HHsearch results for GI: 254780537 and protein with PDBid: 3cx3_A
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=100.00 E-value=0 Score=457.99 Aligned_cols=271 Identities=23% Similarity=0.368 Sum_probs=243.8
Q ss_pred CCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 64335882899975289999998518914899962688980120227124577603789999887610689999974235
Q gi|254780537|r 17 ASATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKK 96 (294)
Q Consensus 17 ~~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~ 96 (294)
.+.++++++||||++|++++|++|+||+++|+ ++|+|+|||+|+|+|+|+++|++||+||+||.+||+|+.+++.+...
T Consensus 4 ~~~~~~~l~Vvts~~pl~~lv~~I~gd~v~V~-li~~g~dpH~ye~~p~d~~~l~~ADliv~~G~~lE~~~~~~~~~~~~ 82 (284)
T 3cx3_A 4 ESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVR-MIQSSSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKK 82 (284)
T ss_dssp ---CCSCCEEEESSHHHHHHHHHHHTTSSEEE-ECCCCSCTTTCCCCHHHHHHHHHSSEEEESCTTTSCTTTTCCTTTTT
T ss_pred CCCCCCCCEEEEECHHHHHHHHHHCCCCCEEE-ECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHC
T ss_conf 77789996899987899999999749961599-71899898735589999999964999999188507789999998641
Q ss_pred -CCCCCCCCCCCCHHH--------HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf -575211123742022--------21001233463011122135678999999999864318889999998998630145
Q gi|254780537|r 97 -GTKIITVTDGINPIG--------VSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIR 167 (294)
Q Consensus 97 -~~~~i~~~~~i~~~~--------~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~ 167 (294)
+..++++++++.... ..+++++|++.|||+||||.|++.|+++|++.|+++||+|+++|++|+++|.++|+
T Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~n~~~~~~~l~ 162 (284)
T 3cx3_A 83 SKVKVLEASEGMTLERVPGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQ 162 (284)
T ss_dssp CCCEEEETTTTCCCCBCCC-------------CCBCCCGGGSHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 57513211236540001342110045554545688886657836789999999999998683106788999999987789
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHH
Q ss_conf 53378998863078447369982665214577529728872268864000789999999762016971899827899799
Q gi|254780537|r 168 NSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQP 247 (294)
Q Consensus 168 ~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~ 247 (294)
+|+.+++..++.+ .++.++++|++|+||+++|||++.++.+.+++.+|||++|+++++.||+++|+|||+|++++++.
T Consensus 163 ~l~~~~~~~l~~~--~~~~~v~~h~a~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~ 240 (284)
T 3cx3_A 163 ELTKKFQPKFEKA--TQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKV 240 (284)
T ss_dssp HHHHHHHHHHHSC--SCCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCCHH
T ss_pred HHHHHHHHHHHHC--CCCCEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf 9889999987531--45645886612799999879944441112565542288999999999855997899818999199
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9999998299344432012378777886899999999999998620
Q gi|254780537|r 248 AKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294)
Q Consensus 248 ~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294)
++.|++++|++++. +|+|+.....+.+|++||+.|+++|.+||
T Consensus 241 ~~~la~e~g~~~~~---ld~l~~~~~~~~~Y~~~m~~n~~~l~~aL 283 (284)
T 3cx3_A 241 AETLVKSTGVGLKT---LNPLESDPQNDKTYLENLEENMSILAEEL 283 (284)
T ss_dssp HHHHHSSSSCCEEE---CCCSSSCCCSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHCCCCEEE---ECCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999971998688---56777788886779999999999999973