HHSEARCH alignment of GI: 254780537 and SCOP domain: d1xvla1

Alignment
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=100.00  E-value=0  Score=477.09  Aligned_cols=274  Identities=42%  Similarity=0.761  Sum_probs=253.5

Q ss_pred             CCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf             33588289997528999999851891489996268898012022712457760378999988761068999997423557
Q gi|254780537|r   19 ATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGT   98 (294)
Q Consensus        19 ~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~   98 (294)
                      .+.+|++||||++||+++|++|+||+++|++|+|+|.|||+|+|+|+|+++|++|||||+||.+||+|+.+++.+... .
T Consensus         2 ~~~~k~~Vvas~~~l~~iv~~I~Gd~~~V~~l~p~~~dPH~y~~~p~d~~~l~~ADliv~~G~~lE~~l~~~~~~~~~-~   80 (279)
T d1xvla1           2 ETEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNVKD-V   80 (279)
T ss_dssp             CCCCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTSSS-C
T ss_pred             CCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCC-C
T ss_conf             988886799987699999999818844899806989796457689999999973999999799851889998764135-5


Q ss_pred             CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             52111237420222100123346301112213567899999999986431888999999899863014553378998863
Q gi|254780537|r   99 KIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIE  178 (294)
Q Consensus        99 ~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~  178 (294)
                      .++.+.++..... ..++++|++.|||+||||.|++.++++|++.|+++||+|+++|++|+++|.++|++++.+++..++
T Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~~~dpH~Wldp~~~~~~a~~Ia~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~  159 (279)
T d1xvla1          81 PSVVLTEGIEPIP-IADGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLE  159 (279)
T ss_dssp             CEEETTTTCCCCB-CCSSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEECCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             4211103545655-445555456774211176889999999999998758554467999899774005665799999996


Q ss_pred             CCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf             07844736998266521457752972887226886400078999999976201697189982789979999999982993
Q gi|254780537|r  179 KVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNAS  258 (294)
Q Consensus       179 ~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~  258 (294)
                      ++|.+++.|+++|++|+||+++|||+++++...+++.+|||++|+++++.||+++|+|||+|++++++.++.|+++++++
T Consensus       160 ~~~~~~~~~v~~H~a~~Yf~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~~~~  239 (279)
T d1xvla1         160 QVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGAR  239 (279)
T ss_dssp             TSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCE
T ss_pred             HCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCC
T ss_conf             18865528999545301356636962663025688566898899999999875486189824778829999999984997


Q ss_pred             EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             444320123787778868999999999999986209
Q gi|254780537|r  259 YGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTLF  294 (294)
Q Consensus       259 ~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL~  294 (294)
                      ++..+++|+|+...+++++|++||+.|+++|.+||-
T Consensus       240 ~~~~~~~d~l~~~~~~~~tY~~~m~~n~~~i~~aL~  275 (279)
T d1xvla1         240 FGGNLYVDSLSTEEGPVPTFLDLLEYDARVITNGLL  275 (279)
T ss_dssp             EEEEECSSCCCCSSSSCCSHHHHHHHHHHHHHTTSS
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             045222036888898866799999999999999964


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: TroA-like
domain: Mn transporter MntC
species: Synechocystis sp. pcc 6803 [TaxId: 1148]