HHsearch results for GI: 254780537 and protein with PDBid: 1xvl_A

>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=100.00  E-value=0  Score=474.63  Aligned_cols=272  Identities=42%  Similarity=0.771  Sum_probs=253.8

Q ss_pred             CCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf             35882899975289999998518914899962688980120227124577603789999887610689999974235575
Q gi|254780537|r   20 TTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTK   99 (294)
Q Consensus        20 ~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~   99 (294)
                      ..++++||||++||+|+|++|+||+|+|++|+|+|.|||+|+|+|+|+++|++||+|||||.+||+|+.+++.+... ..
T Consensus        42 ~~~~~~VVaT~~~l~d~a~~I~Gd~v~V~~lvp~g~dPH~yep~p~d~~~l~~ADlvv~~G~~~E~~l~~~~~~~~~-~~  120 (321)
T 1xvl_A           42 TEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNVKD-VP  120 (321)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTSSS-CC
T ss_pred             CCCCCEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC-CC
T ss_conf             78986899987499999999818826999806999795467689999999966999999488507899999863566-64


Q ss_pred             CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             21112374202221001233463011122135678999999999864318889999998998630145533789988630
Q gi|254780537|r  100 IITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEK  179 (294)
Q Consensus       100 ~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~  179 (294)
                      ++.+.+++...... ++++++..|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|++++.+++..+++
T Consensus       121 ~~~~~~~~~~~~~~-~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~~  199 (321)
T 1xvl_A          121 SVVLTEGIEPIPIA-DGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQ  199 (321)
T ss_dssp             EEETTTTCCCCBCC-SSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEECCCCCCCCC-CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             26750465665545-67764467750505999999999999999987684214789999999999999999999999730


Q ss_pred             CCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCE
Q ss_conf             78447369982665214577529728872268864000789999999762016971899827899799999999829934
Q gi|254780537|r  180 VDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASY  259 (294)
Q Consensus       180 ~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~  259 (294)
                      +|.++|.|+++|++|+||+++|||++.++...+++.+|||++|+++++.||+++|+|||+|++.+++.++.|++++++++
T Consensus       200 ~~~~~~~~v~~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~e~~~~~  279 (321)
T 1xvl_A          200 VPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARF  279 (321)
T ss_dssp             SCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEE
T ss_pred             CCCCCCEEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf             56666179982717899999869936751365775667899999999999864983899728989499999999859971


Q ss_pred             EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             4432012378777886899999999999998620
Q gi|254780537|r  260 GGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL  293 (294)
Q Consensus       260 ~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  293 (294)
                      ...+++|+|+..++++++|++||++|+++|++||
T Consensus       280 ~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL  313 (321)
T 1xvl_A          280 GGNLYVDSLSTEEGPVPTFLDLLEYDARVITNGL  313 (321)
T ss_dssp             EEEECSSCCCCSSSSCCSHHHHHHHHHHHHHTTS
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             3632103688889886789999999999999997