HHsearch results for GI: 254780537 and protein with PDBid: 1pq4_A

>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=100.00  E-value=0  Score=443.69  Aligned_cols=259  Identities=22%  Similarity=0.353  Sum_probs=233.1

Q ss_pred             CCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             88289997528999999851891489996268898012022712457760378999988761068999997423557521
Q gi|254780537|r   22 QKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKII  101 (294)
Q Consensus        22 ~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i  101 (294)
                      ++++||||++|+++||++||||+++|++|+|+|.|||+|+|+|+|+++|++||+||+||.+||+||.+.+.+..++.+++
T Consensus         1 d~l~Iv~t~~pl~~~v~~I~gd~v~V~~L~p~~~dpH~ye~tp~d~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~vi   80 (291)
T 1pq4_A            1 DAMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANANMKLI   80 (291)
T ss_dssp             CCEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCGGGCCCCHHHHHHGGGCSEEEECCTTTTTTTHHHHHHHCSSSEEE
T ss_pred             CCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCC
T ss_conf             99789997689999999982892489980699989756668999999997399999958626889999999725798753


Q ss_pred             CCCCCCCHHHHHH-----------------------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1123742022210-----------------------------01233463011122135678999999999864318889
Q gi|254780537|r  102 TVTDGINPIGVSE-----------------------------DTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNA  152 (294)
Q Consensus       102 ~~~~~i~~~~~~~-----------------------------~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~  152 (294)
                      .+++++..+....                             +++++++.|||+||||.|++.++++|++.|+++||+++
T Consensus        81 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~~~a~~Ia~~L~~~dP~~~  160 (291)
T 1pq4_A           81 DSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAKGALMVADPHIWLSPTLVKRQATTIAKELAELDPDNR  160 (291)
T ss_dssp             ETTTTCCCCBSCC----------------------------------CCBCCCGGGCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             02478654210124665433356655554455555433333344566887872753877899999999999988580028


Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             99999899863014553378998863078447369982665214577529728872268864000789999999762016
Q gi|254780537|r  153 KKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH  232 (294)
Q Consensus       153 ~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~  232 (294)
                      ++|++|+++|.++|++|+.+++.+++++|  ++.++++|++|+||+++|||++.++.  .++.+|||++|+++++.||++
T Consensus       161 ~~y~~n~~~~~~~l~~l~~~~~~~~~~~~--~~~~v~~H~a~~Y~~~~~gl~~~~~~--~~~~eps~~~l~~~~~~ik~~  236 (291)
T 1pq4_A          161 DQYEANLAAFLAELERLNQELGQILQPLP--QRKFIVFHPSWAYFARDYNLVQIPIE--VEGQEPSAQELKQLIDTAKEN  236 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCS--CCEEEESSCCCHHHHHHTTCEEEESC--BTTBCCCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHCCCEEEECC--CCCCCCCHHHHHHHHHHHHHC
T ss_conf             99999999999999999999999976541--77754557347899996698166512--578899989999999999974


Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             9718998278997999999998299344432012378777886899999999999998620
Q gi|254780537|r  233 KIKFIFSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       233 ~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                      +|+|||+|++++++.++.|++++|++++.   +|+++      .+|+++|+.|+++|.+||
T Consensus       237 ~i~~if~e~~~~~~~~~~ia~~~g~~~~~---ldpl~------~~y~~~~~~n~~~l~~al  288 (291)
T 1pq4_A          237 NLTMVFGETQFSTKSSEAIAAEIGAGVEL---LDPLA------ADWSSNLKAVAQKIANAN  288 (291)
T ss_dssp             TCCEEEEETTSCCHHHHHHHHHHTCEEEE---ECTTC------SSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCHHHHHHHHHHCCCCEEE---ECCCC------CCHHHHHHHHHHHHHHHH
T ss_conf             99889972899919999999980998798---68873------269999999999999986