf             65555889876531258886


No 7  
>>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A (A:1-172)
Probab=100.00  E-value=1e-37  Score=274.51  Aligned_cols=156  Identities=21%  Similarity=0.362  Sum_probs=142.4

Q ss_pred             EEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC-CCCCCCCC
Q ss_conf             89997528999999851891489996268898012022712457760378999988761068999997423-55752111
Q gi|254780537|r   25 VVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLK-KGTKIITV  103 (294)
Q Consensus        25 ~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~-~~~~~i~~  103 (294)
                      +||||++|++++|++|+||+++|++|+|+|+|||+|+|+|+|+++|++||+||++|.+||+|+.+++.+.. ++..++++
T Consensus         1 tVv~s~~pl~~lv~~I~gd~~~v~~l~~~~~dpH~y~~~~~d~~~l~~Adl~i~~G~~~E~~~~~~~~~~~~~~~~~i~~   80 (172)
T 2prs_A            1 AVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQ   80 (172)
T ss_dssp             CEEESSHHHHHHHHHHHTTTSCEEESSCTTCBTTBCCCCTTHHHHHHHCSEEEECCTTTCGGGHHHHHTSCGGGEEEGGG
T ss_pred             CEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHH
T ss_conf             98996479999999985996479980598989667868999999996699999918541788999998563678511113


Q ss_pred             CCCCCHHHHH---------------HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             2374202221---------------0012334630111221356789999999998643188899999989986301455
Q gi|254780537|r  104 TDGINPIGVS---------------EDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRN  168 (294)
Q Consensus       104 ~~~i~~~~~~---------------~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~  168 (294)
                      ++++++....               .+++++++.|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~  160 (172)
T 2prs_A           81 LEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLAS  160 (172)
T ss_dssp             CTTTGGGCCC---------------------CCCCCCGGGCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf             13655542123466554432223443222357776136646377899999999999864836566788899999988878


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             337899886307
Q gi|254780537|r  169 SILPLKTRIEKV  180 (294)
Q Consensus       169 l~~~~~~~~~~~  180 (294)
                      |+.++++.++++
T Consensus       161 ld~~~~~~~~~i  172 (172)
T 2prs_A          161 TETQVGNELAPL  172 (172)
T ss_dssp             HHHHHHHHHGGG
T ss_pred             HHHHHHHHHCHH
T ss_conf             889999872424


No 8  
>>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A (A:1-177)
Probab=100.00  E-value=5.5e-37  Score=269.54  Aligned_cols=167  Identities=24%  Similarity=0.326  Sum_probs=142.6

Q ss_pred             HHCCCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHH
Q ss_conf             86046433588289997528999999851891489996268898012022712457760378999988761068999997
Q gi|254780537|r   13 IPMSASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFT   92 (294)
Q Consensus        13 ~~~~~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~   92 (294)
                      |..+....+++++||||++|++++|++|+||.++|+ ++|+|.|||+|+|+|+|+++|++||+|||||.+||+|+.+++.
T Consensus         2 c~~~~~~~~~~~~Vv~s~~pl~~~v~~I~gd~~~~~-li~~g~dpH~~e~~p~d~~~i~~ADlvv~~G~~~e~~~~~~~~   80 (177)
T 3gi1_A            2 SGANPKQPTQGMSVVTSFYPMYAMTKEVSGDLNDVR-MIQSGAGIHSFEPSVNDVAAIYDADLFVYHSHTLEAWARDLDP   80 (177)
T ss_dssp             --------CCSCEEEESSHHHHHHHHHHHTTSSEEE-EC-----CCSCCCCHHHHHHHHTSSEEEESCTTTSGGGTTCCT
T ss_pred             CCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHH
T ss_conf             999987788984899987899999999818950699-7289989776768999999985599999949974078999998


Q ss_pred             HCCCCCCCC-CCCCCCCH--------HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             423557521-11237420--------222100123346301112213567899999999986431888999999899863
Q gi|254780537|r   93 NLKKGTKII-TVTDGINP--------IGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYS  163 (294)
Q Consensus        93 ~~~~~~~~i-~~~~~i~~--------~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~  163 (294)
                      +...+...+ ........        ....++.+++++.|||+|+||.|++.++++|++.|+++||+++++|++|+++|.
T Consensus        81 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~W~~p~~~~~~a~~i~~~L~~~dP~~~~~y~~n~~~~~  160 (177)
T 3gi1_A           81 NLKKSKVDVFEASKPLTLDRVKGLEDMEVTQGIDPATLYDPHTWTDPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFK  160 (177)
T ss_dssp             TTTTCCCEEEETTTTSCCCBCC---------------CBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred             HCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf             53456731331345544332256664334434455789998804789999999999999997427677899999999999


Q ss_pred             CCHHHHHHHHHHHHHCC
Q ss_conf             01455337899886307
Q gi|254780537|r  164 EKIRNSILPLKTRIEKV  180 (294)
Q Consensus       164 ~~l~~l~~~~~~~~~~~  180 (294)
                      ++|++|++++++.++++
T Consensus       161 ~~l~~l~~~~~~~~~~i  177 (177)
T 3gi1_A          161 KEAEQLTEEYTQKFKKV  177 (177)
T ss_dssp             HHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999998653


No 9  
>>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A (A:180-294)
Probab=99.91  E-value=1.4e-23  Score=179.15  Aligned_cols=112  Identities=29%  Similarity=0.613  Sum_probs=107.9

Q ss_pred             CCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE
Q ss_conf             44736998266521457752972887226886400078999999976201697189982789979999999982993444
Q gi|254780537|r  182 PEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGG  261 (294)
Q Consensus       182 ~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~  261 (294)
                      .+++.|+++|++|+||+++|||++.++.+++++.+|||++|.++++.||+++|+|||+|++++++.++.|++++|++++.
T Consensus         2 ~~~~~~~~~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~i~~l~~~ik~~~i~~if~e~~~~~~~~~~ia~~~~~~~~~   81 (115)
T 3hh8_A            2 ENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIYS   81 (115)
T ss_dssp             GGGCCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCSHHHHHHHHHHCCCEEE
T ss_pred             CCCEEEEEECHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEC
T ss_conf             45547886161789999986983103556577655577999999999760587589973889939999999980997641


Q ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             32012378777886899999999999998620
Q gi|254780537|r  262 VLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       262 ~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                      +.+++++++.+.++.+|++||++|+++|.+||
T Consensus        82 l~pl~~~~e~~~~~~~Y~~~m~~n~~~l~~al  113 (115)
T 3hh8_A           82 EIFTDSIAKKGKPGDSYYAMMKWNLDKISEGL  113 (115)
T ss_dssp             EECSSSCCCTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             14655677889874779999999999999986


No 10 
>>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} (A:196-313)
Probab=99.89  E-value=1.2e-22  Score=172.86  Aligned_cols=111  Identities=23%  Similarity=0.313  Sum_probs=102.1

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             47369982665214577529728872268864000789999999762016971899827899799999999829934443
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                      ++|.++++|++|+||+++|||++.++.+++++.+||+++|+++++.||+++|+|||+|++++++.++.|++++++++..+
T Consensus         1 k~r~~v~~H~af~Y~~~~ygl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~~~~~~~l   80 (118)
T 1toa_A            1 ERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVV   80 (118)
T ss_dssp             GGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHHHHHHTTTCCC
T ss_pred             CCEEEEECCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf             55145411541034666338540101234443012147999999999864996899848999089999999857884132


Q ss_pred             EEC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             201-----2378777886899999999999998620
Q gi|254780537|r  263 LYV-----DSLSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       263 ~~~-----d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                      .++     |.+++.+.++++|++||+.|+++|.+||
T Consensus        81 ~p~~~l~~d~l~~~~~~~~~Y~~~m~~n~~~l~~aL  116 (118)
T 1toa_A           81 QIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAAL  116 (118)
T ss_dssp             EEEEEECSSSCCCTTSGGGSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             557723544456778886779999999999999986


No 11 
>>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A (A:178-286)
Probab=99.89  E-value=2.5e-22  Score=170.60  Aligned_cols=108  Identities=28%  Similarity=0.406  Sum_probs=102.6

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             47369982665214577529728872268864000789999999762016971899827899799999999829934443
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                      ++|.|+++|++|+||+++|||++.++.+.+++.+|||++++++++.||+++|+|||+|++.+++.++.|++++++++.. 
T Consensus         1 k~~~~~~~H~af~Yl~~~ygl~~~~~~~~~~~~~ps~~~i~~l~~~ik~~~i~~i~~e~~~~~~~~~~ia~~~~~~~~~-   79 (109)
T 3gi1_A            1 RSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKT-   79 (109)
T ss_dssp             SCCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEE-
T ss_pred             CCCCEEEECCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEE-
T ss_conf             2774685160567899976982763256687678998999999999997599889995889939999999982998787-


Q ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             2012378777886899999999999998620
Q gi|254780537|r  263 LYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       263 ~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                        +|+++.....+.+|++||+.|+++|.+||
T Consensus        80 --l~~l~~~~~~~~~Y~~~m~~n~~~l~~aL  108 (109)
T 3gi1_A           80 --LSPLEAAPSGNKTYLENLRANLEVLYQQL  108 (109)
T ss_dssp             --CCCSCSCCSSSCCHHHHHHHHHHHHHHHH
T ss_pred             --ECCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             --47776788886659999999999999971


No 12 
>>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A (A:173-284)
Probab=99.86  E-value=1.9e-21  Score=164.65  Aligned_cols=108  Identities=17%  Similarity=0.257  Sum_probs=99.9

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             47369982665214577529728872268864000789999999762016971899827899799999999829934443
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                      ++|.++++|++|+||+++|||++.++.+.++|.+|||++|.++++.||+++|+|||+|++.+++.++.|++++|++++. 
T Consensus         1 k~~~~v~~H~a~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~i~~i~~e~~~~~~~~~~la~~~~~~~~~-   79 (112)
T 2prs_A            1 KGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGT-   79 (112)
T ss_dssp             TTCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEE-
T ss_pred             HCCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEE-
T ss_conf             3374010162489999973992556761145557788899999998773498389996888929999999980997798-


Q ss_pred             EECCCCCCCC-CCCCCHHHHHHHHHHHHHHHC
Q ss_conf             2012378777-886899999999999998620
Q gi|254780537|r  263 LYVDSLSKPD-GPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       263 ~~~d~l~~~~-~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                        +|+++... ..+++|++||++|+++|++||
T Consensus        80 --ld~l~~~~~~~~~~Y~~~m~~n~~~l~~~l  109 (112)
T 2prs_A           80 --LDPLGTNIKLGKTSYSEFLSQLANQYASCL  109 (112)
T ss_dssp             --CCTTCTTSCCSTTHHHHHHHHHHHHHHHHH
T ss_pred             --ECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             --447756777770429999999999999986


No 13 
>>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} (A:202-291)
Probab=99.77  E-value=1.6e-18  Score=144.90  Aligned_cols=88  Identities=43%  Similarity=0.826  Sum_probs=84.7

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             47369982665214577529728872268864000789999999762016971899827899799999999829934443
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                      ++|.++++|++|+||+++|||+++++.+++++.+|||++|+++++.||+++++|||+|++.+++.++.|++++|+++..+
T Consensus         2 k~k~~v~~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~i~~l~~~ik~~~i~~if~e~~~~~k~~~~ia~~~g~~v~~l   81 (90)
T 1xvl_A            2 NQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFGGN   81 (90)
T ss_dssp             GGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCC
T ss_conf             55089994441146898679836640266887789988999999987634885899738899199999999859971363


Q ss_pred             EECCCCCC
Q ss_conf             20123787
Q gi|254780537|r  263 LYVDSLSK  270 (294)
Q Consensus       263 ~~~d~l~~  270 (294)
                      ++++++++
T Consensus        82 ~~~~~~~~   89 (90)
T 1xvl_A           82 LYVDSLST   89 (90)
T ss_dssp             ECSSCCCC
T ss_pred             CCCCCCCC
T ss_conf             21036888


No 14 
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:190-271)
Probab=99.72  E-value=2.8e-17  Score=136.49  Aligned_cols=82  Identities=26%  Similarity=0.400  Sum_probs=77.3

Q ss_pred             CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf             73699826652145775297288722688640007899999997620169718998278997999999998299344432
Q gi|254780537|r  184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVL  263 (294)
Q Consensus       184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~  263 (294)
                      +|.++++|+||+||+++|||++.++.++++|.+|||++|+++++.||+++|+|||+|++.+++.++.|++++|+++..  
T Consensus         1 ~r~~v~~H~af~Yf~~~ygl~~~~~~~~~~~~~ps~~~i~~l~~~ik~~~i~~if~e~~~~~k~~~~ia~~~g~~v~~--   78 (82)
T 2o1e_A            1 KKEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEV--   78 (82)
T ss_dssp             CCEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEEC--
T ss_pred             CCEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEE--
T ss_conf             641588521366688746844764023565222133579999987652588689994888949999999971997655--


Q ss_pred             ECCCC
Q ss_conf             01237
Q gi|254780537|r  264 YVDSL  268 (294)
Q Consensus       264 ~~d~l  268 (294)
                       +|+|
T Consensus        79 -ldpl   82 (82)
T 2o1e_A           79 -LNTL   82 (82)
T ss_dssp             -CCCT
T ss_pred             -ECCC
T ss_conf             -4565


No 15 
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:189-270)
Probab=99.70  E-value=7.5e-17  Score=133.66  Aligned_cols=81  Identities=20%  Similarity=0.356  Sum_probs=75.3

Q ss_pred             CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf             73699826652145775297288722688640007899999997620169718998278997999999998299344432
Q gi|254780537|r  184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVL  263 (294)
Q Consensus       184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~  263 (294)
                      +|.++++|+||+||+++|||++.++..  ++.+|||++|+++++.||+++|++||+|++.+++.++.|++++|+++..  
T Consensus         2 ~r~~v~~H~af~Y~a~~ygl~~~~~i~--~~~eps~~~i~~l~~~ik~~~i~~if~e~~~~~k~~~~ia~etg~~~~~--   77 (82)
T 1pq4_A            2 QRKFIVFHPSWAYFARDYNLVQIPIEV--EGQEPSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVEL--   77 (82)
T ss_dssp             CCEEEESSCCCHHHHHHTTCEEEESCB--TTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEE--
T ss_pred             CCCEEECCCHHHHHHHHCCCCEEECCC--CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEE--
T ss_conf             773120274089999967993520446--7889998999999999997499889972899919999999980998798--


Q ss_pred             ECCCCC
Q ss_conf             012378
Q gi|254780537|r  264 YVDSLS  269 (294)
Q Consensus       264 ~~d~l~  269 (294)
                       +|+|+
T Consensus        78 -ld~l~   82 (82)
T 1pq4_A           78 -LDPLA   82 (82)
T ss_dssp             -ECTTC
T ss_pred             -ECCCC
T ss_conf             -78872


No 16 
>>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} (A:177-261)
Probab=99.70  E-value=2.9e-17  Score=136.42  Aligned_cols=84  Identities=27%  Similarity=0.427  Sum_probs=78.7

Q ss_pred             CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf             73699826652145775297288722688640007899999997620169718998278997999999998299344432
Q gi|254780537|r  184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVL  263 (294)
Q Consensus       184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~  263 (294)
                      +|.++++|+||+||+++|||++.++.+++++.+|||++|+++++.+|+++|+|||.|++.+++.++.|++++|+++..  
T Consensus         1 ~r~~v~~H~af~Y~~~~ygl~~~~~~~~~~~~~ps~~~i~~~~~~ik~~~i~~If~e~~~~~k~~~~ia~e~g~~~~~--   78 (85)
T 3cx3_A            1 QKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKT--   78 (85)
T ss_dssp             CCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEE--
T ss_pred             CCEEEEECCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE--
T ss_conf             531899667520268865966875046676445225689999987524675599984889919999999980998688--


Q ss_pred             ECCCCCC
Q ss_conf             0123787
Q gi|254780537|r  264 YVDSLSK  270 (294)
Q Consensus       264 ~~d~l~~  270 (294)
                       +|+|..
T Consensus        79 -ldpl~~   84 (85)
T 3cx3_A           79 -LNPLES   84 (85)
T ss_dssp             -CCCSSS
T ss_pred             -ECCCCC
T ss_conf             -577767


No 17 
>>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A* (A:198-366)
Probab=84.02  E-value=2.4  Score=22.26  Aligned_cols=99  Identities=13%  Similarity=0.057  Sum_probs=63.0

Q ss_pred             CCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             12022712457760378999988761068999997423557521112374202221001233463011122135678999
Q gi|254780537|r   58 HSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYI  137 (294)
Q Consensus        58 H~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a  137 (294)
                      |.|.+.......+..+|+++......|++-...++....+..+|....+.......+       ..-.+..++.+...++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~lEama~G~pvi~~~~~~~~~~~~~-------~~~g~~~~~~d~~~~~  143 (169)
T 2gek_A           71 LGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD-------GDAGRLVPVDDADGMA  143 (169)
T ss_dssp             CCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT-------TTSSEECCTTCHHHHH
T ss_pred             EEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHCC-------CCEEEEECCCCHHHHH
T ss_conf             740233101110123322222223435675400221136841998289976887307-------9639997799999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999998643188899999989986301
Q gi|254780537|r  138 ENIRKALTALDPSNAKKYELNAREYSEK  165 (294)
Q Consensus       138 ~~I~~~L~~~dP~~~~~y~~N~~~~~~~  165 (294)
                      +.|...+  .+|+......+|+.++.++
T Consensus       144 ~~i~~l~--~~~~~~~~~~~~a~~~~~k  169 (169)
T 2gek_A          144 AALIGIL--EDDQLRAGYVARASERVHR  169 (169)
T ss_dssp             HHHHHHH--HCHHHHHHHHHHHHHHGGG
T ss_pred             HHHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_conf             9999997--6999999999999999996


No 18 
>>1yya_A Triosephosphate isomerase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus HB8} (A:)
Probab=83.16  E-value=3.4  Score=21.23  Aligned_cols=75  Identities=12%  Similarity=0.226  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHCCCCC--CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCE
Q ss_conf             337899886307844--7369982665214577529728872268864000789999999762016-----------971
Q gi|254780537|r  169 SILPLKTRIEKVDPE--KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIK  235 (294)
Q Consensus       169 l~~~~~~~~~~~p~~--~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~  235 (294)
                      +...++..+..++..  ++.+++|.|.|               .+..+.-+|+.++.++...||+.           +++
T Consensus       142 ~~~Ql~~~l~~i~~~~~~~~iIAYEPvw---------------AIGtg~~as~~~i~~~~~~Ir~~l~~~~~~~~a~~i~  206 (250)
T 1yya_A          142 TLRQLRGSLEGVEPPGPEALVIAYEPVW---------------AIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVR  206 (250)
T ss_dssp             HHHHHHHHTTTCCCSSGGGCEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCE
T ss_pred             HHHHHHCCCCCHHHHHCCCEEEEECCEE---------------ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             6777630132110221145288734333---------------0157877770667777889999999761264537774


Q ss_pred             EEEEECCCCHHHHHHHHHHHCCCE
Q ss_conf             899827899799999999829934
Q gi|254780537|r  236 FIFSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       236 ~if~e~~~~~~~~~~ia~e~~~~~  259 (294)
                      .+ +-...++.-+..++...++.-
T Consensus       207 Il-YGGSV~~~n~~~l~~~~~iDG  229 (250)
T 1yya_A          207 IL-YGGSVNPKNFADLLSMPNVDG  229 (250)
T ss_dssp             EE-EESSCCTTTHHHHHTSTTCCE
T ss_pred             EE-ECCCCCHHHHHHHHCCCCCCE
T ss_conf             89-727889879999847789886


No 19 
>>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washington, NIH, niaid, structural genomics; 1.55A {Cryptosporidium parvum iowa II} (A:)
Probab=77.55  E-value=5.1  Score=20.01  Aligned_cols=93  Identities=13%  Similarity=0.152  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEE
Q ss_conf             337899886307844736998266521457752972887226886400078999999976201-----------697189
Q gi|254780537|r  169 SILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFI  237 (294)
Q Consensus       169 l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~i  237 (294)
                      +...++..+..++..++.+|+|.|.|               .+..+..+|+.++.++.++|++           .++++|
T Consensus       166 v~~Ql~~~~~~~~~~~~ivIAYEPvW---------------AIGtg~~as~~~i~~v~~~Ir~~l~~~~~~~~~~~v~il  230 (271)
T 3krs_A          166 IQKQLTEALKDVSDLSNLVIAYEPIW---------------AIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRII  230 (271)
T ss_dssp             HHHHHHHHTTTCCCCTTEEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEE
T ss_pred             HHHHHHHHHCCCCCCCEEEEEECCHH---------------HCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEE
T ss_conf             77767653035356650899965244---------------216786676310024688999999876073132676388


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             98278997999999998299344432012378777886899999999
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF  284 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~  284 (294)
                       +....++.-+..++.+.++.-+ ++-.-+|      ..+|.++++.
T Consensus       231 -YGGSV~~~N~~~l~~~~~iDG~-LVG~asl------~~~f~~Ii~~  269 (271)
T 3krs_A          231 -YGGSVTPDNCNELIKCADIDGF-LVGGASL------KPTFAKIIES  269 (271)
T ss_dssp             -ECSCCCTTTHHHHHHSTTCCEE-EESGGGG------STTHHHHHHH
T ss_pred             -ECCCCCHHHHHHHHCCCCCCEE-EEECHHC------CHHHHHHHHH
T ss_conf             -6589898799999657898978-9510547------9899999995


No 20 
>>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} (A:)
Probab=77.21  E-value=5.2  Score=19.95  Aligned_cols=192  Identities=15%  Similarity=0.184  Sum_probs=100.9

Q ss_pred             EEEECHHHHHHHHHHCCCEEEEEE--EECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             999752899999985189148999--626889801202271245776037899998876106899999742355752111
Q gi|254780537|r   26 VLSSFSIIGDITQNIAKDLVTVTT--LVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        26 Vv~s~~pl~~iv~~I~gd~v~V~~--li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      +++--+++-..+++..+..+.+.+  +-+.+..+++=|.+|..++.+.=.-+++  | .-|....               
T Consensus        40 viaP~~~~l~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mL~d~G~~~vii--G-HSERR~~---------------  101 (248)
T 1o5x_A           40 VVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVII--G-HFERRKY---------------  101 (248)
T ss_dssp             EEECCGGGHHHHHHHSCTTSEEEESCCCSSCSBSCTTCCCHHHHHHTTCCEEEE--C-CHHHHHH---------------
T ss_pred             EEECCHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHCCCCEEEE--C-CHHHHHH---------------
T ss_conf             998983899999998547751540101311477763515699999759989997--5-4676643---------------


Q ss_pred             CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
Q ss_conf             237420222100123346301112213567899999999986431--888999999899863014553378998863078
Q gi|254780537|r  104 TDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALD--PSNAKKYELNAREYSEKIRNSILPLKTRIEKVD  181 (294)
Q Consensus       104 ~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~d--P~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p  181 (294)
                                     .++      .|-...+++...+...|.-..  -+..+.     ++.....+-+...++..+....
T Consensus       102 ---------------f~E------td~~i~~Kv~~al~~gl~~IvCvGE~~~~-----r~~~~~~~~~~~q~~~~l~~~~  155 (248)
T 1o5x_A          102 ---------------FHE------TDEDVREKLQASLKNNLKAVVCFGESLEQ-----REQNKTIEVITKQVKAFVDLID  155 (248)
T ss_dssp             ---------------SCC------CHHHHHHHHHHHHHTTCEEEEEECCCHHH-----HHTTCHHHHHHHHHHTTGGGCC
T ss_pred             ---------------CCC------CHHHHHHHHHHHHHCCCEEEEEECCCCCC-----CCCCCHHHHHHHHHHHHHHCCC
T ss_conf             ---------------499------70899999999998799799995675212-----2246543799999998860335


Q ss_pred             CCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEEEECCCCHHHHHH
Q ss_conf             447369982665214577529728872268864000789999999762016-----------971899827899799999
Q gi|254780537|r  182 PEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIFSESTNSDQPAKQ  250 (294)
Q Consensus       182 ~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~  250 (294)
                      ..++.+++|.|.|               .+..+..+|+.++.++.++||+.           +++.+ +....++.-+..
T Consensus       156 ~~~~~vIAYEPvw---------------AIGtg~~as~~~i~~v~~~Ir~~l~~~~~~~~~~~i~il-YGGsV~~~N~~~  219 (248)
T 1o5x_A          156 NFDNVILVYEPLW---------------AIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRIL-YGGSVNTENCSS  219 (248)
T ss_dssp             CTTSEEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEE-ECSCCCTTTHHH
T ss_pred             CCCEEEEEECCEE---------------EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCHHHHHH
T ss_conf             6011899967676---------------426899899899999999999999986135443775099-648989889999


Q ss_pred             HHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             9998299344432012378777886899999999
Q gi|254780537|r  251 VAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF  284 (294)
Q Consensus       251 ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~  284 (294)
                      +....++.-. +.-.-+|      ..+|.++++.
T Consensus       220 l~~~~~iDG~-LvG~asl------~~~f~~ii~~  246 (248)
T 1o5x_A          220 LIQQEDIDGF-LVGNASL------KESFVDIIKS  246 (248)
T ss_dssp             HHTSTTCCEE-EECGGGG------STTHHHHHHH
T ss_pred             HHCCCCCCEE-EEECHHC------CHHHHHHHHH
T ss_conf             8567898979-9622307------9899999998


No 21 
>>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} (A:228-444)
Probab=76.76  E-value=4.7  Score=20.24  Aligned_cols=95  Identities=7%  Similarity=-0.099  Sum_probs=57.3

Q ss_pred             HHHH-HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             1245-77603789999887610689999974235575211123-742022210012334630111221356789999999
Q gi|254780537|r   64 SADA-IKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTD-GINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIR  141 (294)
Q Consensus        64 p~d~-~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~-~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~  141 (294)
                      ..++ ..++.||+++... ..|++-..+++....+..+|.... +........      ...-.++.+|.+...++++|.
T Consensus       115 ~~~~~~~~~~adv~v~ps-~~e~~~~~~~Eama~G~Pvi~~~~~~~~~~~~~~------~~~~g~~v~~~d~~~~a~~i~  187 (217)
T 1uqt_A          115 RKLLMKIFRYSDVGLVTP-LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN------ELTSALIVNPYDRDEVAAALD  187 (217)
T ss_dssp             HHHHHHHHHHCSEEEECC-SSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG------TCTTSEEECTTCHHHHHHHHH
T ss_pred             HHHHHHHHCCCEEEEECC-CCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHH------HHCCEEEECCCCHHHHHHHHH
T ss_conf             887642100025999687-5346781899999808988896189847978478------848808989799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             9986431888999999899863014
Q gi|254780537|r  142 KALTALDPSNAKKYELNAREYSEKI  166 (294)
Q Consensus       142 ~~L~~~dP~~~~~y~~N~~~~~~~l  166 (294)
                      +.| ..+++......+|+..+.++.
T Consensus       188 ~~l-~~~~~~~~~~~~~~~~~~~~~  211 (217)
T 1uqt_A          188 RAL-TMSLAERISRHAEMLDVIVKN  211 (217)
T ss_dssp             HHH-TCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHH-CCCHHHHHHHHHHHHHHHHHC
T ss_conf             998-399999999999999999977


No 22 
>>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (A:1-55,A:299-491)
Probab=76.69  E-value=5.4  Score=19.86  Aligned_cols=148  Identities=12%  Similarity=0.051  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCC----CHHHHHHCC
Q ss_conf             2135678999999999864318889999-99899863014553378998863078447369982665----214577529
Q gi|254780537|r  128 MSLTNAMIYIENIRKALTALDPSNAKKY-ELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGC----LVYLAEDFG  202 (294)
Q Consensus       128 ldp~~~~~~a~~I~~~L~~~dP~~~~~y-~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~a----f~Y~~~~yG  202 (294)
                      +-+.........|++.+-.-.|+..+.+ .+....+...+    ..++..+.    .+|.+|.....    +..|.+++|
T Consensus        56 iG~~~T~~~Lr~Ia~~fg~~i~~~~E~~Ia~e~~~~~~~l----~~~~~~l~----Gkrv~I~~~~~~~~~~~~~l~ELG  127 (248)
T 1m1n_A           56 FGPTKTIESLRAIAAKFDESIQKKCEEVIAKYKPEWEAVV----AKYRPRLE----GKRVMLYIGGLRPRHVIGAYEDLG  127 (248)
T ss_dssp             SSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHT----TCEEEECBSSSHHHHTHHHHHTTT
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHC----CCEEEEECCCHHHHHHHHHHHHCC
T ss_conf             7336899999999998588506789999999999999999----99998717----983677368511799999999879


Q ss_pred             CEEEEECCCCCCCC--------------C-CHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             72887226886400--------------0-78999999976201697189982789979999999982993444320123
Q gi|254780537|r  203 FKSLYLWPINSDSE--------------R-SPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVLYVDS  267 (294)
Q Consensus       203 l~~~~~~~~~~~~e--------------p-s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~  267 (294)
                      ++++++.......+              . -..+..++.+.|++.+...+|.     +..-+.+++..|++.......|-
T Consensus       128 m~vv~~~~~~~~~~~~~~~~~~l~~~~~i~dd~d~~E~~~~i~~~~PDLi~g-----~~~ek~~a~k~giP~~~~~~~d~  202 (248)
T 1m1n_A          128 MEVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGS-----GIKEKFIFQKMGIPFREMHSWDY  202 (248)
T ss_dssp             CEEEEEEESSCCHHHHHTTTTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEE-----CHHHHHHHHHTTCCEEESSSGGG
T ss_pred             CEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCEEEE-----CCCHHHHHHHCCCCEEECCCCCC
T ss_conf             9799997057877899999986799878973899999999998539999998-----98407999982999700776546


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             78777886899999999999998620
Q gi|254780537|r  268 LSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       268 l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                      .+.    --+|-+. ..-++.|..+|
T Consensus       203 ~~p----y~Gy~Ga-~~la~~i~~al  223 (248)
T 1m1n_A          203 SGP----YHGFDGF-AIFARDMDMTL  223 (248)
T ss_dssp             CCC----CSHHHHH-HHHHHHHHHHH
T ss_pred             CCC----CCCHHHH-HHHHHHHHHHH
T ss_conf             888----5358669-99999999997


No 23 
>>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} (A:)
Probab=76.67  E-value=5.1  Score=19.99  Aligned_cols=75  Identities=12%  Similarity=0.132  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEE
Q ss_conf             337899886307844736998266521457752972887226886400078999999976201-----------697189
Q gi|254780537|r  169 SILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFI  237 (294)
Q Consensus       169 l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~i  237 (294)
                      +...++..+...+..++.+++|.|.|               .+.++..+|+.++.++.+.||+           .+++.+
T Consensus       142 ~~~q~~~~~~~~~~~~~~vIAYEPvW---------------AIGtg~~as~e~i~~v~~~Ir~~l~~~~~~~~a~~v~il  206 (247)
T 1ney_A          142 VERQLNAVLEEVKDFTNVVVAYEPVX---------------AIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRIL  206 (247)
T ss_dssp             HHHHHHHHHHHCCCCTTEEEEECCGG---------------GTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEE
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCEE---------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCEEE
T ss_conf             99999999730423462699746630---------------457899999899999999999999986043014676089


Q ss_pred             EEECCCCHHHHHHHHHHHCCCE
Q ss_conf             9827899799999999829934
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~  259 (294)
                       +....++.-+..+....++.-
T Consensus       207 -YGGSV~~~N~~~l~~~~~iDG  227 (247)
T 1ney_A          207 -YGGSANGSNAVTFKDKADVDG  227 (247)
T ss_dssp             -EESSCCTTTGGGGTTCTTCCE
T ss_pred             -ECCCCCHHHHHHHHCCCCCCE
T ss_conf             -648889879999956779995


No 24 
>>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthase, two rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* (A:227-414)
Probab=75.08  E-value=4.2  Score=20.59  Aligned_cols=87  Identities=16%  Similarity=0.137  Sum_probs=52.5

Q ss_pred             HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC-CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             776037899998876106899999742355752111237-4202221001233463011122135678999999999864
Q gi|254780537|r   68 IKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDG-INPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTA  146 (294)
Q Consensus        68 ~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~  146 (294)
                      .-++.||+++... ..|++-..+++....+..+|...-+ +..+-         ....-+|.+|.+...++++|.+.| +
T Consensus       100 ~~~~~adi~i~~s-~~e~~~~~l~Ea~a~G~pvI~s~~~~~~~~i---------~~~~g~~~~~~d~~~la~~i~~~l-~  168 (188)
T 3fro_A          100 ELYGSVDFVIIPS-YFEPFGLVALEAMCLGAIPIASAVGGLRDII---------TNETGILVKAGDPGELANAILKAL-E  168 (188)
T ss_dssp             HHHTTCSEEEECB-SCCSSCHHHHHHHHTTCEEEEESSTHHHHHC---------CTTTCEEECTTCHHHHHHHHHHHH-H
T ss_pred             HHHHHHCCCCCCC-CCCCCCHHHHHHHHCCCCEEEECCCCCHHHE---------ECCCEEEECCCCHHHHHHHHHHHH-H
T ss_conf             9876203354445-4556437999999869989993899817607---------889589977999999999999998-3


Q ss_pred             HHHHHHHHHHHHHHHHHCC
Q ss_conf             3188899999989986301
Q gi|254780537|r  147 LDPSNAKKYELNAREYSEK  165 (294)
Q Consensus       147 ~dP~~~~~y~~N~~~~~~~  165 (294)
                      .+|+....+.+|+.++..+
T Consensus       169 ~~~~~~~~~~~~a~~~~~~  187 (188)
T 3fro_A          169 LSRSDLSKFRENCKKRAMS  187 (188)
T ss_dssp             HTTTTTHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHH
T ss_conf             7999999999999999996


No 25 
>>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 1ml1_A 2wsr_A 2v2h_A 2v2d_A 1dkw_A 2vei_A 2vek_A* 2vel_A ... (A:)
Probab=74.46  E-value=6.1  Score=19.48  Aligned_cols=91  Identities=13%  Similarity=0.235  Sum_probs=60.1

Q ss_pred             HHHHHHHHCCCCC--CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEE
Q ss_conf             7899886307844--736998266521457752972887226886400078999999976201-----------697189
Q gi|254780537|r  171 LPLKTRIEKVDPE--KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFI  237 (294)
Q Consensus       171 ~~~~~~~~~~p~~--~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~i  237 (294)
                      ..++..+..++..  ++.+|+|.|.|               .+.++..+|+.++.++...||+           .+++++
T Consensus       145 ~ql~~~l~~i~~~~~~~~iIAYEPvw---------------AIGtg~~as~~~i~~~~~~Ir~~~~~~~~~~~~~~v~il  209 (250)
T 2j27_A          145 TQIAAIAKKLKKADWAKVVIAYEAVW---------------AIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRIL  209 (250)
T ss_dssp             HHHHHHHHTCCGGGGGGEEEEEECGG---------------GTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEE
T ss_pred             HHHHHHHHHHHHHHHCCEEEEECCEE---------------ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEE
T ss_conf             87754200023443114156504123---------------126554455055677778899999985132133777489


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             98278997999999998299344432012378777886899999999
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF  284 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~  284 (294)
                       +....++.-+..++...++.-. +.-.-+|      ...|.++++.
T Consensus       210 -YGGSV~~~N~~~l~~~~~vDG~-LvG~asl------~~~f~~Ii~~  248 (250)
T 2j27_A          210 -YGGSVNGKNARTLYQQRDVNGF-LVGGASL------KPEFVDIIKA  248 (250)
T ss_dssp             -EESSCCTTTHHHHHTSTTCCEE-EESGGGG------STTHHHHHHT
T ss_pred             -ECCCCCHHHHHHHHCCCCCCEE-EECHHHC------CHHHHHHHHH
T ss_conf             -7189898799999668899978-9522647------8799999996


No 26 
>>3gvg_A Triosephosphate isomerase; cytoplasm, gluconeogenesis, glycolysis, pentose shunt, structural genomics; 1.55A {Mycobacterium tuberculosis} (A:)
Probab=73.97  E-value=6.3  Score=19.40  Aligned_cols=94  Identities=9%  Similarity=0.133  Sum_probs=59.4

Q ss_pred             HHHHHHHHCCCCC--CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEE
Q ss_conf             7899886307844--736998266521457752972887226886400078999999976201-----------697189
Q gi|254780537|r  171 LPLKTRIEKVDPE--KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFI  237 (294)
Q Consensus       171 ~~~~~~~~~~p~~--~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~i  237 (294)
                      +.++..+..++..  ++.+++|.|.|               .+..+..+|+.++.++.++||+           .+++++
T Consensus       172 ~Ql~~~l~~i~~~~~~~iiIAYEPvW---------------AIGtg~~as~e~i~~v~~~IR~~l~~~~~~~~~~~v~Il  236 (283)
T 3gvg_A          172 EQLRGSLAGLLAEQIGSVVIAYEPVW---------------AIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVL  236 (283)
T ss_dssp             HHHHHHTTTCCHHHHTTCEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTCCEE
T ss_pred             HHHHHHHHCCCCCCCCEEEEEECCEE---------------CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEE
T ss_conf             98997762033345532899953410---------------236666687688899999999999875175342777588


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             9827899799999999829934443201237877788689999999999
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSL  286 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~  286 (294)
                       +....++.-+..++...++.-. +     +|...-..++|.++++.-.
T Consensus       237 -YGGSV~~~N~~~l~~~~~iDG~-L-----VG~asl~~~~f~~Ii~~~~  278 (283)
T 3gvg_A          237 -YGGSVNAKNVGDIVAQDDVDGG-L-----VGGASLDGEHFATLAAIAA  278 (283)
T ss_dssp             -ECSCCCTTTHHHHHTSTTCCEE-E-----ECGGGGSHHHHHHHHHHHH
T ss_pred             -ECCCCCHHHHHHHHCCCCCCEE-E-----ECHHHCCHHHHHHHHHHHC
T ss_conf             -5089798799999567898868-8-----3056579899999999970


No 27 
>>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} (A:)
Probab=73.93  E-value=6.3  Score=19.39  Aligned_cols=94  Identities=12%  Similarity=0.140  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEE
Q ss_conf             3378998863078447369982665214577529728872268864000789999999762016-----------97189
Q gi|254780537|r  169 SILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFI  237 (294)
Q Consensus       169 l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~i  237 (294)
                      +...+...+...+..++.+++|.|.|               .+..+..+|+.++.++.++|++.           +++++
T Consensus       162 ~~~Ql~~~~~~~~~~~~~vIAYEPvW---------------AIGtg~~as~~~i~~v~~~IR~~l~~~~~~~~~~~v~Il  226 (275)
T 1mo0_A          162 NFRQLQAIVDKGVSWENIVIAYEPVW---------------AIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRII  226 (275)
T ss_dssp             HHHHHHHHHTTTCCSTTEEEEECCGG---------------GTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEE
T ss_pred             HHHHHHHHHCCCCCCCCEEEEECCEE---------------ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEE
T ss_conf             99999998523555455178867654---------------037899999999999999999999986087661876489


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf             982789979999999982993444320123787778868999999999
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFS  285 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N  285 (294)
                       +....++.-+..++...++.-. ++-.-+|      ..+++++++.-
T Consensus       227 -YGGSV~~~N~~~l~~~~~iDG~-LVG~asl------~~ef~~ii~~~  266 (275)
T 1mo0_A          227 -YGGSVTADNAAELGKKPDIDGF-LVGGASL------KPDFVKIINAR  266 (275)
T ss_dssp             -EESSCCTTTHHHHTTSTTCCEE-EESGGGG------STHHHHHHHHH
T ss_pred             -ECCCCCHHHHHHHHCCCCCCEE-EEEHHHC------CHHHHHHHHHH
T ss_conf             -6488898799998568898869-9403756------86699999999


No 28 
>>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha JMP134} (A:1-161)
Probab=73.36  E-value=6.5  Score=19.30  Aligned_cols=93  Identities=10%  Similarity=0.060  Sum_probs=57.7

Q ss_pred             HHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCC---EEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE-CCCCHH
Q ss_conf             789988630784473699826652145775297---2887226886400078999999976201697189982-789979
Q gi|254780537|r  171 LPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGF---KSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSE-STNSDQ  246 (294)
Q Consensus       171 ~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl---~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e-~~~~~~  246 (294)
                      .++...++..+.++-.+++....++++.+....   ..+... ..-+.+|+..++.++.+.+++.++.+|+.= ....-.
T Consensus        25 ~~l~~~l~~~~~~~~liv~~~~~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~v~~~~~~~~~~~~d~IiaiGGGs~~D  103 (161)
T 3jzd_A           25 SQVAAEVERLGAKRALVLCTPNQQAEAERIADLLGPLSAGVY-AGAVXHVPIESARDATARAREAGADCAVAVGGGSTTG  103 (161)
T ss_dssp             GGHHHHHHHTTCSCEEEECCGGGHHHHHHHHHHHGGGEEEEE-CCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE-ECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf             999999997399869999817655049999998613771899-4521398989999999875314897898427855443


Q ss_pred             HHHHHHHHHCCCEEEEEE
Q ss_conf             999999982993444320
Q gi|254780537|r  247 PAKQVAYETNASYGGVLY  264 (294)
Q Consensus       247 ~~~~ia~e~~~~~~~~~~  264 (294)
                      .++.+|-..+.+.+.+.+
T Consensus       104 ~aK~~a~~~~~p~i~vpT  121 (161)
T 3jzd_A          104 LGKAIALETGXPIVAIPT  121 (161)
T ss_dssp             HHHHHHHHHCCCEEEEEC
T ss_pred             HHHHHHHCCCCEEEEECC
T ss_conf             443101121220576413


No 29 
>>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} (A:)
Probab=72.69  E-value=4.7  Score=20.27  Aligned_cols=92  Identities=13%  Similarity=0.121  Sum_probs=57.7

Q ss_pred             HHHHHHHHCCCC--CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEE
Q ss_conf             789988630784--47369982665214577529728872268864000789999999762016-----------97189
Q gi|254780537|r  171 LPLKTRIEKVDP--EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFI  237 (294)
Q Consensus       171 ~~~~~~~~~~p~--~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~i  237 (294)
                      +.++..+..++.  .++.+++|.|.|.               +.++..+++.++.++.+.|++-           +++ |
T Consensus       152 ~Ql~~~l~~v~~~~~~~~iIAYEPvwA---------------IGtg~~a~~~~i~~~~~~IR~~l~~~~~~~~~~~v~-i  215 (261)
T 1m6j_A          152 AQLKAINNAISKEAWKNIILAYEPVWA---------------IGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATR-I  215 (261)
T ss_dssp             HHHHHHHHHSCTGGGGGEEEEECCGGG---------------SSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSC-E
T ss_pred             HHHHHHHCCCCHHHHCCCEEEECCEEE---------------ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-E
T ss_conf             999998717987773474577565662---------------168999999999999999999998750254517773-8


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             98278997999999998299344432012378777886899999999
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF  284 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~  284 (294)
                      ++-...++..+..+....++.-. +.-.-+|     ..++|.++++.
T Consensus       216 lYGGsV~~~n~~~l~~~~~vDG~-LvG~asl-----~~~~f~~ii~~  256 (261)
T 1m6j_A          216 QYGGSVNPANCNELAKKADIDGF-LVGGASL-----DAAKFKTIINS  256 (261)
T ss_dssp             EECSCCCTTTHHHHHTSTTCCEE-EESGGGG-----SHHHHHHHHGG
T ss_pred             EECCCCCHHHHHHHHCCCCCCEE-EEEHHHC-----CHHHHHHHHHH
T ss_conf             85388898799998567898848-8305656-----88999999999


No 30 
>>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor} (A:)
Probab=71.51  E-value=7.2  Score=19.02  Aligned_cols=73  Identities=14%  Similarity=0.151  Sum_probs=54.1

Q ss_pred             HHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEEE
Q ss_conf             78998863078447369982665214577529728872268864000789999999762016-----------9718998
Q gi|254780537|r  171 LPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIFS  239 (294)
Q Consensus       171 ~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if~  239 (294)
                      ......+..++..++.+|+|.|.|.               +..+..+|+.++.++.+.|++.           +++++ +
T Consensus       144 ~q~~~~~~~~~~~~~~iIAYEPvwA---------------IGtg~~as~~~i~~v~~~Ir~~l~~~~~~~~~~~v~Il-Y  207 (259)
T 2i9e_A          144 RQTKAIAAKVNDWSNVVIAYEPVWA---------------IGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQ-Y  207 (259)
T ss_dssp             HHHHHHHHHCSCCTTEEEEECCGGG---------------TTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEE-E
T ss_pred             HHHHHHHCCCCCCCCEEEEECCHHH---------------HCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEE-E
T ss_conf             7776530222344567998564775---------------05676666145677888999888630145453678688-6


Q ss_pred             ECCCCHHHHHHHHHHHCCCE
Q ss_conf             27899799999999829934
Q gi|254780537|r  240 ESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       240 e~~~~~~~~~~ia~e~~~~~  259 (294)
                      -...++.-+..+....++.-
T Consensus       208 GGSV~~~n~~~l~~~~~vDG  227 (259)
T 2i9e_A          208 GGSVTAANCKELASQPDIDG  227 (259)
T ss_dssp             CSCCCTTTHHHHHTSTTCCE
T ss_pred             CCCCCHHHHHHHHCCCCCCE
T ss_conf             17877716999956779896


No 31 
>>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} (A:)
Probab=70.86  E-value=7.4  Score=18.93  Aligned_cols=85  Identities=8%  Similarity=0.083  Sum_probs=56.3

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC----------CCCEEEEEECCCCHHHHHHHH
Q ss_conf             4736998266521457752972887226886400078999999976201----------697189982789979999999
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS----------HKIKFIFSESTNSDQPAKQVA  252 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~----------~~v~~if~e~~~~~~~~~~ia  252 (294)
                      .++.++.|.|.|               .+..+..+++.++.++...|++          .+++ |++....++..+..++
T Consensus       159 ~~~~iIAYEPvw---------------aIGtg~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~v~-ilYGGsV~~~n~~~l~  222 (255)
T 1tre_A          159 FEGAVIAYEPVW---------------AIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVI-IQYGGSVNASNAAELF  222 (255)
T ss_dssp             GTTCEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCE-EEECSCCCTTTHHHHH
T ss_pred             HCCCEEEECHHH---------------HCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEE-EEECCCCCHHHHHHHH
T ss_conf             246256642333---------------205554667520134668888888512333338602-9854877887999996


Q ss_pred             HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             9829934443201237877788689999999999999
Q gi|254780537|r  253 YETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKI  289 (294)
Q Consensus       253 ~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l  289 (294)
                      .+.++.-. +.     |...-..+++.++++.-.+.+
T Consensus       223 ~~~~iDG~-Lv-----G~asl~~~~f~~ii~~~~~~~  253 (255)
T 1tre_A          223 AQPDIDGA-LV-----GGASLKADAFAVIVKAAEAAK  253 (255)
T ss_dssp             TSTTCCEE-EE-----SGGGGCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEE-EE-----CHHHCCHHHHHHHHHHHHHHH
T ss_conf             67799879-95-----356568889999999999751


No 32 
>>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} (A:1-160)
Probab=70.14  E-value=7.7  Score=18.82  Aligned_cols=88  Identities=10%  Similarity=0.034  Sum_probs=59.0

Q ss_pred             HHHCCCCCCCEEEEECCCCHHHHHHC-CCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE-ECCCCHHHHHHHHH
Q ss_conf             86307844736998266521457752-97288722688640007899999997620169718998-27899799999999
Q gi|254780537|r  176 RIEKVDPEKRWFVTSEGCLVYLAEDF-GFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFS-ESTNSDQPAKQVAY  253 (294)
Q Consensus       176 ~~~~~p~~~~~~v~~H~af~Y~~~~y-Gl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~-e~~~~~~~~~~ia~  253 (294)
                      .+.....++..+++....++++.+-. .|+..++.. .-+.+|+-.++.++.+.+++.++.+|+. -....-..++.+|.
T Consensus        31 ~~~~~g~~~~liitd~~~~~~~~~v~~~l~~~~i~~-~~~~~~~~~~v~~~~~~~~~~~~D~iiaiGGGs~~D~aK~~A~  109 (160)
T 3iv7_A           31 EVERRGSAKVXVIAGEREXSIAHKVASEIEVAIWHD-EVVXHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAX  109 (160)
T ss_dssp             HHHHHTCSSEEEECCGGGHHHHHHHTTTSCCSEEEC-CCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHH
T ss_pred             HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCEEEC-CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
T ss_conf             999759975999908427769999999710018976-7427979999999999986317988999346644226667553


Q ss_pred             HHCCCEEEEEE
Q ss_conf             82993444320
Q gi|254780537|r  254 ETNASYGGVLY  264 (294)
Q Consensus       254 e~~~~~~~~~~  264 (294)
                      ..+.++..+.+
T Consensus       110 ~~~~p~i~~pT  120 (160)
T 3iv7_A          110 TTALPIVAIPT  120 (160)
T ss_dssp             HHCCCEEEEEC
T ss_pred             HCCCCCEECCC
T ss_conf             03455210032


No 33 
>>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} (A:174-357)
Probab=68.87  E-value=8.1  Score=18.65  Aligned_cols=93  Identities=17%  Similarity=0.122  Sum_probs=57.6

Q ss_pred             HHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             24577603789999887610689999974235575211123742022210012334630111221356789999999998
Q gi|254780537|r   65 ADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKAL  144 (294)
Q Consensus        65 ~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L  144 (294)
                      ....-++.||+++.. ...|++-..+++....+..+|....+.......+      +.+-.++.+|.+...++++|...+
T Consensus        90 ~~~~~~~~ad~~v~~-~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~v~~------~~~g~~~~~~~~~~~~~~~i~~l~  162 (184)
T 2iw1_A           90 DVSELMAAADLLLHP-AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD------ANCGTVIAEPFSQEQLNEVLRKAL  162 (184)
T ss_dssp             CHHHHHHHCSEEEEC-CSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH------HTCEEEECSSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCEEEEECCCCCHHHHHCC------CCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             444222333344432-2223433023310035604661489975888416------982699869999999999999997


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             6431888999999899863014
Q gi|254780537|r  145 TALDPSNAKKYELNAREYSEKI  166 (294)
Q Consensus       145 ~~~dP~~~~~y~~N~~~~~~~l  166 (294)
                        .+|+....+.+|+.++.++.
T Consensus       163 --~~~~~~~~~~~~a~~~~~~~  182 (184)
T 2iw1_A          163 --TQSPLRMAWAENARHYADTQ  182 (184)
T ss_dssp             --HCHHHHHHHHHHHHHHHHHS
T ss_pred             --CCHHHHHHHHHHHHHHHHHC
T ss_conf             --69999999999999999973


No 34 
>>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi} (A:)
Probab=68.12  E-value=8.4  Score=18.55  Aligned_cols=193  Identities=9%  Similarity=0.097  Sum_probs=100.3

Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             18914899962688980120227124577603789999887610689999974235575211123742022210012334
Q gi|254780537|r   41 AKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDS  120 (294)
Q Consensus        41 ~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~  120 (294)
                      ..+.++|. +.||-  +|-    ..-.+.+.+..+.+..|.-.-.--.+.+++..-+-.++-=|+         -....+
T Consensus        34 ~~~~v~v~-i~P~~--~~L----~~~~~~~~q~~~~~gag~~TGeiS~~mLkd~g~~~viiGHSE---------RR~~f~   97 (244)
T 2v5b_A           34 FDHDVQCV-VAPTF--LHI----PMTKARLTNPKFQIAAQNAGNADALASLKDYGISWVVLGHSE---------RRLYYG   97 (244)
T ss_dssp             CCSCCEEE-EEECG--GGH----HHHHHHCCCTTEEEEESCCCCHHHHHHHHHTTCCEEEECCHH---------HHHHSC
T ss_pred             CCCCCEEE-ECCCC--CCH----HHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCHH---------HHHHHC
T ss_conf             67882599-77970--049----999987503660120002432156888987652243223311---------012105


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC--CCEEEEECCCCHH
Q ss_conf             6301112213567899999999986431--88899999989986301455337899886307844--7369982665214
Q gi|254780537|r  121 EPNPHAWMSLTNAMIYIENIRKALTALD--PSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPE--KRWFVTSEGCLVY  196 (294)
Q Consensus       121 ~~dpH~Wldp~~~~~~a~~I~~~L~~~d--P~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~--~~~~v~~H~af~Y  196 (294)
                      +.      |-.-..+...++...|.-+.  .+..+.++++     ...+-+...++..+..++..  ++.+++|.|.|. 
T Consensus        98 Et------~~~i~~Kv~~al~~gl~pIvCiGE~~~~r~~~-----~~~~~l~~Ql~~~l~~i~~~~~~~~vIAYEPvwa-  165 (244)
T 2v5b_A           98 ET------NEIVAEKVAQAXAAGFHVIVCVGETNEEREAG-----RTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWA-  165 (244)
T ss_dssp             CC------HHHHHHHHHHHHHTTCEEEEEECCCHHHHHTT-----CHHHHHHHHHHHHHTTCCTGGGGGEEEEECCHHH-
T ss_pred             CC------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC-----CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHC-
T ss_conf             30------78999999999852870589854631101235-----1777777766665522331134561687353211-


Q ss_pred             HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             577529728872268864000789999999762016-----------971899827899799999999829934443201
Q gi|254780537|r  197 LAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIFSESTNSDQPAKQVAYETNASYGGVLYV  265 (294)
Q Consensus       197 ~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~  265 (294)
                                    +..+..||+.++.++.+.||+.           ++++ ++....++.-+..++...++.-. ++-.
T Consensus       166 --------------IGtg~~as~~~i~~~~~~Ir~~~~~~~~~~~~~~v~i-lYGGsV~~~N~~~~~~~~~vDG~-LvG~  229 (244)
T 2v5b_A          166 --------------IGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRI-LYGGSVTAKNARTLYQMRDINGF-LVGG  229 (244)
T ss_dssp             --------------HSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEE-EECSCCCHHHHHHHHTSTTCCEE-EESG
T ss_pred             --------------CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE-EECCCCCHHHHHHHHCCCCCCEE-EECH
T ss_conf             --------------3445455630233457899999987417433577528-97388887499999678899968-9531


Q ss_pred             CCCCCCCCCCCCHHHHHH
Q ss_conf             237877788689999999
Q gi|254780537|r  266 DSLSKPDGPAPTYLDLLR  283 (294)
Q Consensus       266 d~l~~~~~~~~~Y~~~m~  283 (294)
                      -+|      ...|+++++
T Consensus       230 asl------~~~f~~Ii~  241 (244)
T 2v5b_A          230 ASL------KPEFVEIIE  241 (244)
T ss_dssp             GGS------STTHHHHHH
T ss_pred             HHC------CHHHHHHHH
T ss_conf             646------889999999


No 35 
>>2a3n_A Putative glucosamine-fructose-6-phosphate aminotransferase; 16423107, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Salmonella typhimurium LT2} (A:1-192)
Probab=67.01  E-value=8.8  Score=18.40  Aligned_cols=80  Identities=9%  Similarity=0.044  Sum_probs=33.7

Q ss_pred             CCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH--HHHHHCCCE
Q ss_conf             447369982665214577529728872268864000789999999762016971899827899799999--999829934
Q gi|254780537|r  182 PEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQ--VAYETNASY  259 (294)
Q Consensus       182 ~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~--ia~e~~~~~  259 (294)
                      ..++.++.....-...++.+.....-+-+......+....+......++++.+-.+|.-+..++...+.  .+++.|+++
T Consensus        53 ~a~~i~i~G~G~S~~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sg~s~~~~~~~~~ak~~g~~i  132 (192)
T 2a3n_A           53 GFSSLFFASVGGSLAPXXAINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTKESVAIAEWCKAQGIRV  132 (192)
T ss_dssp             CCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEEHHHHHHHCCTTCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEE
T ss_pred             CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99979999711789999999999999859986998416754458887899997999968999767999999998630121


Q ss_pred             EE
Q ss_conf             44
Q gi|254780537|r  260 GG  261 (294)
Q Consensus       260 ~~  261 (294)
                      +.
T Consensus       133 I~  134 (192)
T 2a3n_A          133 VA  134 (192)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             13


No 36 
>>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3} (A:104-204)
Probab=66.84  E-value=3.6  Score=21.03  Aligned_cols=84  Identities=5%  Similarity=-0.103  Sum_probs=55.0

Q ss_pred             HHCCCCCCCEEEEECCCC----HHHHHHCCCEEEEECCCCCC----CCCCHHHHHHHHHHHCCCCCEEEEEEC-CC-CHH
Q ss_conf             630784473699826652----14577529728872268864----000789999999762016971899827-89-979
Q gi|254780537|r  177 IEKVDPEKRWFVTSEGCL----VYLAEDFGFKSLYLWPINSD----SERSPSMMRHAINQMRSHKIKFIFSES-TN-SDQ  246 (294)
Q Consensus       177 ~~~~p~~~~~~v~~H~af----~Y~~~~yGl~~~~~~~~~~~----~eps~~~l~~~~~~ik~~~v~~if~e~-~~-~~~  246 (294)
                      ++.+-.++-.+++|-+..    .-+.+++|+++....+..-+    ...++.++.+....+.+.+..+||.-- +. .-.
T Consensus         7 l~~l~~~ri~V~py~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adai~l~Ct~l~~~~   86 (101)
T 2eq5_A            7 LALAYGRRVGVLNLTEETPKVIRSILGNNLIAEDHPSGVSNTLDLLTDWGRREVINAAKRLKEKGVEVIALGCTGMSTIG   86 (101)
T ss_dssp             HHHTTCSSEEEECSSSCCCHHHHHHHGGGEEEEECCTTCCSGGGGGSHHHHHHHHHHHHHHHHTTCSEEEECCTHHHHHT
T ss_pred             HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
T ss_conf             99972786356650462699999999874010134402210012457889999999999998669988998068720255


Q ss_pred             HHHHHHHHHCCCEE
Q ss_conf             99999998299344
Q gi|254780537|r  247 PAKQVAYETNASYG  260 (294)
Q Consensus       247 ~~~~ia~e~~~~~~  260 (294)
                      .++.|.+++|+|++
T Consensus        87 ~~~~Le~~lgvPVi  100 (101)
T 2eq5_A           87 IAPVLEEEVGIPVI  100 (101)
T ss_dssp             CHHHHHHHHSSCEE
T ss_pred             HHHHHHHCCCCEEE
T ss_conf             58988435898698


No 37 
>>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} (A:)
Probab=66.68  E-value=9  Score=18.36  Aligned_cols=41  Identities=22%  Similarity=0.377  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHCCCCCEE-EEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             899999997620169718-99827899799999999829934443
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKF-IFSESTNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~-if~e~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                      ...|+.+++.+++.+|++ +|.+|  ....++. |+++|++.+++
T Consensus       113 ~~~L~~~i~~l~~~gI~VSLFidP--~~~qi~~-A~~~GAd~VEL  154 (243)
T 1m5w_A          113 RDKMRDACKRLADAGIQVSLFIDA--DEEQIKA-AAEVGAPFIEI  154 (243)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECS--CHHHHHH-HHHTTCSEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEEEEECC--CHHHHHH-HHHCCCCEEEE
T ss_conf             889999999998659707998368--8899999-99709995751


No 38 
>>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei} (A:)
Probab=65.12  E-value=9.6  Score=18.16  Aligned_cols=41  Identities=20%  Similarity=0.274  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHCCCCCEE-EEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             899999997620169718-99827899799999999829934443
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKF-IFSESTNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~-if~e~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                      ...|+.+++.+|+.+|++ +|.+|  ....++. |+++|+..+++
T Consensus       141 ~~~L~~~i~~Lk~~gIrVSLFiDP--~~~qi~~-A~~~GAd~VEL  182 (278)
T 3gk0_A          141 FDAVRAACKQLADAGVRVSLFIDP--DEAQIRA-AHETGAPVIEL  182 (278)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECS--CHHHHHH-HHHHTCSEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECC--CHHHHHH-HHHHCCCEEEE
T ss_conf             878999999998728727999645--3144778-77616676765


No 39 
>>1nri_A Hypothetical protein HI0754; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Haemophilus influenzae} (A:1-233)
Probab=64.81  E-value=9.7  Score=18.13  Aligned_cols=127  Identities=8%  Similarity=0.016  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH------
Q ss_conf             11221356789999999998643188899999989986301455337899886307844736998266521457------
Q gi|254780537|r  125 HAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLA------  198 (294)
Q Consensus       125 H~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~------  198 (294)
                      +.+.++.+...+.+.+.+.....-    +    +.+.   .++...+.++...+.+...++.++..+..-.+.+      
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~---~~~~~~~~~~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~   92 (233)
T 1nri_A           24 SVDIDRQSTLEIVRLXNEEDKLVP----L----AIES---CLPQISLAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASE   92 (233)
T ss_dssp             GTTGGGSCHHHHHHHHHHHHTHHH----H----HHHH---HHHHHHHHHHHHHHHHHTTCCEEEEESHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHH----H----HHHH---HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
T ss_conf             798100899999999998659999----9----9999---8999999999999999739979998176569999999998


Q ss_pred             --HHCCCEEEEE-------------CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH--HHHHHHCCCEEE
Q ss_conf             --7529728872-------------26886400078999999976201697189982789979999--999982993444
Q gi|254780537|r  199 --EDFGFKSLYL-------------WPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAK--QVAYETNASYGG  261 (294)
Q Consensus       199 --~~yGl~~~~~-------------~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~--~ia~e~~~~~~~  261 (294)
                        +.+++....+             .+...+..........-...++++.+-.++.-+..++...+  ..+++-|++++.
T Consensus        93 l~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~dlvI~iS~sG~t~~~~~~~~~ak~~g~~vI~  172 (233)
T 1nri_A           93 CPPTFGVSTEXVKGIIAGGECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTIS  172 (233)
T ss_dssp             HHHHHCCCTTSEEEEETTCTHHHHSCCTTGGGCTTHHHHHHHHTTCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEE
T ss_pred             HCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf             64867888211068771698787665440135488899999983489888489986899977789899998751662566


Q ss_pred             E
Q ss_conf             3
Q gi|254780537|r  262 V  262 (294)
Q Consensus       262 ~  262 (294)
                      +
T Consensus       173 I  173 (233)
T 1nri_A          173 I  173 (233)
T ss_dssp             E
T ss_pred             E
T ss_conf             6


No 40 
>>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} (A:)
Probab=61.48  E-value=11  Score=17.73  Aligned_cols=75  Identities=12%  Similarity=0.174  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEE
Q ss_conf             337899886307844736998266521457752972887226886400078999999976201-----------697189
Q gi|254780537|r  169 SILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFI  237 (294)
Q Consensus       169 l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~i  237 (294)
                      +.......+...+..++.+++|.|.|               .+..+..+|+.++.++.+.||+           .+++++
T Consensus       143 ~~~q~~~~~~~~~~~~~~iIAYEPvw---------------AIGtg~~as~~~i~~~~~~Ir~~l~~~~~~~~~~~i~il  207 (248)
T 1r2r_A          143 VFEQTKVIADNVKDWSKVVLAYEPVW---------------AIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRII  207 (248)
T ss_dssp             HHHHHHHHHHTCSCGGGEEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEE
T ss_pred             HHHHHHHHHCCCCCCCEEEEEECCEE---------------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEE
T ss_conf             99999987425653234899746686---------------127899998499999999999999974227663865299


Q ss_pred             EEECCCCHHHHHHHHHHHCCCE
Q ss_conf             9827899799999999829934
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~  259 (294)
                       +....++.-+..++...++.-
T Consensus       208 -YGGSV~~~n~~~~~~~~~vDG  228 (248)
T 1r2r_A          208 -YGGSVTGATCKELASQPDVDG  228 (248)
T ss_dssp             -ECSCCCTTTHHHHHTSTTCCE
T ss_pred             -ECCCCCHHHHHHHHCCCCCCE
T ss_conf             -768989769999956789897


No 41 
>>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} (A:)
Probab=61.15  E-value=11  Score=17.69  Aligned_cols=176  Identities=13%  Similarity=0.125  Sum_probs=90.0

Q ss_pred             CEEEEECHHHHHHHHHHCCCEEEEEE--EECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             28999752899999985189148999--6268898012022712457760378999988761068999997423557521
Q gi|254780537|r   24 KVVLSSFSIIGDITQNIAKDLVTVTT--LVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKII  101 (294)
Q Consensus        24 ~~Vv~s~~pl~~iv~~I~gd~v~V~~--li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i  101 (294)
                      .-|..++.-|..+.+.+.+..+.|-.  +-+....|++=|.||+.++.+.=.-+++  | .-|....             
T Consensus        37 v~i~P~~~~L~~~~~~~~~~~i~igAQnv~~~~~Ga~TGEvS~~~Lkd~G~~~vii--G-HSERR~~-------------  100 (252)
T 2btm_A           37 SVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVIL--G-HSERRQM-------------  100 (252)
T ss_dssp             EEEEECGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCHHHHHHHTCCEEEE--S-CHHHHHH-------------
T ss_pred             EEEECCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCHHHHHHHCCCEEEC--C-CCCHHHH-------------
T ss_conf             99979989999999987314521001343001341322243899998708530101--3-5201234-------------


Q ss_pred             CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             11237420222100123346301112213567899999999986431--8889999998998630145533789988630
Q gi|254780537|r  102 TVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALD--PSNAKKYELNAREYSEKIRNSILPLKTRIEK  179 (294)
Q Consensus       102 ~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~d--P~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~  179 (294)
                                       .++      .|-.-.+++..++...|.-+.  -+..+..+.     ....+-+...++..+..
T Consensus       101 -----------------f~E------t~~~i~~Kv~~al~~gl~pIlCvGE~~e~r~~-----~~~~~~~~~Ql~~~l~~  152 (252)
T 2btm_A          101 -----------------FAE------TDETVNKKVLAAFTRGLIPIICCGESLEEREA-----GQTNAVVASQVEKALAG  152 (252)
T ss_dssp             -----------------SCC------CHHHHHHHHHHHHHHTCEEEEEECCCHHHHHT-----TCHHHHHHHHHHHHHTT
T ss_pred             -----------------HCC------CHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC-----CHHHHHHHHHHHHHHCC
T ss_conf             -----------------323------27888999998652897489997034311121-----01146788887765414


Q ss_pred             CC--CCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEEEEECCCCHH
Q ss_conf             78--44736998266521457752972887226886400078999999976201-----------697189982789979
Q gi|254780537|r  180 VD--PEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFIFSESTNSDQ  246 (294)
Q Consensus       180 ~p--~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~if~e~~~~~~  246 (294)
                      ++  ..++.+++|.|.|               .+..+..+|+.++.++...|++           .+++. ++-...++.
T Consensus       153 v~~~~~~~ivIAYEPvW---------------AIGtg~~as~e~i~~~~~~Ir~~l~~~~~~~~~~~v~I-lYGGSV~~~  216 (252)
T 2btm_A          153 LTPEQVKQAVIAYEPIW---------------AIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRI-QYGGSVKPD  216 (252)
T ss_dssp             CCHHHHTTCEEEECCGG---------------GTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEE-EEESSCCTT
T ss_pred             CCHHCCCEEEEEECCEE---------------CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCE-EECCCCCHH
T ss_conf             31110231899973111---------------13555678826665567889988875316334066858-751897987


Q ss_pred             HHHHHHHHHCCCE
Q ss_conf             9999999829934
Q gi|254780537|r  247 PAKQVAYETNASY  259 (294)
Q Consensus       247 ~~~~ia~e~~~~~  259 (294)
                      -+..++...++.-
T Consensus       217 n~~~l~~~~~vDG  229 (252)
T 2btm_A          217 NIRDFLAQQQIDG  229 (252)
T ss_dssp             THHHHHTSTTCCE
T ss_pred             HHHHHHCCCCCCE
T ss_conf             9999966889987


No 42 
>>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, PGH; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A* (A:)
Probab=58.79  E-value=12  Score=17.42  Aligned_cols=73  Identities=10%  Similarity=0.085  Sum_probs=52.4

Q ss_pred             HHHHHHHHCCC--CCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEE
Q ss_conf             78998863078--44736998266521457752972887226886400078999999976201-----------697189
Q gi|254780537|r  171 LPLKTRIEKVD--PEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFI  237 (294)
Q Consensus       171 ~~~~~~~~~~p--~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~i  237 (294)
                      +.++..+..++  ..++.+|+|.|.|               .+..+..+|+.++.++.+.|++           .+++++
T Consensus       146 ~Ql~~~l~~i~~~~~~~~vIAYEPvW---------------AIGtg~~as~~~i~~v~~~Ir~~l~~~~~~~~~~~v~il  210 (251)
T 2vxn_A          146 SQTSAIAAKLTKDAWNQVVLAYEPVW---------------AIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRIL  210 (251)
T ss_dssp             HHHHHHHTTCCTGGGGGEEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEE
T ss_pred             HHHHHHHHCCCCHHCCCEEEEECCEE---------------EECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCEEE
T ss_conf             99999875266010254489856577---------------307898899899999999999999876062014762089


Q ss_pred             EEECCCCHHHHHHHHHHHCCCE
Q ss_conf             9827899799999999829934
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~  259 (294)
                       +-...++.-+..++...++.-
T Consensus       211 -YGGSV~~~N~~~~~~~~~vDG  231 (251)
T 2vxn_A          211 -YGGSVNAANAATLYAKPDING  231 (251)
T ss_dssp             -EESSCCTTTHHHHHTSTTCCE
T ss_pred             -ECCCCCHHHHHHHHCCCCCCE
T ss_conf             -668889889999956889896


No 43 
>>3hl0_A Maleylacetate reductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} (A:1-159)
Probab=55.58  E-value=14  Score=17.07  Aligned_cols=88  Identities=9%  Similarity=0.109  Sum_probs=55.9

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCHHHHH------HCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE-CCCC
Q ss_conf             8998863078447369982665214577------52972887226886400078999999976201697189982-7899
Q gi|254780537|r  172 PLKTRIEKVDPEKRWFVTSEGCLVYLAE------DFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSE-STNS  244 (294)
Q Consensus       172 ~~~~~~~~~p~~~~~~v~~H~af~Y~~~------~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e-~~~~  244 (294)
                      .+-..++..+.++-.+++....++.+.+      +.|+.   ... .-+.+|+...+.++.+.+++.+..+|+.= ....
T Consensus        24 ~l~~~l~~~g~~~~livtd~~~~~~~~~v~~~l~~~~~~---~~~-~~~~~~~~~~v~~~~~~~~~~~~d~iiaiGGGsv   99 (159)
T 3hl0_A           24 DVAEEIRRLGLSRALVLSTPQQKGDAEALASRLGRLAAG---VFS-EAAXHTPVEVTKTAVEAYRAAGADCVVSLGGGST   99 (159)
T ss_dssp             GHHHHHHHTTCCCEEEECCGGGHHHHHHHHHHHGGGEEE---EEC-CCCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCE---EEE-CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             999999973998699997842214799999986068828---996-2616999899999999999639988999589751


Q ss_pred             HHHHHHHHHHHCCCEEEEE
Q ss_conf             7999999998299344432
Q gi|254780537|r  245 DQPAKQVAYETNASYGGVL  263 (294)
Q Consensus       245 ~~~~~~ia~e~~~~~~~~~  263 (294)
                      -..++.+|-..+.+++.+.
T Consensus       100 iD~AK~~a~~~~~p~i~~p  118 (159)
T 3hl0_A          100 TGLGKAIALRTDAAQIVIP  118 (159)
T ss_dssp             HHHHHHHHHHHCCEEEEEE
T ss_pred             HHHHHHHHHCCCCCEEEEE
T ss_conf             1011232203678657740


No 44 
>>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone, THDP, metal, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* (A:196-343)
Probab=53.12  E-value=15  Score=16.82  Aligned_cols=84  Identities=14%  Similarity=0.183  Sum_probs=46.7

Q ss_pred             CCCCEEEEECH------HHHHHHHHHCCCEEEEEEEECCCC--CCCC-CCCCHHHHHHHCCCCEEEEECCCCCHHHHHHH
Q ss_conf             58828999752------899999985189148999626889--8012-02271245776037899998876106899999
Q gi|254780537|r   21 TQKKVVLSSFS------IIGDITQNIAKDLVTVTTLVEAGN--DSHS-YQVTSADAIKIQNADLILCNGLHLEETYMKYF   91 (294)
Q Consensus        21 ~~~~~Vv~s~~------pl~~iv~~I~gd~v~V~~li~~g~--dpH~-ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~   91 (294)
                      ++++.|++---      -+..+++..+..-+. ..+...+.  +-|. |--++.-...+.++|+++..|..+-.+.....
T Consensus        24 A~rpviv~G~g~~~a~~~l~~lae~~~~pv~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~~aDlvl~iG~~~~~~~~~~~  102 (148)
T 3hww_A           24 QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIG-DVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQW  102 (148)
T ss_dssp             TSCEEEEECBCCHHHHHHHHHHHHHHTCCEEE-CTTTCSCCSSCCHHHHTTSHHHHHHHTTCSEEEEESBCCCCHHHHHH
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEE-ECCCCCCCCCCCCCHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf             88647874034425689998767640476011-02567778764542102787677525762078613666655443333


Q ss_pred             HHCCCCCCCCCCCC
Q ss_conf             74235575211123
Q gi|254780537|r   92 TNLKKGTKIITVTD  105 (294)
Q Consensus        92 ~~~~~~~~~i~~~~  105 (294)
                      ....++.++|.+..
T Consensus       103 ~~~~~~~~~i~i~~  116 (148)
T 3hww_A          103 QASCEPEEYWIVDD  116 (148)
T ss_dssp             HHHCCCSEEEEEES
T ss_pred             CCCCCCCEEEECCC
T ss_conf             22478731697058


No 45 
>>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor; middle-chain acyl-COA synthetase, xenobiotic/medium-chain fatty acid-COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* (A:76-198)
Probab=51.97  E-value=16  Score=16.70  Aligned_cols=114  Identities=15%  Similarity=0.031  Sum_probs=60.3

Q ss_pred             HHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEE--CCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             863014553378998863078447369982665214577529728872--268864000789999999762016971899
Q gi|254780537|r  161 EYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYL--WPINSDSERSPSMMRHAINQMRSHKIKFIF  238 (294)
Q Consensus       161 ~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~--~~~~~~~eps~~~l~~~~~~ik~~~v~~if  238 (294)
                      ++.++...+-..+++.+ .+..+.+..+...+...|+.-.+|.-..+.  ..+++  ..++.++.   ..+++.+.+++|
T Consensus         3 el~~~~~~~a~~L~~~~-gi~~gd~V~i~~~n~~e~~~~~~a~~~~G~v~vpl~~--~~~~~~l~---~~l~~s~~~~ii   76 (123)
T 3c5e_A            3 ELSENSQQAANVLSGAC-GLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTI--QMKSTDIL---YRLQMSKAKAIV   76 (123)
T ss_dssp             HHHHHHHHHHHHHHTTT-CCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEECCT--TCCHHHHH---HHHHHHTCSEEE
T ss_pred             HHHHHHHHHHHHHHHHH-CCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEECCC--CCCHHHHH---HHHHHCCCCEEE
T ss_conf             99999999999988800-9799999999928969999999999984919993187--79999999---999851464899


Q ss_pred             EECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             8278997999999998299344432012378777886899999999
Q gi|254780537|r  239 SESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF  284 (294)
Q Consensus       239 ~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~  284 (294)
                      +++..-.+..+...+-...+..  ..++.-..  ....+|-+++..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~--~~~~~~~~~~~~  118 (123)
T 3c5e_A           77 AGDEVIQEVDTVASECPSLRIK--LLVSEKSC--DGWLNFKKLLNE  118 (123)
T ss_dssp             EETTTHHHHHHHGGGCTTCCEE--EEESSSCC--TTSEEHHHHHHH
T ss_pred             EECCCHHHHCCCCCCCCCCCEE--EECCCCCC--CCCCCCCCCCCC
T ss_conf             5011000000001213342101--00012222--222331002222


No 46 
>>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen synthase two rossman folds, transferase; 1.8A {Pyrococcus abyssi} (A:)
Probab=48.80  E-value=18  Score=16.37  Aligned_cols=87  Identities=15%  Similarity=0.100  Sum_probs=46.0

Q ss_pred             HCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             60378999988761068999997423557521112374202221001233463011122135678999999999864318
Q gi|254780537|r   70 IQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDP  149 (294)
Q Consensus        70 i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP  149 (294)
                      ++.||+++... ..|+|-..+++....+..+|....+.-..-.        ..+.-+..++.+...++++|.+.| +.+|
T Consensus       113 ~~~a~v~v~~s-~~e~~~~~i~Eama~G~Pvi~s~~~~~~e~i--------~~~~g~~~~~~d~~~la~~i~~~l-~~~~  182 (200)
T 2bfw_A          113 YGSVDFVIIPS-YFEPFGLVALEAMCLGAIPIASAVGGLRDII--------TNETGILVKAGDPGELANAILKAL-ELSR  182 (200)
T ss_dssp             HTTCSEEEECC-SCCSSCHHHHHHHHTTCEEEEESCHHHHHHC--------CTTTCEEECTTCHHHHHHHHHHHH-HCCH
T ss_pred             CCCCCCCCCCC-CCCCCCCCCHHHHHCCCEEEECCCCCCHHHC--------CCCCEEEECCCCHHHHHHHHHHHH-HCCH
T ss_conf             22323333322-2222332201233148504642787525440--------687225658999999999999999-5799


Q ss_pred             HHHHHHHHHHHHHHCCH
Q ss_conf             88999999899863014
Q gi|254780537|r  150 SNAKKYELNAREYSEKI  166 (294)
Q Consensus       150 ~~~~~y~~N~~~~~~~l  166 (294)
                      +....+.+|+.++.++.
T Consensus       183 ~~~~~~~~~~~~~~~~~  199 (200)
T 2bfw_A          183 SDLSKFRENCKKRAMSF  199 (200)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99999999999999847


No 47 
>>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii} (A:108-202)
Probab=46.94  E-value=19  Score=16.18  Aligned_cols=65  Identities=5%  Similarity=-0.004  Sum_probs=44.8

Q ss_pred             HHHHHCCCEEEEECCCCCC--CC---CCHHHHHHHHHHH--CCCCCEEEEEE--CCCCHHHHHHHHHHHCCCEE
Q ss_conf             4577529728872268864--00---0789999999762--01697189982--78997999999998299344
Q gi|254780537|r  196 YLAEDFGFKSLYLWPINSD--SE---RSPSMMRHAINQM--RSHKIKFIFSE--STNSDQPAKQVAYETNASYG  260 (294)
Q Consensus       196 Y~~~~yGl~~~~~~~~~~~--~e---ps~~~l~~~~~~i--k~~~v~~if~e--~~~~~~~~~~ia~e~~~~~~  260 (294)
                      -|.+.-|+++....++.-.  .+   .++.++.+....+  ...++..||..  ....-..++.+-+++|.|+.
T Consensus        20 ~~~~~~G~eV~~~~~lg~~~~~~ia~i~~~~i~~~~~~~~~d~p~adAi~isCTnl~t~~~i~~lE~~lg~PVi   93 (95)
T 2dgd_A           20 EWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDXPVV   93 (95)
T ss_dssp             HHHHTTTCEEEEEEECCCCSHHHHHTCCHHHHHHHHHTTHHHHTTSSEEEECCTTSCCTTHHHHHHHHHTSCEE
T ss_pred             HHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
T ss_conf             99996790585300247565421023999999999998540134687899941586478999999999898999


No 48 
>>1aw2_A Triosephosphate isomerase; psychrophilic; 2.65A {Vibrio marinus} (A:)
Probab=46.15  E-value=19  Score=16.10  Aligned_cols=83  Identities=8%  Similarity=0.051  Sum_probs=53.9

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC----------CCCEEEEEECCCCHHHHHHHH
Q ss_conf             4736998266521457752972887226886400078999999976201----------697189982789979999999
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS----------HKIKFIFSESTNSDQPAKQVA  252 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~----------~~v~~if~e~~~~~~~~~~ia  252 (294)
                      .++.++.|.|.|               .+..+..+++.++.++...|++          .+++ |++....++.-...+.
T Consensus       161 ~~~~iIAYEPvw---------------aIGtg~~a~~~~i~~v~~~Ir~~l~~~~~~~~~~v~-ilYGGsV~~~n~~~l~  224 (256)
T 1aw2_A          161 LEGAIIAYEPIW---------------AIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVV-IQYGGSVKPENAAAYF  224 (256)
T ss_dssp             GTTCEEEECCTT---------------TTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCE-EEECSCCCTTTHHHHT
T ss_pred             CCCCEEEECCHH---------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE-EEECCCCCHHHHHHHH
T ss_conf             355457765400---------------146776665044567899998887641102367600-8960685885999995


Q ss_pred             HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             98299344432012378777886899999999999
Q gi|254780537|r  253 YETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLT  287 (294)
Q Consensus       253 ~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~  287 (294)
                      ...++.-. + -    |...-..+++.++++.-.+
T Consensus       225 ~~~~iDGv-L-v----G~asl~~~~f~~ii~~~~~  253 (256)
T 1aw2_A          225 AQPDIDGA-L-V----GGAALDAKSFAAIAKAAAE  253 (256)
T ss_dssp             TSTTCCEE-E-E----SGGGGCHHHHHHHHHHHHH
T ss_pred             CCCCCCEE-E-E----CHHHCCHHHHHHHHHHHHH
T ss_conf             67898869-9-5----3676698999999999997


No 49 
>>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} (A:205-389,A:582-616)
Probab=46.10  E-value=19  Score=16.10  Aligned_cols=85  Identities=7%  Similarity=0.155  Sum_probs=47.2

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEE---EEECCCCCCCCC------CCCHHHHHHHCCCCEEEEECCC
Q ss_conf             35882899975--------289999998518914899---962688980120------2271245776037899998876
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVT---TLVEAGNDSHSY------QVTSADAIKIQNADLILCNGLH   82 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~---~li~~g~dpH~y------e~tp~d~~~i~~Adliv~~G~~   82 (294)
                      .+++|.|++--        ..+..+++.++-..+...   .++| ..+|+.+      -.++.....+++||+|+..|..
T Consensus        21 ~AkrPvIi~G~g~~~~~a~~~l~~Lae~lgiPV~~t~~~kg~~~-~~hP~~~G~~~g~~~~~~~~~~l~~aDlIL~iG~~   99 (220)
T 2pan_A           21 QAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLXGWGCIP-DDHELXAGXVGLQTAHRYGNATLLASDXVFGIGNR   99 (220)
T ss_dssp             TCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTTTTTSSC-TTSTTBCCCCSSSSCCHHHHHHHHHCSEEEEESCC
T ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCC
T ss_conf             38982899777501130899999999720787323435567532-33323232234544422344303433113441445


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             10689999974235575211123
Q gi|254780537|r   83 LEETYMKYFTNLKKGTKIITVTD  105 (294)
Q Consensus        83 ~E~~~~~~~~~~~~~~~~i~~~~  105 (294)
                      +-.+............++|.+..
T Consensus       100 l~~~~t~~~~~~~~~~~iI~I~~  122 (220)
T 2pan_A          100 FANRHTGSVEKYTEGRKIVHIDI  122 (220)
T ss_dssp             CCHHHHSSHHHHHTTCEEEEEES
T ss_pred             CCCCCCCCCCCCCCCCEEEEEEC
T ss_conf             55434322123588981899978


No 50 
>>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding; HET: ADP; 2.30A {Agrobacterium tumefaciens} (A:260-459)
Probab=44.96  E-value=11  Score=17.88  Aligned_cols=31  Identities=6%  Similarity=0.136  Sum_probs=22.1

Q ss_pred             EECCCCCCCCCCCCHHHHHHH------CCC--CEEEEEC
Q ss_conf             626889801202271245776------037--8999988
Q gi|254780537|r   50 LVEAGNDSHSYQVTSADAIKI------QNA--DLILCNG   80 (294)
Q Consensus        50 li~~g~dpH~ye~tp~d~~~i------~~A--dliv~~G   80 (294)
                      ++|+|.|...|.|.+.+.+.+      ...  -++++.|
T Consensus         1 VIpngvD~~~f~~~~~~~~~~~~~~~~~~~~~~~i~~~G   39 (200)
T 1rzu_A            1 LIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVIS   39 (200)
T ss_dssp             TSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEES
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
T ss_conf             344331034556654436665320244567972899925


No 51 
>>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} (A:199-372)
Probab=44.50  E-value=21  Score=15.94  Aligned_cols=82  Identities=18%  Similarity=0.306  Sum_probs=44.5

Q ss_pred             CCCCEEEEEC------HHHHHHHHHHCCCEEEEEEEECCC----CCCCCC-----CCCHHHHHHHCCCCEEEEECCCCCH
Q ss_conf             5882899975------289999998518914899962688----980120-----2271245776037899998876106
Q gi|254780537|r   21 TQKKVVLSSF------SIIGDITQNIAKDLVTVTTLVEAG----NDSHSY-----QVTSADAIKIQNADLILCNGLHLEE   85 (294)
Q Consensus        21 ~~~~~Vv~s~------~pl~~iv~~I~gd~v~V~~li~~g----~dpH~y-----e~tp~d~~~i~~Adliv~~G~~~E~   85 (294)
                      +++|.+++--      .-+..+++.++-..  ++.....|    .+|+..     --++.-...+.+||+++..|..+-.
T Consensus        16 AkrPvii~G~g~~~a~~~l~~lae~~~~pv--~~t~~~kg~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlil~iG~~~~~   93 (174)
T 1ybh_A           16 SKKPVLYVGGGCLNSSDELGRFVELTGIPV--ASTLMGLGSYPXDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDD   93 (174)
T ss_dssp             CSSEEEEECGGGTTCHHHHHHHHHHHCCCE--EECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCH
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHCCCE--EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCC
T ss_conf             799199989862451999999999869899--987424766684001320025776879998652128999996986520


Q ss_pred             HHHHHHHHCCCCCCCCCCC
Q ss_conf             8999997423557521112
Q gi|254780537|r   86 TYMKYFTNLKKGTKIITVT  104 (294)
Q Consensus        86 ~~~~~~~~~~~~~~~i~~~  104 (294)
                      +.........++.++|.+.
T Consensus        94 ~~~~~~~~~~~~~~~I~i~  112 (174)
T 1ybh_A           94 RVTGKLEAFASRAKIVHID  112 (174)
T ss_dssp             HHHSSGGGTTTTSEEEEEE
T ss_pred             CCCCCCCCCCCCCEEEEEE
T ss_conf             1345322346787189995


No 52 
>>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, termination module, phosphopantetheine; 2.6A {Bacillus subtilis} (A:492-598)
Probab=44.38  E-value=20  Score=16.06  Aligned_cols=81  Identities=10%  Similarity=0.088  Sum_probs=45.6

Q ss_pred             HHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEEC--CCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             8630145533789988630784473699826652145775297288722--68864000789999999762016971899
Q gi|254780537|r  161 EYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLW--PINSDSERSPSMMRHAINQMRSHKIKFIF  238 (294)
Q Consensus       161 ~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~--~~~~~~eps~~~l~~~~~~ik~~~v~~if  238 (294)
                      ++..+...+-..++..  .+..+++..+-.++...|+.-.+|.-..+..  .+++  .-++.++.   ..++..+.++||
T Consensus         3 el~~~~~~~a~~L~~~--gi~~g~~V~i~~~n~~~~~~~~~a~~~~G~~~vpl~~--~~~~~~l~---~~~~~~~~~~i~   75 (107)
T 2vsq_A            3 ELDEEANRIARRLQKH--GAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDP--KLPEDRIS---YMLADSAAACLL   75 (107)
T ss_dssp             HHHHHHHHHHHHHHHT--TCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCT--TSCHHHHH---HHHHHHTCCEEE
T ss_pred             HHHHHHHHHHHHCCCC--CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEECCCCC--CCCHHHHH---HHHHHCCCCEEE
T ss_conf             7479988664000014--8765338999623526799999976226802024687--76689999---999844776364


Q ss_pred             EECCCCHHHH
Q ss_conf             8278997999
Q gi|254780537|r  239 SESTNSDQPA  248 (294)
Q Consensus       239 ~e~~~~~~~~  248 (294)
                      +++..-++..
T Consensus        76 ~~~~~~~~~~   85 (107)
T 2vsq_A           76 THQEMKEQAA   85 (107)
T ss_dssp             ECSTTCTTST
T ss_pred             CCHHHHHCCC
T ss_conf             1355531123


No 53 
>>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 2.06A {Thermotoga maritima} (A:28-147)
Probab=43.67  E-value=21  Score=15.85  Aligned_cols=71  Identities=14%  Similarity=0.030  Sum_probs=52.0

Q ss_pred             CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC--------CCCHHHHHHHHHHH
Q ss_conf             7369982665214577529728872268864000789999999762016971899827--------89979999999982
Q gi|254780537|r  184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSES--------TNSDQPAKQVAYET  255 (294)
Q Consensus       184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~--------~~~~~~~~~ia~e~  255 (294)
                      +-.++++.....||.+..|+.+..+.....+.+|      ++.+.|+++.+..|+.=+        ..+...++..|-+.
T Consensus        28 G~~l~AT~gTa~~L~~~~gi~v~~v~~~~~~~~~------~i~~~i~~g~i~~VIn~~~~~~~~~~~~dg~~iRR~Av~~  101 (120)
T 1vmd_A           28 KHELYATGTTGALLQEKLGLKVHRLKSGPLGGDQ------QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVY  101 (120)
T ss_dssp             TSEEEECHHHHHHHHHHHCCCCEECSCGGGTHHH------HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHT
T ss_pred             CCEEEECCCHHHHHHHHCCCEEEEEECCCCCCCC------CHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             9759971019999986029648998558776667------8999997699778997777766775654099999999983


Q ss_pred             CCCEE
Q ss_conf             99344
Q gi|254780537|r  256 NASYG  260 (294)
Q Consensus       256 ~~~~~  260 (294)
                      |++..
T Consensus       102 ~ipl~  106 (120)
T 1vmd_A          102 NIPVA  106 (120)
T ss_dssp             TCCEE
T ss_pred             CCCEE
T ss_conf             98777


No 54 
>>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} (A:)
Probab=43.45  E-value=18  Score=16.30  Aligned_cols=21  Identities=5%  Similarity=0.078  Sum_probs=11.6

Q ss_pred             HHHHHHHHHHHCCCCCEEEEE
Q ss_conf             899999997620169718998
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKFIFS  239 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~if~  239 (294)
                      .+.+..+.+.+++.++..|..
T Consensus        37 ~~~~~~l~~li~~~~v~~iVv   57 (98)
T 1iv0_A           37 EEDVEALLDFVRREGLGKLVV   57 (98)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCEEE
T ss_conf             589999999998736250781


No 55 
>>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide mutase); acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} (A:)
Probab=43.03  E-value=22  Score=15.79  Aligned_cols=31  Identities=6%  Similarity=0.063  Sum_probs=15.8

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             037899998876106899999742355752111
Q gi|254780537|r   71 QNADLILCNGLHLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        71 ~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      +++++||.. .|++..+.-.+... -..++|.+
T Consensus        75 ~~~~viIa~-AG~~a~L~gvva~~-t~~PVIgv  105 (182)
T 1u11_A           75 RGLNVIIAG-AGGAAHLPGMCAAW-TRLPVLGV  105 (182)
T ss_dssp             TTCCEEEEE-EESSCCHHHHHHHH-CSSCEEEE
T ss_pred             CCCEEEEEE-ECCCCCCCCCEEEE-CCCEEEEE
T ss_conf             697489986-15888776613431-36527997


No 56 
>>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* (A:175-354)
Probab=42.26  E-value=22  Score=15.71  Aligned_cols=76  Identities=14%  Similarity=0.148  Sum_probs=41.2

Q ss_pred             CCCCEEEEECH------HHHHHHHHHCCCEEEEEEEECCC----CCCCC-----CCCCHHHHHHHCCCCEEEEECCCCCH
Q ss_conf             58828999752------89999998518914899962688----98012-----02271245776037899998876106
Q gi|254780537|r   21 TQKKVVLSSFS------IIGDITQNIAKDLVTVTTLVEAG----NDSHS-----YQVTSADAIKIQNADLILCNGLHLEE   85 (294)
Q Consensus        21 ~~~~~Vv~s~~------pl~~iv~~I~gd~v~V~~li~~g----~dpH~-----ye~tp~d~~~i~~Adliv~~G~~~E~   85 (294)
                      +.+|.|++--.      -+..|++..+-..+  .+....|    .+|+.     +--++.-...|.+||+++..|..+-.
T Consensus        27 Ak~Pvii~G~g~~~a~~~l~~lae~~~~Pv~--~t~~~kg~~~~~~p~~~G~~g~~~~~~~~~~l~~aDlil~iG~~~~~  104 (180)
T 3eya_A           27 SSNIALMCGSGCAGAHKELVEFAGKIKAPIV--HALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPY  104 (180)
T ss_dssp             CCSEEEEECGGGTTCHHHHHHHHHHHTCCEE--ECGGGHHHHSSSCTTBCCCCSTTSCHHHHHHHHHCSEEEEESCCCCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCEEEEEEECCC
T ss_conf             4650899446543048999986764148743--23443323456776321223333331001102124423798640365


Q ss_pred             HHHHHHHHCCCCCCCCCC
Q ss_conf             899999742355752111
Q gi|254780537|r   86 TYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        86 ~~~~~~~~~~~~~~~i~~  103 (294)
                      +.     ....+.+++.+
T Consensus       105 ~~-----~~~~~~~~i~i  117 (180)
T 3eya_A          105 RA-----FYPTDAKIIQI  117 (180)
T ss_dssp             GG-----GSCSSSEEEEE
T ss_pred             CC-----CCCCCCCEEEE
T ss_conf             45-----56776718999


No 57 
>>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, thiamin thiazolone diphosphate, inhibitor; HET: TZD; 1.00A {Pseudomonas putida} (A:174-341)
Probab=42.22  E-value=22  Score=15.71  Aligned_cols=65  Identities=6%  Similarity=-0.016  Sum_probs=35.2

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECCCC----CCCC-----CCCCHHHHHHHCCCCEEEEECCC
Q ss_conf             35882899975--------2899999985189148999626889----8012-----02271245776037899998876
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEAGN----DSHS-----YQVTSADAIKIQNADLILCNGLH   82 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~g~----dpH~-----ye~tp~d~~~i~~Adliv~~G~~   82 (294)
                      .+++|.|++--        .-+..+++..+-..+  +.....|.    +|+.     +--++.-...+.+||+++..|..
T Consensus        26 ~AkrPvii~G~~~~~~~a~~~l~~la~~~~~pv~--~t~~~~g~~~~~~~~~~g~~g~~~~~~~~~~~~~aDlil~vG~~  103 (168)
T 1q6z_A           26 SASNPAIVLGPDVDAANANADCVMLAERLKAPVW--VAPSAPRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIGAP  103 (168)
T ss_dssp             HCSSCEEEECHHHHHTTCHHHHHHHHHHHTCCEE--ECSSCSBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEESSC
T ss_pred             HCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCE--EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCC
T ss_conf             3758736614543012667678999997358702--20234555577778433465223548999998546620232453


Q ss_pred             CCHH
Q ss_conf             1068
Q gi|254780537|r   83 LEET   86 (294)
Q Consensus        83 ~E~~   86 (294)
                      +..+
T Consensus       104 ~~~~  107 (168)
T 1q6z_A          104 VFRY  107 (168)
T ss_dssp             TTCC
T ss_pred             CCCC
T ss_conf             3332


No 58 
>>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} (A:58-170)
Probab=42.06  E-value=22  Score=15.74  Aligned_cols=78  Identities=14%  Similarity=0.094  Sum_probs=43.2

Q ss_pred             HHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEE--CCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             863014553378998863078447369982665214577529728872--268864000789999999762016971899
Q gi|254780537|r  161 EYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYL--WPINSDSERSPSMMRHAINQMRSHKIKFIF  238 (294)
Q Consensus       161 ~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~--~~~~~~~eps~~~l~~~~~~ik~~~v~~if  238 (294)
                      ++.++...+-..++...  + ++++..+..++...++.-.||.-..+.  ..+++  ..++.++..++   +..+.++||
T Consensus         3 el~~~~~~ia~~L~~~g--~-~gd~V~i~~~n~~~~~~~~~A~~~~G~~~vpi~~--~~~~~~l~~~l---~~~~~~~ii   74 (113)
T 3ite_A            3 KLNETANQVANLIIHAS--L-HGRAIAVSLDRSLIAFAIIVGIXKSGNTYVPIEA--GLPNDRKSFLL---RDSRAAXAF   74 (113)
T ss_dssp             HHHHHHHHHHHHHHHTT--C-SSCEEEEECCSCHHHHHHHHHHHHTTCEEEECCT--TSCHHHHHHHH---HHHTCSEEE
T ss_pred             HHHHHHHHHHHHHHHCC--C-CCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECC--CCCHHHHHHHH---HHCCCCEEE
T ss_conf             99999999999999779--9-9698999938989999999999996979998688--89999999998---624887999


Q ss_pred             EECCCCHH
Q ss_conf             82789979
Q gi|254780537|r  239 SESTNSDQ  246 (294)
Q Consensus       239 ~e~~~~~~  246 (294)
                      ++...-++
T Consensus        75 ~~~~~~~~   82 (113)
T 3ite_A           75 VCDNNFDG   82 (113)
T ss_dssp             ECTTTTTT
T ss_pred             EECHHHHH
T ss_conf             96003221


No 59 
>>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} (A:187-356)
Probab=41.65  E-value=22  Score=15.67  Aligned_cols=83  Identities=14%  Similarity=0.179  Sum_probs=46.6

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECC----CCCCCCCC----------CCHHHHHHHCCCCEEE
Q ss_conf             35882899975--------28999999851891489996268----89801202----------2712457760378999
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEA----GNDSHSYQ----------VTSADAIKIQNADLIL   77 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~----g~dpH~ye----------~tp~d~~~i~~Adliv   77 (294)
                      .+++|.|++--        ..+..+++..+-..  +++....    ..+|+..-          -++.-.+.+.+||+++
T Consensus        29 ~A~rPvii~G~~~~~~~a~~~l~~lae~~~~pv--~~t~~~kg~~~~~~p~~~G~~~~~~~G~~~~~~~~~~l~~aDlil  106 (170)
T 2iht_A           29 EAKHPVLVVGAAAIRSGAVPAIRALAERLNIPV--ITTYIAKGVLPVGHELNYGAVTGYXDGILNFPALQTXFAPVDLVL  106 (170)
T ss_dssp             HCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCE--EECSTTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEE
T ss_pred             HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE--EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEE
T ss_conf             564652013212234323799999999979898--973146654357852455443330113322478998734434300


Q ss_pred             EECCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             988761068999997423557521112
Q gi|254780537|r   78 CNGLHLEETYMKYFTNLKKGTKIITVT  104 (294)
Q Consensus        78 ~~G~~~E~~~~~~~~~~~~~~~~i~~~  104 (294)
                      ..|..+..+..-......++.++|.+.
T Consensus       107 ~iG~~~~~~~~~~~~~~~~~~~~i~i~  133 (170)
T 2iht_A          107 TVGYDYAEDLRPSXWQKGIEKKTVRIS  133 (170)
T ss_dssp             EETCCGGGCCCHHHHCCSSCCEEEEEE
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             002453124665422245532100012


No 60 
>>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} (A:)
Probab=41.01  E-value=23  Score=15.58  Aligned_cols=30  Identities=10%  Similarity=0.052  Sum_probs=15.4

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             37899998876106899999742355752111
Q gi|254780537|r   72 NADLILCNGLHLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        72 ~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      ..++||.. .|++..+.-++... -..++|.+
T Consensus        66 ~~~viIa~-AG~~a~Lpgvva~~-t~~PVIgv   95 (170)
T 1xmp_A           66 GLKVIIAG-AGGAAHLPGMVAAK-TNLPVIGV   95 (170)
T ss_dssp             TCCEEEEE-EESSCCHHHHHHTT-CCSCEEEE
T ss_pred             CCCEEEEE-CCCCCCCCHHHHHH-CCCEEEEE
T ss_conf             66279986-15767762277774-55026777


No 61 
>>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, cytoplasm, gluconeogenesis, glycolysis, pentose shunt, structural genomics; 1.60A {Bartonella henselae} (A:)
Probab=40.63  E-value=23  Score=15.55  Aligned_cols=77  Identities=6%  Similarity=0.054  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC----------CCCEEE
Q ss_conf             5337899886307844736998266521457752972887226886400078999999976201----------697189
Q gi|254780537|r  168 NSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS----------HKIKFI  237 (294)
Q Consensus       168 ~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~----------~~v~~i  237 (294)
                      .+....+..+...+..++.+++|.|.|.               +..+.-+++.++.+..+.|++          .++++ 
T Consensus       167 ~~~~q~~~~~~~~~~~~~~viAyEP~wa---------------IGtg~~a~~~~~~~~~~~Ir~~~~~~~~~~~~~v~I-  230 (275)
T 3kxq_A          167 VLTRQLEGSLPDGATAENIIIAYEPVWA---------------VGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRL-  230 (275)
T ss_dssp             HHHHHHHHHSCTTCCTTTEEEEECCCC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCE-
T ss_pred             HHHHHHHHHCCCCCCCCCEEEEECCEEC---------------CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE-
T ss_conf             9999999760466421004897466441---------------268999982999999999999999870212478208-


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEE
Q ss_conf             98278997999999998299344
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYG  260 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~  260 (294)
                      ++....+......++.+.++.-+
T Consensus       231 lyGGsV~~~n~~~l~~~~gvDGv  253 (275)
T 3kxq_A          231 LYGGSVKPSNAFELLSTAHVNGA  253 (275)
T ss_dssp             EECSCCCTTTHHHHHTSTTCCEE
T ss_pred             EEECCCCHHHHHHHHCCCCCCEE
T ss_conf             97178998699999567798979


No 62 
>>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (B:310-418)
Probab=40.36  E-value=24  Score=15.52  Aligned_cols=74  Identities=12%  Similarity=0.121  Sum_probs=42.5

Q ss_pred             CCEEEEECCC----CHHHHHHCCCEEEEECCCCCCC----------------C---CCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             7369982665----2145775297288722688640----------------0---078999999976201697189982
Q gi|254780537|r  184 KRWFVTSEGC----LVYLAEDFGFKSLYLWPINSDS----------------E---RSPSMMRHAINQMRSHKIKFIFSE  240 (294)
Q Consensus       184 ~~~~v~~H~a----f~Y~~~~yGl~~~~~~~~~~~~----------------e---ps~~~l~~~~~~ik~~~v~~if~e  240 (294)
                      +|.++...+.    +.-|.++.|++++.+...++..                +   .--.+..++.+.+++.++..++..
T Consensus         4 Krv~i~gd~~~~~~l~~~l~ElGm~vv~~~~~~~~~~~~~~~~~~l~~~~~~~~~vv~~~d~~el~~~i~~~~pDliig~   83 (109)
T 1mio_B            4 KKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEGVDLLISN   83 (109)
T ss_dssp             CEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSCCSEEEES
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEC
T ss_conf             87999888188999999999849901488726897777899999998658988789979999999999974499999979


Q ss_pred             CCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             7899799999999829934443
Q gi|254780537|r  241 STNSDQPAKQVAYETNASYGGV  262 (294)
Q Consensus       241 ~~~~~~~~~~ia~e~~~~~~~~  262 (294)
                           ..-+.+|+.+|++...+
T Consensus        84 -----s~~~~~a~klgiP~i~i  100 (109)
T 1mio_B           84 -----TYGKFIAREENIPFVRF  100 (109)
T ss_dssp             -----GGGHHHHHHHTCCEEEC
T ss_pred             -----CHHHHHHHHCCCCEEEE
T ss_conf             -----45899999829998984


No 63 
>>2dp3_A Triosephosphate isomerase; enzyme, alpha/beta barrel; 2.10A {Giardia intestinalis} (A:)
Probab=40.14  E-value=24  Score=15.50  Aligned_cols=79  Identities=14%  Similarity=0.183  Sum_probs=52.8

Q ss_pred             CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEEEECCCCHHHHHHH
Q ss_conf             47369982665214577529728872268864000789999999762016-----------9718998278997999999
Q gi|254780537|r  183 EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIFSESTNSDQPAKQV  251 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~i  251 (294)
                      .++.+|+|.|.|               .+..+..+|+.++.++..+|++.           +++.+ +-...++.-+..+
T Consensus       162 ~~~~iIAYEPvw---------------AIGtg~~as~e~i~~v~~~Ir~~l~~~~~~~~~~~v~IL-YGGSV~~~n~~~l  225 (257)
T 2dp3_A          162 WKEVVIAYEPVW---------------SIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRII-YGGSANGSNCEKL  225 (257)
T ss_dssp             GGGEEEEECCGG---------------GTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEE-EESSCCTTTHHHH
T ss_pred             CCCEEEEECCCC---------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCHHHHHHH
T ss_conf             564799965500---------------135554456133333578999999988777553865489-6088898999998


Q ss_pred             HHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             998299344432012378777886899999999
Q gi|254780537|r  252 AYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF  284 (294)
Q Consensus       252 a~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~  284 (294)
                      +...++.-. ++-.-+|      ...++++++.
T Consensus       226 ~~~~~vDG~-LvG~asl------~~ef~~ii~~  251 (257)
T 2dp3_A          226 GQCPNIDGF-LVGGASL------KPEFMTMIDI  251 (257)
T ss_dssp             HTSTTCCEE-EESGGGG------STHHHHHHHH
T ss_pred             HCCCCCCEE-EEEHHHC------CHHHHHHHHH
T ss_conf             578899979-9510546------9668999999


No 64 
>>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA; 1.35A {Pyrococcus horikoshii OT3} PDB: 2dec_A* 2df8_A 2cb0_A* (A:12-157)
Probab=39.97  E-value=21  Score=15.82  Aligned_cols=86  Identities=10%  Similarity=0.002  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECCCCH-------HHHHHCCCEEEEECCCCCCCCCCHHH-HHHHHHHHCCCCCEEE
Q ss_conf             455337899886307844736998266521-------45775297288722688640007899-9999976201697189
Q gi|254780537|r  166 IRNSILPLKTRIEKVDPEKRWFVTSEGCLV-------YLAEDFGFKSLYLWPINSDSERSPSM-MRHAINQMRSHKIKFI  237 (294)
Q Consensus       166 l~~l~~~~~~~~~~~p~~~~~~v~~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~-l~~~~~~ik~~~v~~i  237 (294)
                      +.++++.++.....+...+|.++..-..-.       |+..++|.....+..        +.. .......+.++.+-++
T Consensus         3 ~~~i~~~i~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~--------~~~~~~~~~~~~~~~dvvi~   74 (146)
T 2e5f_A            3 IIKADKVFNKVKDKISLPNRILYLGCGSSHFLSKLLAMVTNMHGGLGIALPC--------SEFLYSKETYPIGEVELAVG   74 (146)
T ss_dssp             HHHHHHHHHHHTTTCCCCSEEEEEESTHHHHHHHHHHHHHHHTTSEEEEEEH--------HHHHHHGGGSCCCSCSEEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEC--------HHHHHCCCCCCCCCCEEEEE
T ss_conf             9999999999999856799699998836999999999999996399989967--------88773276676899828999


Q ss_pred             EEECCCCHHHHHHHHHHHCCCEE
Q ss_conf             98278997999999998299344
Q gi|254780537|r  238 FSESTNSDQPAKQVAYETNASYG  260 (294)
Q Consensus       238 f~e~~~~~~~~~~ia~e~~~~~~  260 (294)
                      +.-+..++...+.+ +..+.++.
T Consensus        75 iS~sG~t~~~~~~~-~~a~~~i~   96 (146)
T 2e5f_A           75 ISRSGETTEILLAL-EKINVKKL   96 (146)
T ss_dssp             ECSSSCCHHHHHHH-HTCCSCEE
T ss_pred             ECCCCCCHHHHHHH-HHHHHHHC
T ss_conf             77899826799999-98555311


No 65 
>>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} (A:)
Probab=39.53  E-value=24  Score=15.43  Aligned_cols=39  Identities=23%  Similarity=0.366  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             356789999999998643188899999989986301455
Q gi|254780537|r  130 LTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRN  168 (294)
Q Consensus       130 p~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~  168 (294)
                      -...+.+...|.+.|.+..|+.-+.|.+|+..+.+.+..
T Consensus        85 ~~yiK~YmK~i~~~L~e~~perv~~Fk~~a~~~vK~il~  123 (168)
T 1h6q_A           85 MSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILA  123 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHH
T ss_conf             999999999999998662953278145271889999986


No 66 
>>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} (A:1-120)
Probab=39.50  E-value=24  Score=15.43  Aligned_cols=22  Identities=14%  Similarity=0.197  Sum_probs=16.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3011122135678999999999
Q gi|254780537|r  122 PNPHAWMSLTNAMIYIENIRKA  143 (294)
Q Consensus       122 ~dpH~Wldp~~~~~~a~~I~~~  143 (294)
                      .+|.+|-||..+..+.+..+.-
T Consensus        42 ~~p~fw~d~~~a~~i~ke~~~L   63 (120)
T 1gqe_A           42 EQPDVWNEPERAQALGKERSSL   63 (120)
T ss_dssp             HSGGGGGSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHCHHHHHHHHHHHHHH
T ss_conf             0972454999999999999999


No 67 
>>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} (A:157-272,A:309-408)
Probab=39.14  E-value=25  Score=15.39  Aligned_cols=152  Identities=9%  Similarity=0.101  Sum_probs=77.0

Q ss_pred             HHHHHHHCCCCEEEEECCCCCH----HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             1245776037899998876106----899999742355752111237420222100123346301112213567899999
Q gi|254780537|r   64 SADAIKIQNADLILCNGLHLEE----TYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIEN  139 (294)
Q Consensus        64 p~d~~~i~~Adliv~~G~~~E~----~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~  139 (294)
                      +.....+.+||++|..|.+...    -+..+.+...++.++|.+.........        ..|-|+=.-|-.-..++..
T Consensus        20 ~~~~~D~~~a~~ii~~G~n~~~s~p~~~~~~~~a~~~GakvivVdPr~~~ta~--------~AD~wi~irPGtD~al~~a   91 (216)
T 1h0h_A           20 TNHWIDLKNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPRYTRTST--------KCDLYAPLRSGSDIAFLNG   91 (216)
T ss_dssp             SSCTGGGGGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSSCCTTGG--------GCSEEECCCTTCHHHHHHH
T ss_pred             CCCHHHHHHCCEEEEECCCHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCHHH--------HHCCCCCCCCCCCHHHHHH
T ss_conf             89988997498999989996797979999999998769806897334350777--------5163457689964777631


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH---CCCEEEEECCCCCCCC
Q ss_conf             9999864318889999998998630145533789988630784473699826652145775---2972887226886400
Q gi|254780537|r  140 IRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAED---FGFKSLYLWPINSDSE  216 (294)
Q Consensus       140 I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~---yGl~~~~~~~~~~~~e  216 (294)
                      +...+.+.+--.+++.++..                ...-+|.....+--.+-+|+-|.+.   |.++.+     ..-..
T Consensus        92 l~~~ii~~~~~d~~fv~~~t----------------~~~~l~~~d~~~~~~~~vf~~~~~~~~~yt~e~~-----~~itG  150 (216)
T 1h0h_A           92 MTKYILEKELYFKDYVVNYT----------------NASFIPKRDETLKHPRCVFQIMKKHYERYDLDKI-----SAICG  150 (216)
T ss_dssp             HHHHHHHTTCSCHHHHHHHB----------------GGGBBBCBCTTSCSTTBHHHHHHHHHTTCCHHHH-----HHHHC
T ss_pred             HHHHHHHCCCCCHHHHHHHC----------------CCCHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHH-----HHHHC
T ss_conf             24367755871589999864----------------7511144333322223289999998762899999-----87608


Q ss_pred             CCHHHHHHHHHHHCCCC----CEEEEEECCCC
Q ss_conf             07899999997620169----71899827899
Q gi|254780537|r  217 RSPSMMRHAINQMRSHK----IKFIFSESTNS  244 (294)
Q Consensus       217 ps~~~l~~~~~~ik~~~----v~~if~e~~~~  244 (294)
                      .++.+|.++.+.+-+++    -.++++--..+
T Consensus       151 v~~~~i~~lA~~~a~~~~~~k~~~i~~g~G~~  182 (216)
T 1h0h_A          151 TPKELILKVYDAYCATGKPDKAGTIMYAMGWT  182 (216)
T ss_dssp             CCHHHHHHHHHHHHGGGSTTCCEEEEECCCCS
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             88899999999998635667747998056432


No 68 
>>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* (A:1-351)
Probab=38.96  E-value=25  Score=15.38  Aligned_cols=23  Identities=13%  Similarity=0.134  Sum_probs=13.7

Q ss_pred             CCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             07899999997620169718998
Q gi|254780537|r  217 RSPSMMRHAINQMRSHKIKFIFS  239 (294)
Q Consensus       217 ps~~~l~~~~~~ik~~~v~~if~  239 (294)
                      -|+++|....-.+-..+-.+++.
T Consensus       294 ks~~~li~~l~~~v~~~gnlLLN  316 (351)
T 2wvv_A          294 KTPIEVIDRIVHAVSMGGNMVVN  316 (351)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCHHHHHHHHHHHHCCCCEEEEE
T ss_conf             89999999999973689459996


No 69 
>>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} (A:187-366)
Probab=38.82  E-value=25  Score=15.36  Aligned_cols=112  Identities=12%  Similarity=0.157  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECCC----CCCCCCC------CCHHHHHHHCCCCEEEEECC
Q ss_conf             35882899975--------289999998518914899962688----9801202------27124577603789999887
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEAG----NDSHSYQ------VTSADAIKIQNADLILCNGL   81 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~g----~dpH~ye------~tp~d~~~i~~Adliv~~G~   81 (294)
                      .+++|.|++--        ..+..+++.++-..+  ++....|    .+|+.|-      -++.-...+.+||+++..|.
T Consensus        20 ~A~rPvii~G~~~~~~~a~~~l~~lae~~g~Pv~--~t~~~kg~~~~~hp~~~~g~~g~~~~~~~~~~i~~aD~il~iG~   97 (180)
T 1ozh_A           20 QAKNPIFLLGLMASQPENSKALRRLLETSHIPVT--STYQAAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGY   97 (180)
T ss_dssp             HCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCEE--ECGGGTTTCCTTTCTTEEEECSSBTTCHHHHHHHHCSEEEEESC
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE--ECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCC
T ss_conf             5439864578765451668999999986089711--02323676433455434445676564233124650204666376


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             610689999974235575211123742022210012334630111221356789999999998
Q gi|254780537|r   82 HLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKAL  144 (294)
Q Consensus        82 ~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L  144 (294)
                      .+-.+...  ....+..+++-+...-.      ....+...|-++.-|+..   .++.+.+.|
T Consensus        98 ~~~~~~~~--~~~~~~~~~i~i~~d~~------~~~~~~~~~~~i~~d~~~---~l~~L~~~l  149 (180)
T 1ozh_A           98 SPVEYEPA--MWNSGNATLVHIDVLPA------YEERNYTPDVELVGDIAG---TLNKLAQNI  149 (180)
T ss_dssp             CGGGSCGG--GTCCSCSEEEEEESSCC------CCBTTBCCSEEEESCHHH---HHHHHHHTC
T ss_pred             CCCCCCCC--CCCCCCCEEEEEECCHH------HHCCCCCCCEEEECHHHH---HHHHHHHHH
T ss_conf             55666765--46788761799843355------423577764355213999---999999986


No 70 
>>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} (A:)
Probab=38.34  E-value=25  Score=15.31  Aligned_cols=31  Identities=6%  Similarity=0.322  Sum_probs=12.6

Q ss_pred             CCEEEEECCCCCHH-HHHHHHHCCCCCCCCCC
Q ss_conf             78999988761068-99999742355752111
Q gi|254780537|r   73 ADLILCNGLHLEET-YMKYFTNLKKGTKIITV  103 (294)
Q Consensus        73 Adliv~~G~~~E~~-~~~~~~~~~~~~~~i~~  103 (294)
                      -.++|...+|.++. +..++........++.+
T Consensus        46 ~~v~v~~SGGkDSt~ll~l~~~~~~~~~~~~~   77 (252)
T 2o8v_A           46 GEYVLSSSFGIQAAVSLHLVNQIRPDIPVILT   77 (252)
T ss_dssp             SCEEEECCCSTTHHHHHHHHHHHSTTCEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             98899933877899999999815899508999


No 71 
>>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} (A:)
Probab=37.98  E-value=26  Score=15.28  Aligned_cols=108  Identities=10%  Similarity=-0.114  Sum_probs=57.6

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC-------HHHHHHCCCEEEEEC-C-CCCCC----------
Q ss_conf             9998998630145533789988630784473699826652-------145775297288722-6-88640----------
Q gi|254780537|r  155 YELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCL-------VYLAEDFGFKSLYLW-P-INSDS----------  215 (294)
Q Consensus       155 y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af-------~Y~~~~yGl~~~~~~-~-~~~~~----------  215 (294)
                      ++...+.+...++.+...++.....+-..+|.++.....-       .|....+|.....+. + ..++.          
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rI~~~G~G~S~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (188)
T 1tk9_A           14 HQKIVQASEILKGQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGND   93 (188)
T ss_dssp             HHHHHHHGGGGHHHHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999998871999999999999999859989999168874344331434068765554433222567874433212255


Q ss_pred             -CCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH--HHHHHHCCCEEEE
Q ss_conf             -0078999999976201697189982789979999--9999829934443
Q gi|254780537|r  216 -ERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAK--QVAYETNASYGGV  262 (294)
Q Consensus       216 -eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~--~ia~e~~~~~~~~  262 (294)
                       .-...........++++.+-.+|..+..++...+  ..+++.|++++.+
T Consensus        94 ~~~~~~~~~~~~~~~~~~dlvI~~S~sG~t~~~~~~~~~ak~~g~~vI~I  143 (188)
T 1tk9_A           94 YGFEFVFSRQVEALGNEKDVLIGISTSGKSPNVLEALKKAKELNXLCLGL  143 (188)
T ss_dssp             TCGGGHHHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEEE
T ss_conf             79999999999983799998999818988831576567777424148998


No 72 
>>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} (X:152-335,X:532-565)
Probab=37.92  E-value=26  Score=15.27  Aligned_cols=162  Identities=15%  Similarity=0.110  Sum_probs=90.0

Q ss_pred             HHHHHHHCCCCEEEEECCCCC-H---HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             124577603789999887610-6---899999742355752111237420222100123346301112213567899999
Q gi|254780537|r   64 SADAIKIQNADLILCNGLHLE-E---TYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIEN  139 (294)
Q Consensus        64 p~d~~~i~~Adliv~~G~~~E-~---~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~  139 (294)
                      +.....+.+||+|+..|.+.- .   .+..+.+...++.++|.+.-.-....        ...|-|+=.-|-.-...+..
T Consensus         7 ~~~~~Di~nad~IL~~G~N~~~s~p~~~~~l~~ar~~GakvVvIdPr~t~ta--------~~AD~~l~vrPGtD~al~~a   78 (218)
T 2iv2_X            7 SNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETA--------RIADMHIALKNGSNIALLNA   78 (218)
T ss_dssp             SSCGGGGGGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSCCHHH--------HTCSEEECCCTTCHHHHHHH
T ss_pred             CCCCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCHHH--------HHHHHHCCCCCCCHHHHHHH
T ss_conf             8863211024246867818044111266777899867998999576420578--------88655135566868999976


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCH
Q ss_conf             99998643188899999989986301455337899886307844736998266521457752972887226886400078
Q gi|254780537|r  140 IRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSP  219 (294)
Q Consensus       140 I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~  219 (294)
                      |...+.+.+-.++++..+..    ..+++    ++..+...            ...+.++.              ...++
T Consensus        79 l~~~ii~~g~~d~~fv~~~t----~g~~~----~~~~~~~~------------t~~~~a~~--------------tGv~~  124 (218)
T 2iv2_X           79 MGHVIIEENLYDKAFVASRT----EGFEE----YRKIVEGY------------TPESVEDI--------------TGVSA  124 (218)
T ss_dssp             HHHHHHHTTCSCHHHHHHHE----ECHHH----HHHHHHTC------------CSGGGHHH--------------HCCCH
T ss_pred             HHHHHHHCCCCCHHHHHHCC----CCCCC----HHHHHHHC------------CHHHHHHH--------------CCCCH
T ss_conf             56666766883644565324----67310----02444310------------02456765--------------28748


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCC----CH----HHHHHHHHHHC---CCEEEEEECCC
Q ss_conf             999999976201697189982789----97----99999999829---93444320123
Q gi|254780537|r  220 SMMRHAINQMRSHKIKFIFSESTN----SD----QPAKQVAYETN---ASYGGVLYVDS  267 (294)
Q Consensus       220 ~~l~~~~~~ik~~~v~~if~e~~~----~~----~~~~~ia~e~~---~~~~~~~~~d~  267 (294)
                      .+|.++.+.+.+.+-.+++.....    +.    +.+..|+--+|   .+-.++.++..
T Consensus       125 ~~i~~lA~~~a~a~~~~i~~g~g~~~~~~G~~~~rai~~L~~l~G~igk~GgG~~~~~G  183 (218)
T 2iv2_X          125 SEIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRG  183 (218)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEETTGGGSSSHHHHHHHHHHHHHHTTCSSSTTCSEEEECS
T ss_pred             HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             88888899874035424633641122554208899999999984778987766664445


No 73 
>>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A* (A:117-211)
Probab=37.54  E-value=26  Score=15.23  Aligned_cols=64  Identities=3%  Similarity=-0.105  Sum_probs=44.2

Q ss_pred             HHHHCCCEEEEECCCC--CCC---CCCHHHHHHHHHHHC--CCCCEEEEEE--CCCCHHHHHHHHHHHCCCEE
Q ss_conf             5775297288722688--640---007899999997620--1697189982--78997999999998299344
Q gi|254780537|r  197 LAEDFGFKSLYLWPIN--SDS---ERSPSMMRHAINQMR--SHKIKFIFSE--STNSDQPAKQVAYETNASYG  260 (294)
Q Consensus       197 ~~~~yGl~~~~~~~~~--~~~---eps~~~l~~~~~~ik--~~~v~~if~e--~~~~~~~~~~ia~e~~~~~~  260 (294)
                      |.++.|+++....++.  ...   ..++.++.+....+-  ..++..||..  ....-..++.+.+++|.|++
T Consensus        21 ~~~~~G~eV~~~~~l~~~~~~~ia~i~~~~i~~~~~~~~~d~p~adai~isCTnlrt~~~i~~lE~~lG~PVi   93 (95)
T 3ixl_A           21 FLAEESLVPTGXRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGLLTLDAIPEVERRLGVPVV   93 (95)
T ss_dssp             HHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTSCCTTHHHHHHHHHSSCEE
T ss_pred             HHHHCCCEECCEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
T ss_conf             9998797330311027885265403799999999999974189987899847885378899999999898898


No 74 
>>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} (A:181-349)
Probab=36.00  E-value=28  Score=15.07  Aligned_cols=81  Identities=22%  Similarity=0.329  Sum_probs=42.5

Q ss_pred             CCCCCEEEEECH--------HHHHHHHHHCCCEEEEEE-EECC----CCCCCCCC------CCHHHHHHHCCCCEEEEEC
Q ss_conf             358828999752--------899999985189148999-6268----89801202------2712457760378999988
Q gi|254780537|r   20 TTQKKVVLSSFS--------IIGDITQNIAKDLVTVTT-LVEA----GNDSHSYQ------VTSADAIKIQNADLILCNG   80 (294)
Q Consensus        20 ~~~~~~Vv~s~~--------pl~~iv~~I~gd~v~V~~-li~~----g~dpH~ye------~tp~d~~~i~~Adliv~~G   80 (294)
                      .+++|.|++--.        .+..+++..+-.   |.. ....    ..+|+..-      -++...+.+.+||+++..|
T Consensus        28 ~AkrPvii~G~~~~~~~~~~~l~~lae~~g~p---v~~t~~~kg~~~~~~p~~~G~~~~~~~~~~~~~~l~~aDlvl~~G  104 (169)
T 1ovm_A           28 MSKRTALLADFLVLRHGLKHALQKWVKEVPMA---HATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVG  104 (169)
T ss_dssp             TCSCEEEEECHHHHHTTCHHHHHHHHHHSCCE---EEECGGGTTSSCTTSTTCCCCCCGGGSCHHHHHHHHTSSEEEEES
T ss_pred             HCCCCEEEECCCCCCCCCHHHHHHHHHHCCCC---EEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECC
T ss_conf             55886899576212353369999999866996---122233314126666534676246556599999984144011104


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             76106899999742355752111
Q gi|254780537|r   81 LHLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        81 ~~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      ..+-.+.........+..++|.+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~I~i  127 (169)
T 1ovm_A          105 TRFTDTLTAGFTHQLTPAQTIEV  127 (169)
T ss_dssp             CCCCTTTTTTTCCCCCTTTEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             34564444565445787404674


No 75 
>>1wo8_A Methylglyoxal synthase; structural genomics, riken structural genomics/proteomics initiative, RSGI, lyase; 1.70A {Thermus thermophilus HB8} (A:)
Probab=35.96  E-value=28  Score=15.07  Aligned_cols=72  Identities=7%  Similarity=-0.039  Sum_probs=50.9

Q ss_pred             CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC--C---C---HHHHHHHHHHH
Q ss_conf             73699826652145775297288722688640007899999997620169718998278--9---9---79999999982
Q gi|254780537|r  184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSEST--N---S---DQPAKQVAYET  255 (294)
Q Consensus       184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~--~---~---~~~~~~ia~e~  255 (294)
                      +-.++++.....||.+.+|++...+.....+.++      ++.+.|++++|..|+.=+.  .   .   ...++..|-+.
T Consensus        29 G~~i~aT~gTa~~L~~~~Gi~~~~v~k~~~~~~~------~i~~~i~~g~i~~VIn~~~~~~~~~~~~dg~~iRR~ai~~  102 (126)
T 1wo8_A           29 RYPLLATGTTGARIQEATGLAVERVLSGPLGGDL------QIGARVAEGKVLAVVFLQDPLTAKPHEPDVQALMRVCNVH  102 (126)
T ss_dssp             TSCEEECHHHHHHHHHHHCCCCEECCCTTTTHHH------HHHHHHHTTCEEEEEEECCTTSCCTTHHHHHHHHHHHHHT
T ss_pred             CEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCC------CHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             7689953348999998359568999417889999------9899998498209998169998764521089999999971


Q ss_pred             CCCEEE
Q ss_conf             993444
Q gi|254780537|r  256 NASYGG  261 (294)
Q Consensus       256 ~~~~~~  261 (294)
                      |++...
T Consensus       103 ~Vpl~T  108 (126)
T 1wo8_A          103 GVPLAT  108 (126)
T ss_dssp             TCCEEC
T ss_pred             CCCEEE
T ss_conf             989894


No 76 
>>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} (A:12-131)
Probab=35.92  E-value=28  Score=15.06  Aligned_cols=71  Identities=8%  Similarity=-0.014  Sum_probs=50.9

Q ss_pred             CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC--C---C---HHHHHHHHHHH
Q ss_conf             73699826652145775297288722688640007899999997620169718998278--9---9---79999999982
Q gi|254780537|r  184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSEST--N---S---DQPAKQVAYET  255 (294)
Q Consensus       184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~--~---~---~~~~~~ia~e~  255 (294)
                      +-.++++-....||.+..|+.+..+.....+.+|      ++.+.|+++++..|+.=+.  .   .   ...++..|-+.
T Consensus        28 Gf~l~AT~gTa~~L~e~~gi~~~~v~~~~~~g~~------~i~~~i~~g~i~~VIn~~~~~~~~~~~~d~~~iRR~Av~~  101 (120)
T 1b93_A           28 QHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQ------QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVW  101 (120)
T ss_dssp             TSEEEEETTHHHHHHHHHCCCCEEECCGGGTHHH------HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHT
T ss_pred             CCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCC------CHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf             9859977429999997259716876305666676------5999997698338997577767876523299999999971


Q ss_pred             CCCEE
Q ss_conf             99344
Q gi|254780537|r  256 NASYG  260 (294)
Q Consensus       256 ~~~~~  260 (294)
                      +++..
T Consensus       102 ~Vpl~  106 (120)
T 1b93_A          102 NIPVA  106 (120)
T ss_dssp             TCCEE
T ss_pred             CCCEE
T ss_conf             99556


No 77 
>>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiamine diphosphate; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* (A:192-368)
Probab=35.73  E-value=28  Score=15.04  Aligned_cols=82  Identities=13%  Similarity=0.242  Sum_probs=46.2

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECCCC--CCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf             35882899975--------2899999985189148999626889--8012022712457760378999988761068999
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEAGN--DSHSYQVTSADAIKIQNADLILCNGLHLEETYMK   89 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~g~--dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~   89 (294)
                      .+++|.|++--        ..+..+++..+-..  +++....|.  +-|-+...+.--..+++||+++..|..+-.+...
T Consensus        19 ~A~rPvii~G~~~~~~~a~~~l~~lae~~g~Pv--~~~~~~k~~~~~~~p~~~g~~~~~~l~~aDlii~iG~~~~~~~~~   96 (177)
T 2q28_A           19 KAERPLIILGKGAAYSQADEQLREFIESAQIPF--LPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAH   96 (177)
T ss_dssp             HCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCE--EECGGGTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGGG
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             336987999535333257999999975325875--221111345666686433544021203200022223432222343


Q ss_pred             HHHHCCCCCCCCCC
Q ss_conf             99742355752111
Q gi|254780537|r   90 YFTNLKKGTKIITV  103 (294)
Q Consensus        90 ~~~~~~~~~~~i~~  103 (294)
                      ......+..++|.+
T Consensus        97 ~~~~~~~~~~vi~i  110 (177)
T 2q28_A           97 GKKGWAADTQFIQL  110 (177)
T ss_dssp             GTTTSCTTCEEEEE
T ss_pred             CCCCCCCCCCCCCC
T ss_conf             21236865443345


No 78 
>>1o4v_A Phosphoribosylaminoimidazole mutase PURE; TM0446, structural genomics, JCSG, PSI, protein structure initiative; 1.77A {Thermotoga maritima} (A:)
Probab=35.31  E-value=28  Score=15.00  Aligned_cols=101  Identities=12%  Similarity=0.046  Sum_probs=49.9

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC------CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             037899998876106899999742355752111237------42022210012334630111221356789999999998
Q gi|254780537|r   71 QNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDG------INPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKAL  144 (294)
Q Consensus        71 ~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~------i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L  144 (294)
                      .++++||.. .|++.-+.-++... -..++|.+.-.      ++.+...-..-  .+ =|=.=...+|..-.+.....-|
T Consensus        67 ~~~~viIa~-AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~~G~d~llS~v~Mp--~g-~pvatV~Id~~~nAA~~A~~Il  141 (183)
T 1o4v_A           67 RGIEVIIAG-AGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMP--GG-VPVATVAINNAKNAGILAASIL  141 (183)
T ss_dssp             TTCCEEEEE-EESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCC--TT-CCCEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEEE-CCCCCCCCCEEEEE-CCEEEEECCCCCCCCCCHHHHHHHCCCC--CC-CCEEEEECCCHHHHHHHHHHHH
T ss_conf             699599997-15766787548884-1502685146666677576788742488--88-8767775376589999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             64318889999998998630145533789988
Q gi|254780537|r  145 TALDPSNAKKYELNAREYSEKIRNSILPLKTR  176 (294)
Q Consensus       145 ~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~  176 (294)
                      .-.||+-++..+........++..-++++++.
T Consensus       142 ~~~d~~l~~kl~~~r~~~~~~v~~~d~~l~~~  173 (183)
T 1o4v_A          142 GIKYPEIARKVKEYKERMKREVLEKAQRLEQI  173 (183)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             56899999999999999999999899999998


No 79 
>>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3d7k_A* (A:182-367)
Probab=35.10  E-value=28  Score=14.98  Aligned_cols=135  Identities=9%  Similarity=0.012  Sum_probs=61.5

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECC----CCCCCCCC----CCHHHHHHHCCCCEEEEECCCC
Q ss_conf             35882899975--------28999999851891489996268----89801202----2712457760378999988761
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEA----GNDSHSYQ----VTSADAIKIQNADLILCNGLHL   83 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~----g~dpH~ye----~tp~d~~~i~~Adliv~~G~~~   83 (294)
                      .+++|.|++--        ..+..+++.++-..+.  +....    ..+|+..-    -++.-...+.+||+++..|..+
T Consensus        22 ~A~rP~ii~G~~~~~~~a~~~l~~lae~lg~Pv~~--t~~~~g~~~~~~p~~~G~~~~~~~~~~~~~~~aDlil~iG~~~   99 (186)
T 2uz1_A           22 KAERPVIVLGSEASRTARKTALSAFVAATGVPVFA--DYEGLSMLSGLPDAMRGGLVQNLYSFAKADAAPDLVLMLGARF   99 (186)
T ss_dssp             HCSSEEEEECHHHHHHTCHHHHHHHHHHHCCCEEE--CGGGGGGGTTSCGGGEEEEGGGGGGTTTTTCCCSEEEEESCCS
T ss_pred             HCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             28898799832422102689999999971974222--2000122356753002233101466665412542103321011


Q ss_pred             CHHHHHHH-HHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf             06899999-7423557521112374202221001233463011122135678999999999864-318889999998998
Q gi|254780537|r   84 EETYMKYF-TNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTA-LDPSNAKKYELNARE  161 (294)
Q Consensus        84 E~~~~~~~-~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~-~dP~~~~~y~~N~~~  161 (294)
                      -.+..... .....+.++|.+..  +....    ..+...+-++.-|+   ...+..+...|.. .+|.......+....
T Consensus       100 ~~~~~~~~~~~~~~~~~iI~id~--d~~~~----~~~~~~~~~i~~d~---~~~l~~L~~~l~~~~~~~~~~~~~~~~~~  170 (186)
T 2uz1_A          100 GLNTGHGSGQLIPHSAQVIQVDP--DACEL----GRLQGIALGIVADV---GGTIEALAQATAQDAAWPDRGDWCAKVTD  170 (186)
T ss_dssp             SGGGTTTSCSSSCTTSEEEEECS--CGGGT----TSSSCCSEEECSCH---HHHHHHHHHHHTTSCCCCCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCC--HHHHH----HCCCCHHEECCCCH---HHHHHHHHHHHHCCCHHCCCCCCCHHHHH
T ss_conf             11212465556774323333562--13332----10211000000011---15667678875112100012322001210


Q ss_pred             HHCC
Q ss_conf             6301
Q gi|254780537|r  162 YSEK  165 (294)
Q Consensus       162 ~~~~  165 (294)
                      ..++
T Consensus       171 ~~~~  174 (186)
T 2uz1_A          171 LAQE  174 (186)
T ss_dssp             HHHH
T ss_pred             CCCC
T ss_conf             0111


No 80 
>>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A* (A:1-93,A:210-255)
Probab=34.73  E-value=29  Score=14.94  Aligned_cols=68  Identities=10%  Similarity=0.221  Sum_probs=42.8

Q ss_pred             HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCC-HHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             4577529728872268864000789999999762016971899827899-799999999829934443201237
Q gi|254780537|r  196 YLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNS-DQPAKQVAYETNASYGGVLYVDSL  268 (294)
Q Consensus       196 Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~-~~~~~~ia~e~~~~~~~~~~~d~l  268 (294)
                      |+++.-++.    .|..+..+. -+...++.+.+.+.+++.|+.--+.. ....+.+.+...++++++...|.+
T Consensus        30 Y~aD~a~~P----YG~Ks~eeI-~~~~~~iv~~L~~~~vk~IVIACNTASa~aL~~LR~~~~iPVIGvI~~~~~   98 (139)
T 2jfz_A           30 YYGDSARVP----YGTKDPTTI-KQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVISGDAI   98 (139)
T ss_dssp             EEECTTTCC----CTTSCHHHH-HHHHHHHHHHHGGGCCSCEEECCHHHHHHTHHHHHHHCSSCEECSSHHHHH
T ss_pred             EEECCCCCC----CCCCCHHHH-HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCHHHHH
T ss_conf             995378899----899999999-999999999876336567887054687742688864486179966408999


No 81 
>>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase; 2.35A {Vibrio cholerae} (A:197-381)
Probab=34.46  E-value=15  Score=16.87  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=22.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             11221356789999999998643188899999989986
Q gi|254780537|r  125 HAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREY  162 (294)
Q Consensus       125 H~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~  162 (294)
                      -.|+.+.+...+++.|...+  .||+....+.+|+++|
T Consensus       150 ~g~~~~~d~~~l~~~i~~ll--~d~~~~~~~~~~ar~y  185 (185)
T 3dzc_A          150 TVKLVGTNQQQICDALSLLL--TDPQAYQAMSQAHNPY  185 (185)
T ss_dssp             SEEECTTCHHHHHHHHHHHH--HCHHHHHHHHTSCCTT
T ss_pred             EEEECCCCHHHHHHHHHHHH--CCHHHHHHHCCCCCCC
T ss_conf             16987899999999999997--1978776404478989


No 82 
>>1m1n_B Nitrogenase molybdenum-iron protein beta chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (B:33-63,B:339-522)
Probab=33.30  E-value=30  Score=14.79  Aligned_cols=105  Identities=13%  Similarity=0.081  Sum_probs=56.0

Q ss_pred             HHHHHHHHCCCCCCCEEEEECCC----CHHHHHHCCCEEEEECCCCCCCC--------------------CCHHHHHHHH
Q ss_conf             78998863078447369982665----21457752972887226886400--------------------0789999999
Q gi|254780537|r  171 LPLKTRIEKVDPEKRWFVTSEGC----LVYLAEDFGFKSLYLWPINSDSE--------------------RSPSMMRHAI  226 (294)
Q Consensus       171 ~~~~~~~~~~p~~~~~~v~~H~a----f~Y~~~~yGl~~~~~~~~~~~~e--------------------ps~~~l~~~~  226 (294)
                      ..++..+.    ++|.+|..-+.    +.-|.++.|++++.+.......+                    .-..+..++.
T Consensus        48 ~~~~~~l~----GKrv~I~gd~~~~~~la~fL~ElGm~vv~~~~~~~~~~~~e~~~~~l~~~~~~~~~~v~~~~d~~e~~  123 (215)
T 1m1n_B           48 TDSHTWLH----GKRFALWGDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLR  123 (215)
T ss_dssp             HHHHHHHT----TCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHH
T ss_pred             HHHHHHHC----CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHH
T ss_conf             99999747----98799988828999999999986997349994589978999999998525568787799689999999


Q ss_pred             HHHCCCCCEEEEEECCCCHHH----HHHHHHHHCCCEEEE--EECCCCCCCCCCCCCHHHH
Q ss_conf             762016971899827899799----999999829934443--2012378777886899999
Q gi|254780537|r  227 NQMRSHKIKFIFSESTNSDQP----AKQVAYETNASYGGV--LYVDSLSKPDGPAPTYLDL  281 (294)
Q Consensus       227 ~~ik~~~v~~if~e~~~~~~~----~~~ia~e~~~~~~~~--~~~d~l~~~~~~~~~Y~~~  281 (294)
                      +.|++.+...+|..+  ..+.    .+.+++..|++....  ...|-++....+--+|-+.
T Consensus       124 ~~i~~~~pDLiig~s--~ek~~a~~~r~~a~~lgiPli~~g~P~~d~~~~~~~p~~GY~Ga  182 (215)
T 1m1n_B          124 SLVFTDKPDFMIGNS--YGKFIQRDTLHKGKEFEVPLIRIGFPIFDRHHLHRSTTLGYEGA  182 (215)
T ss_dssp             HHHHHSCCSEEEECT--THHHHHHHHHHHCGGGCCCEEECSSCCCSSSSGGGCCCSHHHHH
T ss_pred             HHHHHCCCCEEEECC--CCHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCHHHHH
T ss_conf             998627999999788--53001123456787649987982177478645777765238789


No 83 
>>3lmz_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis} (A:)
Probab=33.00  E-value=31  Score=14.75  Aligned_cols=53  Identities=4%  Similarity=-0.107  Sum_probs=25.0

Q ss_pred             CCCEEEEECHH-----HHH---HHHHHCCCEEEEEEEECCCCCCCCCCCCHHHH----HHHCCCCEEEEEC
Q ss_conf             88289997528-----999---99985189148999626889801202271245----7760378999988
Q gi|254780537|r   22 QKKVVLSSFSI-----IGD---ITQNIAKDLVTVTTLVEAGNDSHSYQVTSADA----IKIQNADLILCNG   80 (294)
Q Consensus        22 ~~~~Vv~s~~p-----l~~---iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~----~~i~~Adliv~~G   80 (294)
                      .+.++..++..     +.+   .+++.|-+.+++   .+..   +....++.++    +.+.+..+-+...
T Consensus        16 ~~mkig~~~~~~~~~~l~~~l~~~~~~G~~~iel---~~~~---~~~~~~~~~~~~~~~~~~~~gl~~~~~   80 (257)
T 3lmz_A           16 NPFHLGXAGYTFVNFDLDTTLKTLERLDIHYLCI---KDFH---LPLNSTDEQIRAFHDKCAAHKVTGYAV   80 (257)
T ss_dssp             CSSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEE---CTTT---SCTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE---CCCC---CCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf             9867999712268999999999999869998996---3677---787899999999999998619889981


No 84 
>>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide formyl transferase; purine ribonucleotide biosynthesis, PURT; HET: ADP; 1.70A {Pyrococcus horikoshii OT3} PDB: 2czg_A* (A:1-108)
Probab=31.55  E-value=32  Score=14.60  Aligned_cols=77  Identities=10%  Similarity=0.025  Sum_probs=47.4

Q ss_pred             CCCCCEEEEECCCC----HHHHHHCCCEEEEECCCCCCC----------CCCHHHHHHHHHHHCCCCCEEEEEECC-CCH
Q ss_conf             84473699826652----145775297288722688640----------007899999997620169718998278-997
Q gi|254780537|r  181 DPEKRWFVTSEGCL----VYLAEDFGFKSLYLWPINSDS----------ERSPSMMRHAINQMRSHKIKFIFSEST-NSD  245 (294)
Q Consensus       181 p~~~~~~v~~H~af----~Y~~~~yGl~~~~~~~~~~~~----------eps~~~l~~~~~~ik~~~v~~if~e~~-~~~  245 (294)
                      |..++.+|..-.-.    ..-+++.|++++.+-. +++.          ..+..+...+.+++++.++.+|.+|.. .+-
T Consensus        17 ~~~~kilIlG~Gqla~~l~~aa~~lG~~~~~~d~-~~~~pa~~~ad~~~~~~~~D~~~i~~~a~~~~~D~I~~e~e~i~~   95 (108)
T 2dwc_A           17 DSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDR-YANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINL   95 (108)
T ss_dssp             TTCCEEEEESCSHHHHHHHHHHHHTTCEEEEEES-STTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCSCH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC-CCCCCHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCH
T ss_conf             9988999999789999999999987998999979-898857774565897899999999999987399999968887578


Q ss_pred             HHHHHHHHHHCCCE
Q ss_conf             99999999829934
Q gi|254780537|r  246 QPAKQVAYETNASY  259 (294)
Q Consensus       246 ~~~~~ia~e~~~~~  259 (294)
                      ..++.+ ++.|+++
T Consensus        96 ~~~~~~-e~~Gi~v  108 (108)
T 2dwc_A           96 DALFEF-EKDGYFV  108 (108)
T ss_dssp             HHHHHH-HHTTCCB
T ss_pred             HHHHHH-HHHCCCC
T ss_conf             999999-8616624


No 85 
>>3kuu_A Phosphoribosylaminoimidazole carboxylase catalytic subunit PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structural genomics; 1.41A {Yersinia pestis} PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* (A:)
Probab=31.18  E-value=33  Score=14.56  Aligned_cols=39  Identities=8%  Similarity=0.036  Sum_probs=20.8

Q ss_pred             CHHHHHHH------CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             71245776------037899998876106899999742355752111
Q gi|254780537|r   63 TSADAIKI------QNADLILCNGLHLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        63 tp~d~~~i------~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      +|..+.++      .+.++||.. .|++..+.-.+.... ..++|.+
T Consensus        52 ~p~~l~~~~~~~~~~~~~viIa~-AG~aa~Lpgvva~~t-~~PVIgv   96 (174)
T 3kuu_A           52 TPDRLFSFAEQAEANGLHVIIAG-NGGAAHLPGXLAAKT-LVPVLGV   96 (174)
T ss_dssp             CHHHHHHHHHHTTTTTCSEEEEE-EESSCCHHHHHHHTC-SSCEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEE-CCCCCCCCHHHHHHC-CCCCCCC
T ss_conf             81788888999986498399981-477544501677735-6762123


No 86 
>>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondrial; NAD dependent deacetylase, sirtuin, substrate peptide complex, hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A (A:1-40,A:108-133,A:189-264)
Probab=31.15  E-value=33  Score=14.55  Aligned_cols=74  Identities=18%  Similarity=0.246  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHC-CCEEEEEEEECCCCCC-CCC-----------------------CCCHHHHHHHCCCCEEEEECCCCCH
Q ss_conf             28999999851-8914899962688980-120-----------------------2271245776037899998876106
Q gi|254780537|r   31 SIIGDITQNIA-KDLVTVTTLVEAGNDS-HSY-----------------------QVTSADAIKIQNADLILCNGLHLEE   85 (294)
Q Consensus        31 ~pl~~iv~~I~-gd~v~V~~li~~g~dp-H~y-----------------------e~tp~d~~~i~~Adliv~~G~~~E~   85 (294)
                      .-+.++++-|- |..-++..|+..|.+. .-.                       .-.......+.+||+++..|-.+.-
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~gag~s~~~gi~~c~g~lrp~iv~F~E~~~~~~~~~~~~a~~~~~~aDLlIViGTSL~V   88 (142)
T 3glr_A            9 LSLQDVAELIRARACQRVVVMVGAGISTPSGILLRLYTQNIDGLERVSGIPASKLVEALLHVVDFPMADLLLILGTSLEV   88 (142)
T ss_dssp             CCHHHHHHHHHTTSCCCEEEEECGGGTGGGTCEEEEEECCCSCHHHHTTCCGGGEEETGGHHHHHHHCSEEEEESCCCCE
T ss_pred             CCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEECCCCCHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEECCCCEE
T ss_conf             49999999998579996999938711120288746985355116866599953231449999999659999998987857


Q ss_pred             H-HHHHHHHCCCCCCCCCCC
Q ss_conf             8-999997423557521112
Q gi|254780537|r   86 T-YMKYFTNLKKGTKIITVT  104 (294)
Q Consensus        86 ~-~~~~~~~~~~~~~~i~~~  104 (294)
                      + ...+......+.+++.+.
T Consensus        89 ~P~a~Lv~~a~~~~p~vlIN  108 (142)
T 3glr_A           89 EPFASLTEAVRSSVPRLLIN  108 (142)
T ss_dssp             ETTGGGGGSSCTTSCEEEEE
T ss_pred             CCHHHHHHHHHCCCCEEEEE
T ss_conf             58868999998799899990


No 87 
>>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cancer cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} (A:54-132)
Probab=30.85  E-value=33  Score=14.52  Aligned_cols=56  Identities=14%  Similarity=0.289  Sum_probs=36.1

Q ss_pred             CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCH--HHHHHHHHHHC
Q ss_conf             52145775297288722688640007899999997620169718998278997--99999999829
Q gi|254780537|r  193 CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSD--QPAKQVAYETN  256 (294)
Q Consensus       193 af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~--~~~~~ia~e~~  256 (294)
                      ++.|+++.+|++..-+..   +. .++    .-++.++..+.++++++.....  +.++.++++.+
T Consensus        15 a~A~~a~~~g~~~~iv~p---~~-~~~----~k~~~~~~~Ga~Vi~~~~~~~~~~~~a~~~a~~~g   72 (79)
T 2rkb_A           15 AAAYAARKLGIPATIVLP---ES-TSL----QVVQRLQGEGAEVQLTGKVWDEANLRAQELAKRDG   72 (79)
T ss_dssp             HHHHHHHHHTCCEEEEEC---TT-CCH----HHHHHHHHTTCEEEECCSSHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHCCCCCEEECCC---CC-CHH----HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             988745214643043155---21-022----67776520486422357531101599999987539


No 88 
>>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein structure initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} (A:)
Probab=30.41  E-value=34  Score=14.47  Aligned_cols=18  Identities=11%  Similarity=0.196  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             221356789999999998
Q gi|254780537|r  127 WMSLTNAMIYIENIRKAL  144 (294)
Q Consensus       127 Wldp~~~~~~a~~I~~~L  144 (294)
                      |+.|.+...++++|...+
T Consensus       143 ~~~~~~~~~l~~~i~~~~  160 (177)
T 2f9f_A          143 YLVNADVNEIIDAXKKVS  160 (177)
T ss_dssp             EEECSCHHHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHH
T ss_conf             981889999999999998


No 89 
>>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus} (A:46-136,A:384-458)
Probab=30.39  E-value=34  Score=14.47  Aligned_cols=54  Identities=15%  Similarity=0.110  Sum_probs=41.4

Q ss_pred             ECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             266521457752972887226886400078999999976201697189982789
Q gi|254780537|r  190 SEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTN  243 (294)
Q Consensus       190 ~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~  243 (294)
                      .+..+..|++.+|-.........+.....+..+.+.+...+..+|+.+|.-...
T Consensus        70 ~~~~~~~~~~~~G~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~l~~~~~N  123 (166)
T 2e7z_A           70 EYGTLRRFMNLLGSPNWTSAMYMGAFMANPTALFTAMATEKPYPVKAFFALASN  123 (166)
T ss_dssp             CTTHHHHHHHHHTCCCEECGGGSSCSCCCHHHHHHHHHHCCSSCCCEEEEESCC
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             999999999970999767863066433463167777650377752899993786


No 90 
>>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* (A:29-134)
Probab=29.66  E-value=28  Score=14.97  Aligned_cols=81  Identities=11%  Similarity=0.054  Sum_probs=43.4

Q ss_pred             HHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEEC--CCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             8630145533789988630784473699826652145775297288722--68864000789999999762016971899
Q gi|254780537|r  161 EYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLW--PINSDSERSPSMMRHAINQMRSHKIKFIF  238 (294)
Q Consensus       161 ~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~--~~~~~~eps~~~l~~~~~~ik~~~v~~if  238 (294)
                      ++.++...+-..+++... ...+.+..+-.++...|+.-.+|.-..+..  .+++  .-++.++   ...++..+.++||
T Consensus         3 el~~~~~~~A~~L~~~~~-~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~--~~~~~~l---~~~l~~s~~~~ii   76 (106)
T 3e7w_A            3 ELWEQSDRAAAAIQKRIS-GEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPVDL--SIPSERI---AKIIESSGAELLI   76 (106)
T ss_dssp             HHHHHHHHHHHHHTTTSC-SSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEEET--TSCHHHH---HHHHHHHTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEECC--CCCHHHH---HHHHHHCCCCEEE
T ss_conf             999999999999998469-999999999858999999999999985969997288--8999999---9999856998999


Q ss_pred             EECCCCHHH
Q ss_conf             827899799
Q gi|254780537|r  239 SESTNSDQP  247 (294)
Q Consensus       239 ~e~~~~~~~  247 (294)
                      ++...-++.
T Consensus        77 ~~~~~~~~~   85 (106)
T 3e7w_A           77 HAAGLSIDA   85 (106)
T ss_dssp             ESSSCCTTC
T ss_pred             EECCCCCCC
T ss_conf             851332210


No 91 
>>1wpb_A Hypothetical protein YFBU; structural genomics, MCSG, NCS, regulatory protein, protein structure initiative, PSI; 2.00A {Escherichia coli} (A:1-60)
Probab=29.60  E-value=35  Score=14.38  Aligned_cols=30  Identities=33%  Similarity=0.582  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999998643188899999989986301
Q gi|254780537|r  135 IYIENIRKALTALDPSNAKKYELNAREYSEK  165 (294)
Q Consensus       135 ~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~  165 (294)
                      .+..+=..-++.+||+|++.|+ ++++..++
T Consensus        17 LILsNQY~lM~~LdP~Na~kY~-RlqtIver   46 (60)
T 1wpb_A           17 LILSNQYKMMTMLDPANAERYR-RLQTIIER   46 (60)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCHHHHH-HHHHHHHC
T ss_conf             9999899999861920002299-99999976


No 92 
>>2d59_A Hypothetical protein PH1109; COA binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.65A {Pyrococcus horikoshii OT3} (A:)
Probab=29.30  E-value=35  Score=14.35  Aligned_cols=70  Identities=13%  Similarity=0.095  Sum_probs=48.5

Q ss_pred             CCCHH----HHHHCCCEEEEECCCCC----------------CCC-----CCHHHHHHHHHHHCCCCCEEEEEECCCCHH
Q ss_conf             65214----57752972887226886----------------400-----078999999976201697189982789979
Q gi|254780537|r  192 GCLVY----LAEDFGFKSLYLWPINS----------------DSE-----RSPSMMRHAINQMRSHKIKFIFSESTNSDQ  246 (294)
Q Consensus       192 ~af~Y----~~~~yGl~~~~~~~~~~----------------~~e-----ps~~~l~~~~~~ik~~~v~~if~e~~~~~~  246 (294)
                      ..++|    ...++|+++.++.....                ..+     ..|+...++.+.+.+.+++.++..+.--+.
T Consensus        35 ~~~g~~v~~~l~~~G~~V~~V~p~~~~i~g~~~~~sl~elp~~~Dlv~i~~p~~~~~~i~~e~~~~g~k~v~~~~~g~~e  114 (144)
T 2d59_A           35 ERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNR  114 (144)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCH
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf             98259999999978998999897333007974566420146765079998588999999999997299999994264499


Q ss_pred             HHHHHHHHHCCCEEE
Q ss_conf             999999982993444
Q gi|254780537|r  247 PAKQVAYETNASYGG  261 (294)
Q Consensus       247 ~~~~ia~e~~~~~~~  261 (294)
                      .+..++++.|+++++
T Consensus       115 ~~~~~a~~~gi~vvg  129 (144)
T 2d59_A          115 EASKKADEAGLIIVA  129 (144)
T ss_dssp             HHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHCCCEEEC
T ss_conf             999999996998895


No 93 
>>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} (A:1-111,A:300-332)
Probab=29.03  E-value=36  Score=14.32  Aligned_cols=85  Identities=19%  Similarity=0.139  Sum_probs=45.2

Q ss_pred             CCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHH-HHHCCCCEEEEECC-CCCHHHHHHHHHC
Q ss_conf             643358828999752899999985189148999626889801202271245-77603789999887-6106899999742
Q gi|254780537|r   17 ASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADA-IKIQNADLILCNGL-HLEETYMKYFTNL   94 (294)
Q Consensus        17 ~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~-~~i~~Adliv~~G~-~~E~~~~~~~~~~   94 (294)
                      .+....+++|+.+-+......+.+-...-.+....       ....++.++ +.++++|.++..+. .+..-+   +...
T Consensus         9 ~~~~~~k~~Vl~~~~~~~~~~~~L~~~~~~~~~~~-------~~~~~~eel~e~i~daD~Ii~~~~~~i~~e~---L~~~   78 (144)
T 3k5p_A            9 LSLSRDRINVLLLEGISQTAVEYFKSSGYTNVTHL-------PKALDKADLIKAISSAHIIGIRSRTQLTEEI---FAAA   78 (144)
T ss_dssp             ---CGGGSCEEECSCCCHHHHHHHHHTTCCCEEEC-------SSCCCHHHHHHHHTTCSEEEECSSCCBCHHH---HHHC
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC-------CCCCCHHHHHHHHCCCCEEEECCCCCCCHHH---HHCC
T ss_conf             54556787799928999999999997899899968-------9999999999984699399987899879999---9409


Q ss_pred             CCCCCCC-CCCCCCCHHHH
Q ss_conf             3557521-11237420222
Q gi|254780537|r   95 KKGTKII-TVTDGINPIGV  112 (294)
Q Consensus        95 ~~~~~~i-~~~~~i~~~~~  112 (294)
                       ++.+.| ..+-|.+.++.
T Consensus        79 -p~LK~I~~~gvG~D~IDl   96 (144)
T 3k5p_A           79 -NRLIAVGCFSVGTNQVEL   96 (144)
T ss_dssp             -TTCCEEEECSSCCTTBCH
T ss_pred             -CCCEEEEECCCCCCCCCC
T ss_conf             -997199988854465461


No 94 
>>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* (A:233-392)
Probab=28.96  E-value=31  Score=14.68  Aligned_cols=71  Identities=8%  Similarity=-0.060  Sum_probs=43.4

Q ss_pred             HHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45776037899998876106899999742355752111237420222100123346301112213567899999999986
Q gi|254780537|r   66 DAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALT  145 (294)
Q Consensus        66 d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~  145 (294)
                      -..-+++||+++... ..|++-.++++....+..+|....+......        .....++.++.+...+++.|...+.
T Consensus        76 ~~~~~~~~di~i~~~-~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~~--------~~~~~~~~~~~d~~~~~~~i~~l~~  146 (160)
T 2x0d_A           76 YADLLKRSSIGISLX-ISPHPSYPPLEXAHFGLRVITNKYENKDLSN--------WHSNIVSLEQLNPENIAETLVELCX  146 (160)
T ss_dssp             HHHHHHHCCEEECCC-SSSSCCSHHHHHHHTTCEEEEECBTTBCGGG--------TBTTEEEESSCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEECC-CCCCCCHHHHHHHHCCCCEEEECCCCCCEEE--------ECCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             999999649899832-5566766899999859939995799852578--------8897899889999999999999984


No 95 
>>1x7f_A Outer surface protein; structural genomics, unknown function, protein structure initiative, MCSG, PSI; 2.30A {Bacillus cereus atcc 14579} (A:1-267)
Probab=28.87  E-value=36  Score=14.30  Aligned_cols=69  Identities=9%  Similarity=0.039  Sum_probs=39.8

Q ss_pred             CEEEEECCCCH---------------HHHHHCCCEEEEECCC-C--------CCCCCCHH------HHHHHHHHHCCCCC
Q ss_conf             36998266521---------------4577529728872268-8--------64000789------99999976201697
Q gi|254780537|r  185 RWFVTSEGCLV---------------YLAEDFGFKSLYLWPI-N--------SDSERSPS------MMRHAINQMRSHKI  234 (294)
Q Consensus       185 ~~~v~~H~af~---------------Y~~~~yGl~~~~~~~~-~--------~~~eps~~------~l~~~~~~ik~~~v  234 (294)
                      ..+.+.|+=|.               -+.++||++..+...- .        .++-||..      -..++........|
T Consensus       165 ~~l~acHNFYPr~~TGLs~~~f~~~n~~~k~~gi~t~AFI~g~~~~rGPwpl~eGLPTLE~HR~~~~~~aa~~L~~~g~i  244 (267)
T 1x7f_A          165 SALIGCHNFYPQKFTGLPYDYFIRCSERFKKHGIRSAAFITSHVANIGPWDINDGLCTLEEHRNLPIEVQAKHLWATGLI  244 (267)
T ss_dssp             GGEEEECCCBCSTTCSBCHHHHHHHHHHHHHTTCCCEEEECCSSCCBCSSSCCSCCBSBGGGTTSCHHHHHHHHHHTTSC
T ss_pred             HHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCC
T ss_conf             54799866679987788999999999999976998799943787788985225898847776799999999999863898


Q ss_pred             EEEE-EECCCCHHHHHHHHH
Q ss_conf             1899-827899799999999
Q gi|254780537|r  235 KFIF-SESTNSDQPAKQVAY  253 (294)
Q Consensus       235 ~~if-~e~~~~~~~~~~ia~  253 (294)
                      ..|+ .++..+.+..+.+++
T Consensus       245 D~V~IGD~~~s~~el~~l~~  264 (267)
T 1x7f_A          245 DDVIIGNAYASEEELEKLGN  264 (267)
T ss_dssp             CEEEECSBCCCHHHHHHHHH
T ss_pred             CEEEECCCCCCHHHHHHHHH
T ss_conf             98997688589999999998


No 96 
>>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri} (G:)
Probab=28.86  E-value=36  Score=14.30  Aligned_cols=26  Identities=15%  Similarity=-0.031  Sum_probs=18.2

Q ss_pred             CHHHHHHHCCCCEEEEECCCCCHHHH
Q ss_conf             71245776037899998876106899
Q gi|254780537|r   63 TSADAIKIQNADLILCNGLHLEETYM   88 (294)
Q Consensus        63 tp~d~~~i~~Adliv~~G~~~E~~~~   88 (294)
                      ++.-...+++||+++..|..+..+..
T Consensus        98 ~~~~~~~~~~aDlii~iG~~~~~~~t  123 (170)
T 3cf4_G           98 KWPGLDGNGNYDMIITIGFKKFYINQ  123 (170)
T ss_dssp             TCCCSSSSCCCSEEEEESCCHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf             78888533467889995770042141


No 97 
>>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* (A:73-154)
Probab=28.72  E-value=36  Score=14.28  Aligned_cols=58  Identities=19%  Similarity=0.273  Sum_probs=38.4

Q ss_pred             CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCH--HHHHHHHHHHCCC
Q ss_conf             52145775297288722688640007899999997620169718998278997--9999999982993
Q gi|254780537|r  193 CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSD--QPAKQVAYETNAS  258 (294)
Q Consensus       193 af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~--~~~~~ia~e~~~~  258 (294)
                      ++.|.++.+|++...+..   .. .++    .-++.++..+..+++++.....  ..++.++++.+.-
T Consensus        18 a~A~~a~~~G~~~~iv~p---~~-~~~----~k~~~l~~~GA~Vi~~~~~~~~~~~~a~~~a~~~~~~   77 (82)
T 3l6b_A           18 ALTYAAKLEGIPAYIVVP---QT-APD----CKKLAIQAYGASIVYCEPSDESRENVAKRVTEETEGI   77 (82)
T ss_dssp             HHHHHHHHTTCCEEEEEE---TT-SCH----HHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHCCCCCCCCCC---HH-HHH----HHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCE
T ss_conf             999999985998655686---05-678----9988875168743870550456666666667504853


No 98 
>>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12} (A:)
Probab=28.55  E-value=36  Score=14.26  Aligned_cols=66  Identities=17%  Similarity=0.038  Sum_probs=37.4

Q ss_pred             CEEEEECHH----HH-HHHHHHCCC-EEEEEEEEC-C---------------CCCCCCCCCCHHHHHHHCCCCEEEEECC
Q ss_conf             289997528----99-999985189-148999626-8---------------8980120227124577603789999887
Q gi|254780537|r   24 KVVLSSFSI----IG-DITQNIAKD-LVTVTTLVE-A---------------GNDSHSYQVTSADAIKIQNADLILCNGL   81 (294)
Q Consensus        24 ~~Vv~s~~p----l~-~iv~~I~gd-~v~V~~li~-~---------------g~dpH~ye~tp~d~~~i~~Adliv~~G~   81 (294)
                      ...|++-+.    ++ -+.+..+++ .++.-.+.. +               |.|+..+.+.+-+...+.++|+||..+.
T Consensus        25 VLFVC~~N~~RS~mAEai~~~~~~~~~v~Sag~~~~~~~~~~p~a~~~l~~~gid~~~~~s~~l~~~~~~~~DlIitm~~  104 (167)
T 2fek_A           25 ILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEK  104 (167)
T ss_dssp             EEEEESSSSSHHHHHHHHHHHHCTTCEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHHHSSEEEESCH
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEHH
T ss_conf             89992894789999999999718988378253467789877857999999854564455322116876224678841059


Q ss_pred             CCCHHHHH
Q ss_conf             61068999
Q gi|254780537|r   82 HLEETYMK   89 (294)
Q Consensus        82 ~~E~~~~~   89 (294)
                      +.-..+..
T Consensus       105 ~~~~~l~~  112 (167)
T 2fek_A          105 RHIERLCE  112 (167)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             89999999


No 99 
>>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} (A:)
Probab=28.52  E-value=36  Score=14.26  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             356789999999998643188899999989986301455
Q gi|254780537|r  130 LTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRN  168 (294)
Q Consensus       130 p~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~  168 (294)
                      -...+.+...|...|.+..|+.-+.|.+++..|.+++..
T Consensus        91 ~~yiK~YmK~i~~~L~e~~~e~v~~Fk~~a~~~vK~il~  129 (174)
T 1yz1_A           91 KKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA  129 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999986610988999999886999999873


No 100
>>2q7x_A UPF0052 protein SP_1565; NP_346012.1, uncharacterized protein SP_1565, structural genomics, joint center for structural genomics; HET: MLY MSE; 2.00A {Streptococcus pneumoniae TIGR4} (A:1-46,A:122-130,A:172-326)
Probab=28.15  E-value=33  Score=14.52  Aligned_cols=26  Identities=15%  Similarity=0.130  Sum_probs=20.0

Q ss_pred             CCCCHHHHHHHCCCCEEEEE-CCCCCH
Q ss_conf             02271245776037899998-876106
Q gi|254780537|r   60 YQVTSADAIKIQNADLILCN-GLHLEE   85 (294)
Q Consensus        60 ye~tp~d~~~i~~Adliv~~-G~~~E~   85 (294)
                      =++.|.-+.+|++||+|++- |--|.+
T Consensus        56 ~~a~p~ai~AI~~ADlIvlgPGSlyTS   82 (210)
T 2q7x_A           56 PLASRRVVQTILESDXIVLGPGSLFTS   82 (210)
T ss_dssp             CCBCSHHHHHHHHCSEEEECSSCCCCC
T ss_pred             CCCCHHHHHHHHHCCEEEECCCCCHHH
T ss_conf             877999999996199899979960776


No 101
>>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* (A:202-364)
Probab=27.70  E-value=38  Score=14.17  Aligned_cols=81  Identities=20%  Similarity=0.239  Sum_probs=37.5

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEE-EECC----CCCCCCC-----CC-CHHHHHHHCCCCEEEEEC
Q ss_conf             35882899975--------2899999985189148999-6268----8980120-----22-712457760378999988
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTT-LVEA----GNDSHSY-----QV-TSADAIKIQNADLILCNG   80 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~-li~~----g~dpH~y-----e~-tp~d~~~i~~Adliv~~G   80 (294)
                      .+++|.+++--        .-+..+++..+-.   |.+ ....    ..+|+..     .. .+.-...+.+||+++..|
T Consensus        26 ~a~rP~ii~G~~~~~~~a~~~l~~lae~~~~P---v~~t~~~kg~~~e~~p~~~G~~~g~~~~~~~~~~~~~aDlii~iG  102 (163)
T 2vbf_A           26 NAQKPVVIAGHEVISFGLEKTVTQFVSETKLP---ITTLNFGKSAVDESLPSFLGIYNGKLSEISLKNFVESADFILMLG  102 (163)
T ss_dssp             HCSSEEEEECHHHHHTTCHHHHHHHHHHHCCC---EEECSTTTTSSCTTSTTEEEECCGGGSCHHHHHHHHHCSEEEEES
T ss_pred             HCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEE
T ss_conf             33551787411233310466777776414787---423454334345788656666523555312443303665104762


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             76106899999742355752111
Q gi|254780537|r   81 LHLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        81 ~~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      ..+-.+.........++.++|.+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~I~i  125 (163)
T 2vbf_A          103 VKLTDSSTGAFTHHLDENKMISL  125 (163)
T ss_dssp             CCCCGGGTTTTCCCCCGGGEEEE
T ss_pred             EECCCCCCCCCCCCCCCCCCCCC
T ss_conf             00133321112332333223345


No 102
>>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural genomics, joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans} (A:1-116)
Probab=27.55  E-value=38  Score=14.15  Aligned_cols=20  Identities=5%  Similarity=-0.076  Sum_probs=13.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q ss_conf             63011122135678999999
Q gi|254780537|r  121 EPNPHAWMSLTNAMIYIENI  140 (294)
Q Consensus       121 ~~dpH~Wldp~~~~~~a~~I  140 (294)
                      -.||.+|-||..+..+.+..
T Consensus        33 l~~p~~w~D~~~a~~i~ke~   52 (116)
T 1zbt_A           33 LSDPDVVSDTKRFXELSREE   52 (116)
T ss_dssp             -----------------CCH
T ss_pred             HCCCCHHHCHHHHHHHHHHH
T ss_conf             70984111999999999999


No 103
>>3kws_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} (A:)
Probab=27.54  E-value=38  Score=14.15  Aligned_cols=48  Identities=2%  Similarity=-0.030  Sum_probs=21.4

Q ss_pred             CCEEEEECHH-----HHHH---HHHHCCCEEEEEEEECCCCCCCCCCCCHHHHH-HHCCCCEEEE
Q ss_conf             8289997528-----9999---99851891489996268898012022712457-7603789999
Q gi|254780537|r   23 KKVVLSSFSI-----IGDI---TQNIAKDLVTVTTLVEAGNDSHSYQVTSADAI-KIQNADLILC   78 (294)
Q Consensus        23 ~~~Vv~s~~p-----l~~i---v~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~-~i~~Adliv~   78 (294)
                      ++++..+++.     +.+.   +++.|-+.+++.   +.     .+.-.+++++ .+.+..+-+.
T Consensus        25 ~~~ig~~~~~~~~~~l~~~~~~~~~~G~~~iEl~---~~-----~~~~~~~~l~~~l~~~gl~v~   81 (287)
T 3kws_A           25 ELKLSFQEGIAPGESLNEKLDFXEKLGVVGFEPG---GG-----GLAGRVNEIKQALNGRNIKVS   81 (287)
T ss_dssp             CCEEEEETTSSCCSSHHHHHHHHHHTTCCEEECB---ST-----TCGGGHHHHHHHHTTSSCEEC
T ss_pred             CHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEC---CC-----CCHHHHHHHHHHHHHHCCEEE
T ss_conf             2137677267899899999999998299999978---97-----445459999999998399589


No 104
>>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Flavobacterium heparinium} (A:1-474)
Probab=27.46  E-value=38  Score=14.14  Aligned_cols=47  Identities=13%  Similarity=0.005  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCE-EEEECHHHHHHHHHHC-CCEEEE
Q ss_conf             9269999999998604643358828-9997528999999851-891489
Q gi|254780537|r    1 MLRYFICLLFSYIPMSASATTQKKV-VLSSFSIIGDITQNIA-KDLVTV   47 (294)
Q Consensus         1 M~r~~~~l~~~~~~~~~~~~~~~~~-Vv~s~~pl~~iv~~I~-gd~v~V   47 (294)
                      |||+++++++++...+..+.+.... .+..+..++..+.... ||.+.|
T Consensus         1 Mk~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~tiq~Ai~~a~~GdtI~v   49 (474)
T 1dbg_A            1 MKMLNKLAGYLLPIMVLLNVAPCLGQVVASNETLYQVVKEVKPGGLVQI   49 (474)
T ss_dssp             -------------------------CEECSHHHHHHHHHHCCTTCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCCEEEE
T ss_conf             9069999999999999860120100550883899999971899999998


No 105
>>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori} (A:)
Probab=27.07  E-value=38  Score=14.09  Aligned_cols=63  Identities=13%  Similarity=0.036  Sum_probs=46.0

Q ss_pred             CCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHC---CCCCEEEEEECCCCHHHHHHHHHHHCC
Q ss_conf             84473699826652145775297288722688640007899999997620---169718998278997999999998299
Q gi|254780537|r  181 DPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMR---SHKIKFIFSESTNSDQPAKQVAYETNA  257 (294)
Q Consensus       181 p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik---~~~v~~if~e~~~~~~~~~~ia~e~~~  257 (294)
                      +..+..+|+|.|.|               .+..+..||+.++.++.++|+   ..+++++ +....++.-+..++.+.++
T Consensus       148 ~~~~~~vIAYEP~w---------------aIGtg~~as~~~i~~~~~~ir~~~~~~~~il-YGGsV~~~n~~~~~~~~~i  211 (233)
T 2jgq_A          148 LNYPNLVVAYEPIW---------------AIGTKKSASLEDIYLTHGFLKQILNQKTPLL-YGGSVNTQNAKEILGIDSV  211 (233)
T ss_dssp             TTCTTEEEEECCGG---------------GTTC--CCCHHHHHHHHHHHHHHSCTTSCEE-EESSCCTTTHHHHHTSTTC
T ss_pred             CCCHHHHHCCCCHH---------------HCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE-EECCCCHHHHHHHHCCCCC
T ss_conf             03124552466222---------------0355544315666666787776515676089-7076887699998578998


Q ss_pred             CE
Q ss_conf             34
Q gi|254780537|r  258 SY  259 (294)
Q Consensus       258 ~~  259 (294)
                      .-
T Consensus       212 DG  213 (233)
T 2jgq_A          212 DG  213 (233)
T ss_dssp             CE
T ss_pred             CE
T ss_conf             86


No 106
>>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} (A:)
Probab=26.48  E-value=39  Score=14.02  Aligned_cols=38  Identities=18%  Similarity=0.245  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             35678999999999864318889999998998630145
Q gi|254780537|r  130 LTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIR  167 (294)
Q Consensus       130 p~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~  167 (294)
                      -...+.+...|...|.+..|+.-+.|.+++..+.+.+.
T Consensus        88 ~~yiK~YmK~ik~~L~e~~perv~~Fk~~a~~~vK~il  125 (171)
T 1txj_A           88 SVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHIL  125 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999998765097788999987799999998


No 107
>>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate assisted catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* (A:223-410)
Probab=26.36  E-value=40  Score=14.01  Aligned_cols=90  Identities=17%  Similarity=0.156  Sum_probs=53.0

Q ss_pred             HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             57760378999988761068999997423557521112374202221001233463011122135678999999999864
Q gi|254780537|r   67 AIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTA  146 (294)
Q Consensus        67 ~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~  146 (294)
                      ..-++.+|+++... ..|++-..+++....+.++|....+.......+       .+.=+..+|.+...+++.|...+  
T Consensus        98 ~~~~~~~d~~i~~s-~~e~~~~~~~Ea~a~g~Pvi~~~~~~~~~~~~~-------~~~g~~~~~~d~~~~a~~i~~l~--  167 (188)
T 3c48_A           98 VAVYRAADIVAVPS-FNESFGLVAMEAQASGTPVIAARVGGLPIAVAE-------GETGLLVDGHSPHAWADALATLL--  167 (188)
T ss_dssp             HHHHHHCSEEEECC-SCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCB-------TTTEEEESSCCHHHHHHHHHHHH--
T ss_pred             HHHHHHHCCCCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCC-------CCEEEEECCCCHHHHHHHHHHHH--
T ss_conf             99875204310133-344113568888634851999589980776227-------96599978999999999999998--


Q ss_pred             HHHHHHHHHHHHHHHHHCCH
Q ss_conf             31888999999899863014
Q gi|254780537|r  147 LDPSNAKKYELNAREYSEKI  166 (294)
Q Consensus       147 ~dP~~~~~y~~N~~~~~~~l  166 (294)
                      .+|+......+|+..+.++.
T Consensus       168 ~~~~~~~~~~~~a~~~~~~y  187 (188)
T 3c48_A          168 DDDETRIRMGEDAVEHARTF  187 (188)
T ss_dssp             HCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHC
T ss_conf             69999999999999999969


No 108
>>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3} (A:1-193)
Probab=25.96  E-value=40  Score=13.96  Aligned_cols=27  Identities=0%  Similarity=-0.091  Sum_probs=15.3

Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCH
Q ss_conf             899999997620169718998278997
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKFIFSESTNSD  245 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~if~e~~~~~  245 (294)
                      ..++.++.+.+|+.|+++|..-...++
T Consensus       104 t~~~~~~~~~ak~~g~~vi~iT~~~~s  130 (193)
T 3fj1_A          104 SPDIVAXTRNAGRDGALCVALTNDAAS  130 (193)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEESCTTS
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             748999999987759949998447998


No 109
>>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} (A:1-86,A:293-306)
Probab=25.78  E-value=41  Score=13.94  Aligned_cols=37  Identities=14%  Similarity=0.076  Sum_probs=31.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHH
Q ss_conf             6886400078999999976201697189982789979
Q gi|254780537|r  210 PINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQ  246 (294)
Q Consensus       210 ~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~  246 (294)
                      +.++|.+.|.+.-..+.+.+++.+..+.+.+......
T Consensus        11 G~SsE~evSl~Sa~~i~~aL~~~g~~v~~i~~~~~~~   47 (100)
T 1iow_A           11 GTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDV   47 (100)
T ss_dssp             CSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH
T ss_conf             6874228499999999999988699799988984118


No 110
>>1cb8_A Protein (chondroitinase AC); lyase, chondroitin degradation; HET: MAN RAM GCU MFU; 1.90A {Flavobacterium heparinum} (A:251-309)
Probab=25.60  E-value=41  Score=13.92  Aligned_cols=26  Identities=4%  Similarity=-0.004  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999864318889999998998630
Q gi|254780537|r  139 NIRKALTALDPSNAKKYELNAREYSE  164 (294)
Q Consensus       139 ~I~~~L~~~dP~~~~~y~~N~~~~~~  164 (294)
                      .....+.++||+|++.|+.-...+..
T Consensus        31 ~~l~r~~~iD~~h~~eY~~i~aR~~~   56 (59)
T 1cb8_A           31 KRLLVAKMIDLKHTEEWADAIARTDS   56 (59)
T ss_dssp             HHHHHHHHHCGGGHHHHHHHHHHHTT
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf             99998753392569999999975402


No 111
>>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCNACYLATION; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2vsn_A* (A:364-542)
Probab=25.37  E-value=41  Score=13.89  Aligned_cols=95  Identities=12%  Similarity=0.104  Sum_probs=46.5

Q ss_pred             HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             12457760378999988761068999997423557521112374202221001233463011122135678999999999
Q gi|254780537|r   64 SADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKA  143 (294)
Q Consensus        64 p~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~  143 (294)
                      ..-...++.||+++...  .+.+-..+++....+..+|....+.......++.  .+...+.. +.+.....+++.|...
T Consensus        82 ~~~~~~~~~adi~l~ps--~~~~~~~~~Ea~a~G~pvI~~~~~~~~e~i~~~~--~~~~~~~~-~~~~~~~~l~~~i~~l  156 (179)
T 2vsy_A           82 PQYLARYRHADLFLDTH--PYNAHTTASDALWTGCPVLTTPGETFAARVAGSL--NHHLGLDE-MNVADDAAFVAKAVAL  156 (179)
T ss_dssp             HHHHHHGGGCSEEECCS--SSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHH--HHHHTCGG-GBCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCEEEECC--CCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHH--HHHCCCCC-CCCCCHHHHHHHHHHH
T ss_conf             78999984585898698--9797287999997799989777898236489999--99779950-1459999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             8643188899999989986301
Q gi|254780537|r  144 LTALDPSNAKKYELNAREYSEK  165 (294)
Q Consensus       144 L~~~dP~~~~~y~~N~~~~~~~  165 (294)
                      +  .||+....+.+|+.++.++
T Consensus       157 ~--~~~~~~~~~~~~a~~~~~~  176 (179)
T 2vsy_A          157 A--SDPAALTALHARVDVLRRA  176 (179)
T ss_dssp             H--HCHHHHHHHHHHHHHHHHH
T ss_pred             H--CCHHHHHHHHHHHHHHHHH
T ss_conf             6--5999999999999998862


No 112
>>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} (A:194-372)
Probab=25.21  E-value=41  Score=13.87  Aligned_cols=65  Identities=12%  Similarity=0.179  Sum_probs=40.5

Q ss_pred             CCCCCEEEEECH--------HHHHHHHHHCCCEEEEEEEECCCCC--CCCCCCCHHHHHHHCCCCEEEEECCCCCHH
Q ss_conf             358828999752--------8999999851891489996268898--012022712457760378999988761068
Q gi|254780537|r   20 TTQKKVVLSSFS--------IIGDITQNIAKDLVTVTTLVEAGND--SHSYQVTSADAIKIQNADLILCNGLHLEET   86 (294)
Q Consensus        20 ~~~~~~Vv~s~~--------pl~~iv~~I~gd~v~V~~li~~g~d--pH~ye~tp~d~~~i~~Adliv~~G~~~E~~   86 (294)
                      .+++|.|++--.        -+-.+++..+=.-  +++....|.=  -|-+-..+.-...+.+||+|+..|..+..+
T Consensus        19 ~A~rPvIi~G~~~~~~~a~~~l~~lae~~giPv--~~~~~~kg~~p~~~p~~~g~~~~~~~~~aDlil~iG~~~~~~   93 (179)
T 2c31_A           19 NAKRPVIMLGKGAAYAQCDDEIRALVEETGIPF--LPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWL   93 (179)
T ss_dssp             TCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCE--EECGGGTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGG
T ss_pred             HCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE
T ss_conf             168958999623113447899988787418651--222012455664343221000132224551210236652000


No 113
>>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05913, PSI-2, protein structure initiative; 2.15A {Enterococcus faecalis V583} (A:1-225)
Probab=25.19  E-value=42  Score=13.87  Aligned_cols=22  Identities=23%  Similarity=0.208  Sum_probs=10.8

Q ss_pred             EEEECCCCCCCCCCCCHHHHHH
Q ss_conf             9962688980120227124577
Q gi|254780537|r   48 TTLVEAGNDSHSYQVTSADAIK   69 (294)
Q Consensus        48 ~~li~~g~dpH~ye~tp~d~~~   69 (294)
                      +||.-|..|+..|...-+++-+
T Consensus        36 TSL~i~e~~~~~~~~~~~~l~~   57 (225)
T 2p0o_A           36 TSLHIPEDDTSLYRQRLTDLGA   57 (225)
T ss_dssp             EEECCC-----CHHHHHHHHHH
T ss_pred             ECCCCCCCCHHHHHHHHHHHHH
T ss_conf             0477268887899999999999


No 114
>>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} (A:)
Probab=25.09  E-value=42  Score=13.85  Aligned_cols=72  Identities=11%  Similarity=0.132  Sum_probs=49.3

Q ss_pred             HHHHHHHCCCC--CCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEE
Q ss_conf             89988630784--47369982665214577529728872268864000789999999762016-----------971899
Q gi|254780537|r  172 PLKTRIEKVDP--EKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIF  238 (294)
Q Consensus       172 ~~~~~~~~~p~--~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if  238 (294)
                      .++..+..++.  .++.+++|.|.|               .+..+..+|+.++.++.+.|++.           +++. +
T Consensus       147 ql~~~l~~v~~~~~~~~vIAYEPvw---------------AIGtg~~as~~~i~~v~~~Ir~~~~~~~~~~~~~~v~i-l  210 (255)
T 1b9b_A          147 QVREGFYGLDKEEAKRVVIAYEPVW---------------AIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRI-L  210 (255)
T ss_dssp             HHHHHHTTCCHHHHTTCEEEECCGG---------------GSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEE-E
T ss_pred             HHHHHHCCCCCCCCCCEEEECCCEE---------------CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE-E
T ss_conf             9876520343002135489647421---------------14666676557777777888888887517000476428-9


Q ss_pred             EECCCCHHHHHHHHHHHCCCE
Q ss_conf             827899799999999829934
Q gi|254780537|r  239 SESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       239 ~e~~~~~~~~~~ia~e~~~~~  259 (294)
                      +....++.-+..++...++.-
T Consensus       211 YGGSV~~~N~~~l~~~~~vDG  231 (255)
T 1b9b_A          211 YGGSIKPDNFLGLIVQKDIDG  231 (255)
T ss_dssp             EESSCCHHHHTTTSSSTTCCE
T ss_pred             ECCCCCHHHHHHHHCCCCCCE
T ss_conf             728989889999956779997


No 115
>>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Bacillus brevis} (A:67-173)
Probab=25.02  E-value=42  Score=13.85  Aligned_cols=77  Identities=8%  Similarity=0.037  Sum_probs=44.6

Q ss_pred             HHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEEC--CCCCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             98630145533789988630784473699826652145775297288722--6886400078999999976201697189
Q gi|254780537|r  160 REYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLW--PINSDSERSPSMMRHAINQMRSHKIKFI  237 (294)
Q Consensus       160 ~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~--~~~~~~eps~~~l~~~~~~ik~~~v~~i  237 (294)
                      +++..+...+-..++..  .+..+++..+-..+...|+.-.+|+-..+..  .+++  ..++.++..   .++..+.+++
T Consensus         2 ~el~~~~~~la~~L~~~--Gi~~g~~V~i~~~n~~~~~~~~~a~~~~G~~~v~i~~--~~~~~~l~~---~l~~~~~~~i   74 (107)
T 1amu_A            2 HELNVKANQLARIFIEK--GIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDI--EYPKERIQY---ILDDSQARML   74 (107)
T ss_dssp             HHHHHHHHHHHHHHHHT--TCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCT--TSCHHHHHH---HHHHHTCSEE
T ss_pred             HHHHHHHHHHHHHHHHC--CCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECC--CCCHHHHHH---HHHHCCCCEE
T ss_conf             99999999999999974--9688499999938989999999999986969998689--899999999---9974487468


Q ss_pred             EEECCC
Q ss_conf             982789
Q gi|254780537|r  238 FSESTN  243 (294)
Q Consensus       238 f~e~~~  243 (294)
                      |++...
T Consensus        75 i~~~~~   80 (107)
T 1amu_A           75 LTQKHL   80 (107)
T ss_dssp             EECGGG
T ss_pred             EEHHHH
T ss_conf             611556


No 116
>>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, transferase; HET: GLC PLP; 1.80A {Escherichia coli} (A:456-777)
Probab=24.85  E-value=42  Score=13.82  Aligned_cols=78  Identities=13%  Similarity=-0.024  Sum_probs=46.8

Q ss_pred             HHHHH-HCCCCEEEEECC-CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             24577-603789999887-6106899999742355752111237420222100123346301112213567899999999
Q gi|254780537|r   65 ADAIK-IQNADLILCNGL-HLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRK  142 (294)
Q Consensus        65 ~d~~~-i~~Adliv~~G~-~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~  142 (294)
                      .++.. ++.+|+++.... .+|++-.-.++....+..+|....|.......+... +++  -.+-.+|.+...+++.|..
T Consensus       161 ~~~~~~~~~~Di~v~PS~~~~E~fG~v~lEAM~~G~pvvat~~GG~~E~V~~~~~-~~g--tg~~~~~~~~~~l~~~i~~  237 (322)
T 1l5w_A          161 SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGE-ENI--FIFGHTVEQVKAILAKGYD  237 (322)
T ss_dssp             HHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCG-GGS--EECSCCHHHHHHHHHHCCC
T ss_pred             HHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCE--EEECCCHHHHHHHHHCCCC
T ss_conf             9999873511154408999745577347799976970660466448998885373-436--8835866778888754888


Q ss_pred             HHH
Q ss_conf             986
Q gi|254780537|r  143 ALT  145 (294)
Q Consensus       143 ~L~  145 (294)
                      .+.
T Consensus       238 ~l~  240 (322)
T 1l5w_A          238 PVK  240 (322)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             688


No 117
>>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} (A:1-129)
Probab=24.25  E-value=43  Score=13.75  Aligned_cols=45  Identities=7%  Similarity=0.013  Sum_probs=34.8

Q ss_pred             CCHHHHHHHHHHHCCCCCEEE-EEECCCCHHHHHHHHHHHCCCEEE
Q ss_conf             078999999976201697189-982789979999999982993444
Q gi|254780537|r  217 RSPSMMRHAINQMRSHKIKFI-FSESTNSDQPAKQVAYETNASYGG  261 (294)
Q Consensus       217 ps~~~l~~~~~~ik~~~v~~i-f~e~~~~~~~~~~ia~e~~~~~~~  261 (294)
                      .++.+..+..+.+-+.+++|| |+.....+..+-.++++.|+++..
T Consensus        64 l~~~~~~~~~~~~~~~~~~~iiit~~~~~~~~i~~~a~~~~iPil~  109 (129)
T 1ko7_A           64 LPDEERKGRMRKLCRPETPAIIVTRDLEPPEELIEAAKEHETPLIT  109 (129)
T ss_dssp             SCHHHHTTHHHHHCCTTCCCEEECTTCCCCHHHHHHHHHTTCCEEE
T ss_pred             CCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEE
T ss_conf             8999999999997367998899979999989999999981983998


No 118
>>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid binding, structural genomics; HET: Z99 NAG; 1.90A {Homo sapiens} PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* (A:181-319,A:446-496)
Probab=23.97  E-value=44  Score=13.72  Aligned_cols=46  Identities=15%  Similarity=-0.062  Sum_probs=25.8

Q ss_pred             HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             1457752972887226886400078999999976201697189982
Q gi|254780537|r  195 VYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSE  240 (294)
Q Consensus       195 ~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e  240 (294)
                      .-.++..|+.+.....+......+..+.......+++.+.++|+.-
T Consensus        38 ~~~~~~~gi~I~~~~~~~~~~~~~~~d~~~~l~~i~~~~a~vVv~~   83 (190)
T 3ks9_A           38 KELAAQEGLSIAHSDKIYSNAGEKSFDRLLRKLRERLPKARVVVCF   83 (190)
T ss_dssp             HHHHHHTTCEEEEEEEECTTCCHHHHHHHHHHHHTTTTTTCEEEEE
T ss_pred             HHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             9999975987999998268998789999999988740264279998


No 119
>>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} (A:184-348)
Probab=23.93  E-value=44  Score=13.71  Aligned_cols=82  Identities=11%  Similarity=0.147  Sum_probs=41.2

Q ss_pred             CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECCCCCCCCCC----------CCHHHHHHHCCCCEEEEECC
Q ss_conf             35882899975--------2899999985189148999626889801202----------27124577603789999887
Q gi|254780537|r   20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEAGNDSHSYQ----------VTSADAIKIQNADLILCNGL   81 (294)
Q Consensus        20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye----------~tp~d~~~i~~Adliv~~G~   81 (294)
                      .+++|.|++--        ..+..+++.++-.-  +++....+.=|++..          -++.-...+++||+++..|.
T Consensus        25 ~A~rP~ii~G~~~~~~~a~~~l~~lae~~g~pv--~~t~~~k~~~~~~hp~~~G~~~g~~~~~~~~~~~~~aDlil~iG~  102 (165)
T 2vbi_A           25 KSASPVMLLGSKLRAANALAATETLADKLQCAV--TIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAP  102 (165)
T ss_dssp             TCSCEEEEECTTTTTTTCHHHHHHHHHHHCCEE--EEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHHHHTCSEEEEESC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE--EECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             623245323222333322223222124321035--530234546875465345640003446433222124411333465


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             6106899999742355752111
Q gi|254780537|r   82 HLEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        82 ~~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      .+..+.........+..++|.+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~I~i  124 (165)
T 2vbi_A          103 VFNDYSTVGWSAWPKGPNVILA  124 (165)
T ss_dssp             CCBTTTTTTTTSCCCSTTEEEE
T ss_pred             CCCCCCCCHHCCCCCCCCCEEE
T ss_conf             4443321000013677531342


No 120
>>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae} (A:28-260)
Probab=23.66  E-value=44  Score=13.68  Aligned_cols=128  Identities=5%  Similarity=-0.071  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHCCCCCCCEEEE--ECCCCHHHHHHCC
Q ss_conf             35678999999999864318889999998998630145-----5337899886307844736998--2665214577529
Q gi|254780537|r  130 LTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIR-----NSILPLKTRIEKVDPEKRWFVT--SEGCLVYLAEDFG  202 (294)
Q Consensus       130 p~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~-----~l~~~~~~~~~~~p~~~~~~v~--~H~af~Y~~~~yG  202 (294)
                      |+-...+.+.+......-....-+.+++....|...=.     .-...+...+..+...+..++.  .|+.+....+.+|
T Consensus         5 ~~v~~a~~~~~~~~~~~~~~~~~~~l~~~ia~~~g~e~~i~~~sgt~a~~~al~~l~~~~~vi~~~~~~~~~~~~~~~~g   84 (233)
T 2po3_A            5 ARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATPHALRWIG   84 (233)
T ss_dssp             HHHHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHTCCSEEEEESSSCTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCEEECCHHHHHHHH
T ss_conf             99999999999669867899789999999999978396999667899999999975998979984222405556765311


Q ss_pred             CEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC---CCCHHHHHHHHHHHCCCEE
Q ss_conf             728872268864000789999999762016971899827---8997999999998299344
Q gi|254780537|r  203 FKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSES---TNSDQPAKQVAYETNASYG  260 (294)
Q Consensus       203 l~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~---~~~~~~~~~ia~e~~~~~~  260 (294)
                      .+.+.+.--..+..+.   +.++.+.+++......+..+   ..+-+.+..++++.|+.+.
T Consensus        85 ~~~~~~~~~~~~~~~~---~e~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~a~~~g~~li  142 (233)
T 2po3_A           85 LTPVFADIDPDTGNLD---PDQVAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRLY  142 (233)
T ss_dssp             CEEEEECBCTTTSSBC---HHHHGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHTTCEEE
T ss_pred             CCCCCCCCCCCCCCCC---HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf             1200134333323578---777402001133333231356865333300112211572400


No 121
>>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} (A:93-172)
Probab=23.49  E-value=45  Score=13.66  Aligned_cols=56  Identities=14%  Similarity=0.227  Sum_probs=36.5

Q ss_pred             CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCH--HHHHHHHHHHC
Q ss_conf             52145775297288722688640007899999997620169718998278997--99999999829
Q gi|254780537|r  193 CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSD--QPAKQVAYETN  256 (294)
Q Consensus       193 af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~--~~~~~ia~e~~  256 (294)
                      ++.|+++.+|++...+..   +. .++    .-++.++..+..++.++.....  +.++.++++.+
T Consensus        15 alA~~a~~~Gi~~~i~~p---~~-~~~----~k~~~l~~~GA~V~~~~~~~~~~~~~a~~~a~e~~   72 (80)
T 1p5j_A           15 AAAYAARQLGVPATIVVP---GT-TPA----LTIERLKNEGATCKVVGELLDEAFELAKALAKNNP   72 (80)
T ss_dssp             HHHHHHHHHTCCEEEEEC---TT-CCH----HHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHHST
T ss_pred             HHHHHHHHCCCCCEEECC---CC-CCH----HHEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf             999999985998342026---88-844----53112345742899831221046778899986268


No 122
>>2o2z_A Hypothetical protein; NP_244435.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A (A:)
Probab=23.28  E-value=43  Score=13.74  Aligned_cols=37  Identities=14%  Similarity=0.187  Sum_probs=20.0

Q ss_pred             HHHHHHHHCCCEEEEEEEECCCCCC--------CCCCCCHHHHHH
Q ss_conf             9999998518914899962688980--------120227124577
Q gi|254780537|r   33 IGDITQNIAKDLVTVTTLVEAGNDS--------HSYQVTSADAIK   69 (294)
Q Consensus        33 l~~iv~~I~gd~v~V~~li~~g~dp--------H~ye~tp~d~~~   69 (294)
                      +..+.+.+..=..+++.+++.+.|-        +..-|-|-|++.
T Consensus        16 ~~~ll~gl~~~~~~it~IV~v~DdGGSsg~Lr~~~g~~~~gDir~   60 (323)
T 2o2z_A           16 LSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRN   60 (323)
T ss_dssp             HHHHHHHHTTSSEEEEEEECCCCCSHHHHHHHHHHTSCCCHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCCCEEHHHHCCCCCHHHHHH
T ss_conf             899999997489984999988528834312764169998179999


No 123
>>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} (A:261-394)
Probab=22.72  E-value=46  Score=13.56  Aligned_cols=67  Identities=9%  Similarity=0.045  Sum_probs=49.8

Q ss_pred             HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC-EEEEEECCCCHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             57752972887226886400078999999976201697-18998278997999999998299344432012
Q gi|254780537|r  197 LAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKI-KFIFSESTNSDQPAKQVAYETNASYGGVLYVD  266 (294)
Q Consensus       197 ~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v-~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d  266 (294)
                      .+++||+..-.-..   ..-.+|+++.++.+..++.++ +++++--+.+..+.-.++..+..|++.+....
T Consensus        27 ~L~~~gi~~~~~V~---SaHR~p~~~~~~~~~~~~~~~~~viI~~AG~sa~Lpgvia~~t~~PVIgvP~~~   94 (134)
T 2h31_A           27 ACGNFGIPCELRVT---SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVXSGNTAYPVISCPPLT   94 (134)
T ss_dssp             HHHHTTCCEEEEEC---CTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHHHHHCSSCEEECCCCC
T ss_pred             HHHHCCCCEEEEEE---ECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHEECCCCCCEEECCCCC
T ss_conf             99866775489998---467698999999999987699789999476322445550004789979806876


No 124
>>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, thioredoxin fold, structural genomics, PSI- 2; HET: MSE; 1.50A {Staphylococcus aureus subsp} (A:)
Probab=22.69  E-value=46  Score=13.55  Aligned_cols=46  Identities=9%  Similarity=-0.013  Sum_probs=41.1

Q ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCE
Q ss_conf             4000789999999762016971899827899799999999829934
Q gi|254780537|r  214 DSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       214 ~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~  259 (294)
                      .-..|..-+.++.+++.++++++.|..-+....+-+.||+.+|++-
T Consensus        35 tC~IS~~a~~efe~~~~~~~~~~yyL~v~~~R~vSn~IAe~~~V~H   80 (112)
T 3iv4_A           35 TCPISANAYDQFNKFLYERDXDGYYLIVQQERDLSDYIAKKTNVKH   80 (112)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCC
T ss_conf             8740499999998642235687799984106557899999959966


No 125
>>1vq8_P 50S ribosomal protein L19E; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} (P:1-57)
Probab=22.62  E-value=21  Score=15.92  Aligned_cols=20  Identities=10%  Similarity=0.189  Sum_probs=14.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             11221356789999999998
Q gi|254780537|r  125 HAWMSLTNAMIYIENIRKAL  144 (294)
Q Consensus       125 H~Wldp~~~~~~a~~I~~~L  144 (294)
                      -+|+||+....++++++..-
T Consensus        21 rVWlDP~~~~eI~~A~sR~~   40 (57)
T 1vq8_P           21 RVWFNPERQGDIADAITRED   40 (57)
T ss_dssp             GEEECGGGHHHHHHCCSHHH
T ss_pred             EEEECCHHHHHHHHHHHHHH
T ss_conf             06628067779998762999


No 126
>>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} (A:43-148)
Probab=22.61  E-value=46  Score=13.54  Aligned_cols=66  Identities=14%  Similarity=0.231  Sum_probs=39.3

Q ss_pred             CCCEEEEECC-----CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCH----HHHHHHHH
Q ss_conf             4736998266-----52145775297288722688640007899999997620169718998278997----99999999
Q gi|254780537|r  183 EKRWFVTSEG-----CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSD----QPAKQVAY  253 (294)
Q Consensus       183 ~~~~~v~~H~-----af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~----~~~~~ia~  253 (294)
                      ..+.+++...     ++.|.++.+|++...+..   +. .+    .+-++.++..|..+++++...+-    ..++.+++
T Consensus        24 g~~~iv~~SsGN~g~alA~~a~~~g~~~~iv~p---~~-~~----~~k~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~   95 (106)
T 1z7w_A           24 GESVLIEPTSGNTGVGLAFTAAAKGYKLIITMP---AS-MS----TERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA   95 (106)
T ss_dssp             TTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEE---TT-SC----HHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE---EC-CC----HHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf             984699746760778999999862684599640---02-30----45543321378607985034443321056888874


Q ss_pred             HHC
Q ss_conf             829
Q gi|254780537|r  254 ETN  256 (294)
Q Consensus       254 e~~  256 (294)
                      +.+
T Consensus        96 ~~~   98 (106)
T 1z7w_A           96 KTP   98 (106)
T ss_dssp             HCT
T ss_pred             CCC
T ss_conf             179


No 127
>>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni} (A:)
Probab=22.46  E-value=47  Score=13.52  Aligned_cols=78  Identities=14%  Similarity=0.177  Sum_probs=37.8

Q ss_pred             CCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             89801202271245776037899998876106899999742355752111237420222100123346301112213567
Q gi|254780537|r   54 GNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNA  133 (294)
Q Consensus        54 g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~  133 (294)
                      |.|+..+.+.+=+...+.++|+||......-..+.+.....  ..++..+.+...      +.......||+..-+...+
T Consensus        63 Gid~s~~~sr~l~~~~~~~~DlIi~m~~~~~~~l~~~~p~~--~~~v~~l~~~~~------~~~~~di~DP~~~~~f~~~  134 (156)
T 2gi4_A           63 NIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTNT--QNKVLKITDFSP------SLNYDEVPDPWYSGNFDET  134 (156)
T ss_dssp             SCSCCCCCCCBCCHHHHTTCSEEECCCHHHHHHHHHHSCGG--GGGEECTTTTCS------SCCCCSSCHHHHTSCSHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC--CCEEEECCCCCC------CCCCCCCCCCCCCCHHHHH
T ss_conf             34432001101078888860200322377778775330242--011763102065------4589948899998879999


Q ss_pred             HHHHHH
Q ss_conf             899999
Q gi|254780537|r  134 MIYIEN  139 (294)
Q Consensus       134 ~~~a~~  139 (294)
                      ....+.
T Consensus       135 ~~~i~~  140 (156)
T 2gi4_A          135 YKILSL  140 (156)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999999


No 128
>>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA- directed RNA polymerase, primosome, late protein; HET: DNA; 2.90A {Enterobacteria phage T7} (A:138-255)
Probab=22.40  E-value=47  Score=13.51  Aligned_cols=104  Identities=9%  Similarity=0.037  Sum_probs=59.9

Q ss_pred             CCCEEEEECCCCHHHH-HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC-CHHHHHHHHHHHCCCEE
Q ss_conf             4736998266521457-752972887226886400078999999976201697189982789-97999999998299344
Q gi|254780537|r  183 EKRWFVTSEGCLVYLA-EDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTN-SDQPAKQVAYETNASYG  260 (294)
Q Consensus       183 ~~~~~v~~H~af~Y~~-~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~-~~~~~~~ia~e~~~~~~  260 (294)
                      +...++.....+.-++ ...|++.........+...+++.+..+.+....-+--+|..+.-. ..+.++.+++..+..-.
T Consensus        12 ~~~~v~i~EG~~Dals~~~~g~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~iii~~DnD~aG~~~~~~~~~~l~~~~~   91 (118)
T 1nui_A           12 GGKKIVVTEGEIDMLTVMELQDCKYPVVSLGHGASAAKKTCAANYEYFDQFEQIILMFDMDEAGRKAVEEAAQVLPAGKV   91 (118)
T ss_dssp             CBSCCEEESSHHHHHHHHHHHTTCSCEECCTTTTTTHHHHHHHTHHHHTTBSCEEEECCSSHHHHHHHHHHHHHSCTTTE
T ss_pred             CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCE
T ss_conf             87669997881369999998426886543676301214677888887436775999778998999999999987577879


Q ss_pred             EEEECCCCCCCCCCCCCHHHHH-HHHHHHHHHHCC
Q ss_conf             4320123787778868999999-999999986209
Q gi|254780537|r  261 GVLYVDSLSKPDGPAPTYLDLL-RFSLTKIVDTLF  294 (294)
Q Consensus       261 ~~~~~d~l~~~~~~~~~Y~~~m-~~N~~~l~~aL~  294 (294)
                      .+..        .++.++-++. ....+.+.+.||
T Consensus        92 ~~~~--------p~~kD~nd~l~~~g~~~~~~~i~  118 (118)
T 1nui_A           92 RVAV--------LPCKDANECHLNGHDREIMEQVW  118 (118)
T ss_dssp             EECC--------CSSSSHHHHHTTTTHHHHHHHHC
T ss_pred             EEEE--------CCCCCHHHHHHCCCHHHHHHHHC
T ss_conf             9950--------89879899988199999999759


No 129
>>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} (A:259-455)
Probab=22.31  E-value=47  Score=13.50  Aligned_cols=63  Identities=27%  Similarity=0.428  Sum_probs=35.3

Q ss_pred             CCCCCEEEEECHH---------HHHHHHHHCCCEEEEEE-EECCCC----CCCCC-----CCCHHHHHHHCCCCEEEEEC
Q ss_conf             3588289997528---------99999985189148999-626889----80120-----22712457760378999988
Q gi|254780537|r   20 TTQKKVVLSSFSI---------IGDITQNIAKDLVTVTT-LVEAGN----DSHSY-----QVTSADAIKIQNADLILCNG   80 (294)
Q Consensus        20 ~~~~~~Vv~s~~p---------l~~iv~~I~gd~v~V~~-li~~g~----dpH~y-----e~tp~d~~~i~~Adliv~~G   80 (294)
                      .+++|.|++-...         +..+++..+-.   |.+ ....|.    +|+..     --++.-...+++||++|..|
T Consensus        30 ~A~rPvii~G~~~~~~~~a~~~l~~lae~~~ip---v~~t~~~kg~~~~~~p~~~G~~G~~~~~~~~~~i~~aDlil~iG  106 (197)
T 1t9b_A           30 LAKKPVLYVGAGILNHADGPRLLKELSDRAQIP---VTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVG  106 (197)
T ss_dssp             TCSSEEEEECGGGGGSTTHHHHHHHHHHHTTCC---EEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEES
T ss_pred             HCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCC---EEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCEEEEEC
T ss_conf             377987983266430046899999998721412---79866667766875640122145423588998771599899989


Q ss_pred             CCCCH
Q ss_conf             76106
Q gi|254780537|r   81 LHLEE   85 (294)
Q Consensus        81 ~~~E~   85 (294)
                      ..+..
T Consensus       107 ~~~~~  111 (197)
T 1t9b_A          107 ARFDD  111 (197)
T ss_dssp             CCCCT
T ss_pred             CCCCC
T ss_conf             97774


No 130
>>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} (A:450-608)
Probab=22.28  E-value=47  Score=13.50  Aligned_cols=34  Identities=0%  Similarity=-0.105  Sum_probs=13.0

Q ss_pred             HHHCCCCCEEEEEECCCCHH-HH--HHHHHHHCCCEE
Q ss_conf             76201697189982789979-99--999998299344
Q gi|254780537|r  227 NQMRSHKIKFIFSESTNSDQ-PA--KQVAYETNASYG  260 (294)
Q Consensus       227 ~~ik~~~v~~if~e~~~~~~-~~--~~ia~e~~~~~~  260 (294)
                      ..+.++.+-.+|..+..+.. ..  -..+++.|++++
T Consensus        59 ~~~~~~d~vi~is~~g~~~e~~~~~~~~ak~~g~~vi   95 (159)
T 2bpl_A           59 ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLY   95 (159)
T ss_dssp             GGCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEE
T ss_pred             HHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf             6607997099997797369999999999996699599


No 131
>>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; NP_391141.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis} (A:1-155)
Probab=22.01  E-value=48  Score=13.46  Aligned_cols=27  Identities=11%  Similarity=-0.087  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCH
Q ss_conf             899999997620169718998278997
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKFIFSESTNSD  245 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~if~e~~~~~  245 (294)
                      ..++.++.+.+|++++++|..-...++
T Consensus        87 t~~~~~~~~~a~~~g~~~I~iT~~~~s  113 (155)
T 3eua_A           87 TPETVKAAAFARGKGALTIAXTFKPES  113 (155)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEESCTTS
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             867999998655302213321276321


No 132
>>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} (A:91-179)
Probab=21.90  E-value=48  Score=13.45  Aligned_cols=67  Identities=12%  Similarity=0.009  Sum_probs=45.2

Q ss_pred             CCCEEEEECCCC----HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf             473699826652----1457752972887226886400078999999976201697189982789979999999982993
Q gi|254780537|r  183 EKRWFVTSEGCL----VYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNAS  258 (294)
Q Consensus       183 ~~~~~v~~H~af----~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~  258 (294)
                      .++.-++.++..    .-+.+-+|++..-..      --++.++.+.++.+++.|+++|.     .+..+..+|++.|.+
T Consensus        16 ~~kiaivgf~~~~~~~~~~~~ll~~~i~~~~------~~~~~e~~~~i~~l~~~G~~vVI-----G~~~~~~~A~~~Gl~   84 (89)
T 2pju_A           16 TSSIGVVTYQETIPALVAFQKTFNLRLDQRS------YITEEDARGQINELKANGTEAVV-----GAGLITDLAEEAGMT   84 (89)
T ss_dssp             TSCEEEEEESSCCHHHHHHHHHHTCCEEEEE------ESSHHHHHHHHHHHHHTTCCEEE-----ESHHHHHHHHHTTSE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCCCEEEEE------ECCHHHHHHHHHHHHHCCCCEEE-----CCHHHHHHHHHCCCC
T ss_conf             8978999377514699999999599449999------65889999999999986997999-----986999999984997


Q ss_pred             EE
Q ss_conf             44
Q gi|254780537|r  259 YG  260 (294)
Q Consensus       259 ~~  260 (294)
                      .+
T Consensus        85 ~v   86 (89)
T 2pju_A           85 GI   86 (89)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             89


No 133
>>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} (A:79-168)
Probab=21.54  E-value=49  Score=13.40  Aligned_cols=66  Identities=12%  Similarity=0.070  Sum_probs=44.6

Q ss_pred             CCEEEEECC----CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCE
Q ss_conf             736998266----5214577529728872268864000789999999762016971899827899799999999829934
Q gi|254780537|r  184 KRWFVTSEG----CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       184 ~~~~v~~H~----af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~  259 (294)
                      ++.-++.++    .+..+++-+|++..-..-      -++.++.+.++.+++.|+++|.     .+..+..+|++.|.+.
T Consensus        17 ~kiaivgf~~~~~~~~~~~~ll~~~i~~~~~------~~~~e~~~~i~~l~~~G~~vVI-----G~~~~~~~A~~~Gl~~   85 (90)
T 2q5c_A           17 NELALIAYKHSIVDKHEIEAMLGVKIKEFLF------SSEDEITTLISKVKTENIKIVV-----SGKTVTDEAIKQGLYG   85 (90)
T ss_dssp             SEEEEEEESSCSSCHHHHHHHHTCEEEEEEE------CSGGGHHHHHHHHHHTTCCEEE-----ECHHHHHHHHHTTCEE
T ss_pred             CCEEEEECCCCCHHHHHHHHHHCCCEEEEEE------CCHHHHHHHHHHHHHCCCCEEE-----CCHHHHHHHHHCCCCE
T ss_conf             9789995786136899999995994599996------5889999999999986997999-----9879999999849968


Q ss_pred             E
Q ss_conf             4
Q gi|254780537|r  260 G  260 (294)
Q Consensus       260 ~  260 (294)
                      +
T Consensus        86 v   86 (90)
T 2q5c_A           86 E   86 (90)
T ss_dssp             E
T ss_pred             E
T ss_conf             9


No 134
>>2z4t_A Beta-galactoside alpha-2,6-sialyltransferase; GT-B fold, immunoglobulin-like beta-sandwich fold, glycosyltransferase; HET: LBT C5P; 2.50A {Photobacterium SP} (A:1-111)
Probab=21.37  E-value=33  Score=14.54  Aligned_cols=57  Identities=14%  Similarity=0.299  Sum_probs=25.6

Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHC-CCEEEEEEEECCC--CCCCCCCCC
Q ss_conf             92699999999986046433588289997528999999851-8914899962688--980120227
Q gi|254780537|r    1 MLRYFICLLFSYIPMSASATTQKKVVLSSFSIIGDITQNIA-KDLVTVTTLVEAG--NDSHSYQVT   63 (294)
Q Consensus         1 M~r~~~~l~~~~~~~~~~~~~~~~~Vv~s~~pl~~iv~~I~-gd~v~V~~li~~g--~dpH~ye~t   63 (294)
                      |||++++.++++..|......-+-.|+-++.      ..|. .+.++++.|=.++  -+.|+|+-+
T Consensus         1 MK~fllls~ilLsACN~~~~nt~~~v~s~in------~~vie~etyql~PId~~~~sF~shSW~QT   60 (111)
T 2z4t_A            1 MKNFLLLTLILLTACNNSEENTQSIIKNDIN------KTIIDEEYVNLEPINQSNISFTKHSWVQT   60 (111)
T ss_dssp             ---------------------CCCCEEEEEE------EEEETTCEEEECSCCSSSCCEEEEEEEEE
T ss_pred             CCCEEEHHHHHHHHHCCCCHHHHHHHHCCCC------CCCCCCCEEEEEECCCCCCCCHHHHHHHH
T ss_conf             9615304889998706972115778651554------22002532543455889865101027664


No 135
>>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* (A:183-372)
Probab=21.21  E-value=49  Score=13.36  Aligned_cols=81  Identities=19%  Similarity=0.215  Sum_probs=43.4

Q ss_pred             CCCCCEEEEECHH--------HHHHHHHHCCCEEEEEEEECCC----CCCCCCC-----CCHHHHHHHCCCCEEEEECCC
Q ss_conf             3588289997528--------9999998518914899962688----9801202-----271245776037899998876
Q gi|254780537|r   20 TTQKKVVLSSFSI--------IGDITQNIAKDLVTVTTLVEAG----NDSHSYQ-----VTSADAIKIQNADLILCNGLH   82 (294)
Q Consensus        20 ~~~~~~Vv~s~~p--------l~~iv~~I~gd~v~V~~li~~g----~dpH~ye-----~tp~d~~~i~~Adliv~~G~~   82 (294)
                      .+++|.|++-...        +..+++..+-..  +++.+..|    .+||..-     -.+.-...+.+||+++..|..
T Consensus        22 ~A~rPvii~G~~~~~~~a~~~l~~lae~~~iPv--~~t~~~kg~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlil~iG~~   99 (190)
T 2pgn_A           22 AAKNPVILAGGGVARSGGSEALLKLAEMVGVPV--VTTSTGAGVFPETHALAMGSAGFCGWKSANDMMAAADFVLVLGSR   99 (190)
T ss_dssp             HCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCE--EECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCC
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEE--EECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
T ss_conf             234333345653123443899999999829747--623557865541333022456765514566665402220013443


Q ss_pred             CCHHHHHHHHHCCCCCCCCCC
Q ss_conf             106899999742355752111
Q gi|254780537|r   83 LEETYMKYFTNLKKGTKIITV  103 (294)
Q Consensus        83 ~E~~~~~~~~~~~~~~~~i~~  103 (294)
                      +..+.... .....+.++|.+
T Consensus       100 ~~~~~~~~-~~~~~~~~~i~i  119 (190)
T 2pgn_A          100 LSDWGIAQ-GYITKMPKFVHV  119 (190)
T ss_dssp             CCTTTTTT-TTTCCCCSEEEE
T ss_pred             CCCCCCCC-CCCCCCCCEEEC
T ss_conf             34455300-112356421210


No 136
>>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} (A:122-254,A:330-346)
Probab=21.02  E-value=50  Score=13.33  Aligned_cols=78  Identities=13%  Similarity=0.133  Sum_probs=43.5

Q ss_pred             HCCCCCCCEEEEECCCCH--------HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCC--HHH
Q ss_conf             307844736998266521--------4577529728872268864000789999999762016971899827899--799
Q gi|254780537|r  178 EKVDPEKRWFVTSEGCLV--------YLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNS--DQP  247 (294)
Q Consensus       178 ~~~p~~~~~~v~~H~af~--------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~--~~~  247 (294)
                      ...+.++..++..-+.|+        =..++.|++++.....    .++..++..++..|++.+..+|+.-....  ...
T Consensus        13 ~~~~~k~vaii~~d~~~G~~~~~~~~~~l~~~G~~vv~~~~~----~~~~~d~~~~i~~i~~~~~d~Ii~~~~~~~~~~~   88 (150)
T 1usg_A           13 ETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI----TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM   88 (150)
T ss_dssp             HTTCCSSEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEEC----CTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC----CCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHE
T ss_conf             024552036741652012567877655441344227888733----6211101368888875387469997444344321


Q ss_pred             HHHHHHHHCCCEE
Q ss_conf             9999998299344
Q gi|254780537|r  248 AKQVAYETNASYG  260 (294)
Q Consensus       248 ~~~ia~e~~~~~~  260 (294)
                      ++. +++.|.+..
T Consensus        89 ~~~-~~~~g~~~~  100 (150)
T 1usg_A           89 LRQ-ARSVGLKTQ  100 (150)
T ss_dssp             HHH-HHHTTCCCE
T ss_pred             EEE-CCCCCCCCE
T ss_conf             410-122355630


No 137
>>2zkr_p 60S ribosomal protein L19; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} (p:1-57)
Probab=20.87  E-value=19  Score=16.22  Aligned_cols=20  Identities=5%  Similarity=0.169  Sum_probs=14.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             11221356789999999998
Q gi|254780537|r  125 HAWMSLTNAMIYIENIRKAL  144 (294)
Q Consensus       125 H~Wldp~~~~~~a~~I~~~L  144 (294)
                      -+|+||+....++.+++..-
T Consensus        21 rVWlDP~e~~eI~~A~sR~~   40 (57)
T 2zkr_p           21 KVWLDPNETNEIANANSRQQ   40 (57)
T ss_dssp             GEEECSTTHHHHHHCCSHHH
T ss_pred             CEECCHHHHHHHHHHHHHHH
T ss_conf             14508277779998766999


No 138
>>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} (A:183-361,A:548-590)
Probab=20.73  E-value=51  Score=13.29  Aligned_cols=65  Identities=14%  Similarity=0.166  Sum_probs=39.5

Q ss_pred             CCCCCEEEEECHH------HHHHHHHHCCCEEEEEEEECCCC----CCCCCCC-----CHHHHHHHCCCCEEEEECCCCC
Q ss_conf             3588289997528------99999985189148999626889----8012022-----7124577603789999887610
Q gi|254780537|r   20 TTQKKVVLSSFSI------IGDITQNIAKDLVTVTTLVEAGN----DSHSYQV-----TSADAIKIQNADLILCNGLHLE   84 (294)
Q Consensus        20 ~~~~~~Vv~s~~p------l~~iv~~I~gd~v~V~~li~~g~----dpH~ye~-----tp~d~~~i~~Adliv~~G~~~E   84 (294)
                      .+.+|.|++--..      +..++++.+-..  +++....|.    +|+..=-     ++.-...|.+||+++..|..+-
T Consensus        22 ~AkrPvIivG~g~~~a~~~l~~la~~~g~PV--~~t~~~kg~~~e~hp~~~G~~G~~~~~~~~~~l~~aDlVL~vG~~l~   99 (222)
T 1v5e_A           22 NSKRPVIYAGIGTMGHGPAVQELARKIKAPV--ITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFP   99 (222)
T ss_dssp             HCSSEEEEECGGGTTCHHHHHHHHHHHTCCE--EECTTCGGGSCTTCTTEEEESSSSSCHHHHHHHHHCSEEEEESCCCT
T ss_pred             HCCCCEEEEECCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCHHCCCCCCC
T ss_conf             5789889984001003799998765302322--22222334332332100002234676112334322010000234566


Q ss_pred             HH
Q ss_conf             68
Q gi|254780537|r   85 ET   86 (294)
Q Consensus        85 ~~   86 (294)
                      .+
T Consensus       100 ~~  101 (222)
T 1v5e_A          100 FS  101 (222)
T ss_dssp             TT
T ss_pred             CC
T ss_conf             65


No 139
>>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A* (A:1-216)
Probab=20.69  E-value=51  Score=13.28  Aligned_cols=28  Identities=4%  Similarity=-0.108  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCHH
Q ss_conf             8999999976201697189982789979
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKFIFSESTNSDQ  246 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~if~e~~~~~~  246 (294)
                      .+++.++.+.+|+.|+++|..-...++.
T Consensus       120 t~e~~~~~~~ak~~g~~~i~iT~~~~s~  147 (216)
T 2zj3_A          120 TADTLMGLRYCKERGALTVGITNTVGSS  147 (216)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEESCTTCH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             7789999999998799399997789986


No 140
>>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic} (A:)
Probab=20.65  E-value=32  Score=14.64  Aligned_cols=23  Identities=13%  Similarity=0.345  Sum_probs=19.0

Q ss_pred             CCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             07899999997620169718998
Q gi|254780537|r  217 RSPSMMRHAINQMRSHKIKFIFS  239 (294)
Q Consensus       217 ps~~~l~~~~~~ik~~~v~~if~  239 (294)
                      -+|.+++++.+..|+.+|++-|.
T Consensus        12 gtpeelkklkeeakkanirvtfw   34 (36)
T 2ki0_A           12 GTPEELKKLKEEAKKANIRVTFW   34 (36)
T ss_dssp             CCHHHHHHHHHHHHHHCCCCCBC
T ss_pred             CCHHHHHHHHHHHHHCCEEEEEE
T ss_conf             99899999999877536799860


No 141
>>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A* (A:1-105,A:237-273)
Probab=20.26  E-value=52  Score=13.22  Aligned_cols=46  Identities=13%  Similarity=0.145  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCH-HHHHHHHHHHCCCEEEEEE
Q ss_conf             899999997620169718998278997-9999999982993444320
Q gi|254780537|r  219 PSMMRHAINQMRSHKIKFIFSESTNSD-QPAKQVAYETNASYGGVLY  264 (294)
Q Consensus       219 ~~~l~~~~~~ik~~~v~~if~e~~~~~-~~~~~ia~e~~~~~~~~~~  264 (294)
                      ...+.+..+++.+.++++|..--+... -..+.+.+...++++....
T Consensus        60 ~~~~~~~~~~L~~~g~~~IVIACNTAsa~~ld~Lr~~~~iPiI~iV~  106 (142)
T 2oho_A           60 KEYTWELVNFLLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVH  106 (142)
T ss_dssp             HHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESHT
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             99999999999855787599961578876378776404676464235


No 142
>>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum} (A:)
Probab=20.26  E-value=52  Score=13.22  Aligned_cols=10  Identities=40%  Similarity=0.275  Sum_probs=3.1

Q ss_pred             HHHHCCCCEE
Q ss_conf             5776037899
Q gi|254780537|r   67 AIKIQNADLI   76 (294)
Q Consensus        67 ~~~i~~Adli   76 (294)
                      +.+|.+||+|
T Consensus       183 l~AI~~AD~I  192 (341)
T 2p0y_A          183 IDAIXAADQI  192 (341)
T ss_dssp             HHHHHHCSEE
T ss_pred             HHHHHCCCEE
T ss_conf             8998639989


No 143
>>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, structure, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} (A:41-164)
Probab=20.12  E-value=52  Score=13.21  Aligned_cols=53  Identities=9%  Similarity=-0.056  Sum_probs=33.2

Q ss_pred             CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCH
Q ss_conf             52145775297288722688640007899999997620169718998278997
Q gi|254780537|r  193 CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSD  245 (294)
Q Consensus       193 af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~  245 (294)
                      |..|.++.+|++...+................=+..++..+..+++++.....
T Consensus        43 A~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~n~~~~~~~Ga~v~~~~~~~~~   95 (124)
T 1tzj_A           43 QVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDI   95 (124)
T ss_dssp             HHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC----
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCEECCCCCCH
T ss_conf             99999997299479998277552126677412400565410352111578413


Done!