Query gi|254780537|ref|YP_003064950.1| periplasmic solute binding protein [Candidatus Liberibacter asiaticus str. psy62] Match_columns 294 No_of_seqs 135 out of 2447 Neff 7.8 Searched_HMMs 13730 Date Wed Jun 1 09:55:17 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780537.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1xvla1 c.92.2.2 (A:49-327) Mn 100.0 0 0 477.1 27.4 274 19-294 2-275 (279) 2 d1psza_ c.92.2.2 (A:) Pneumoco 100.0 0 0 474.9 26.5 275 18-293 4-284 (286) 3 d1toaa_ c.92.2.2 (A:) Periplas 100.0 0 0 468.5 26.1 270 22-293 1-275 (277) 4 d1pq4a_ c.92.2.2 (A:) Periplas 100.0 0 0 449.8 26.1 259 22-293 1-288 (289) 5 d1m1na_ c.92.2.3 (A:) Nitrogen 90.0 0.59 4.3E-05 23.7 15.6 150 128-294 297-465 (477) 6 d2iw1a1 c.87.1.8 (A:2-371) Lip 86.9 0.93 6.8E-05 22.4 6.2 16 35-50 21-36 (370) 7 d2bfwa1 c.87.1.8 (A:218-413) G 75.4 2.4 0.00017 19.6 4.8 90 65-164 103-193 (196) 8 d1tyeb2 c.62.1.1 (B:107-354) I 65.2 3.9 0.00028 18.2 4.2 60 222-289 186-245 (248) 9 d1xmpa_ c.23.8.1 (A:) N5-CAIR 64.5 4 0.00029 18.1 6.1 28 73-102 57-84 (155) 10 d2ihta1 c.31.1.3 (A:198-374) C 62.7 2.4 0.00018 19.6 2.6 120 20-150 18-159 (177) 11 d2bisa1 c.87.1.8 (A:1-437) Gly 60.7 4.7 0.00034 17.6 5.6 19 34-52 23-41 (437) 12 d1o4va_ c.23.8.1 (A:) N5-CAIR 60.4 4.7 0.00034 17.6 6.9 29 73-103 56-84 (169) 13 d1iuka_ c.2.1.8 (A:) Hypotheti 60.3 3.7 0.00027 18.3 3.2 44 218-261 79-122 (136) 14 d1m5wa_ c.1.24.1 (A:) Pyridoxi 59.2 4.9 0.00036 17.5 5.8 43 219-264 112-155 (242) 15 d1r2ra_ c.1.1.1 (A:) Triosepho 56.3 5.5 0.0004 17.2 6.8 70 173-258 145-225 (246) 16 d1o5xa_ c.1.1.1 (A:) Triosepho 56.3 5.5 0.0004 17.2 8.0 89 173-284 145-244 (246) 17 d1y81a1 c.2.1.8 (A:6-121) Hypo 54.7 5.8 0.00042 17.0 5.3 44 218-261 65-108 (116) 18 d1m6ja_ c.1.1.1 (A:) Triosepho 51.7 6.5 0.00047 16.7 5.8 59 184-258 166-235 (260) 19 d1mioa_ c.92.2.3 (A:) Nitrogen 48.5 7.3 0.00053 16.3 15.6 148 128-293 286-506 (525) 20 d1mo0a_ c.1.1.1 (A:) Triosepho 47.6 7.5 0.00055 16.2 6.3 70 173-258 154-234 (257) 21 d2djia1 c.31.1.3 (A:187-363) P 46.8 7.7 0.00056 16.2 6.2 136 20-168 20-171 (177) 22 d1neya_ c.1.1.1 (A:) Triosepho 45.9 7.9 0.00058 16.1 5.8 69 174-258 147-226 (247) 23 d1qcza_ c.23.8.1 (A:) N5-CAIR 44.0 8.5 0.00062 15.9 6.4 55 45-103 31-85 (163) 24 d1ytla1 c.31.1.6 (A:17-174) Ac 40.5 9.5 0.0007 15.5 4.9 37 67-103 87-125 (158) 25 d2pjua1 c.92.3.1 (A:11-196) Pr 38.7 10 0.00074 15.3 6.6 149 27-260 6-164 (186) 26 d2btma_ c.1.1.1 (A:) Triosepho 36.5 11 0.0008 15.1 7.3 59 184-258 159-228 (251) 27 d1u11a_ c.23.8.1 (A:) N5-CAIR 35.1 12 0.00084 15.0 6.8 31 71-103 56-86 (159) 28 d1ybha1 c.31.1.3 (A:281-459) A 34.6 12 0.00086 14.9 6.1 71 31-103 35-114 (179) 29 d1hx0a2 c.1.8.1 (A:1-403) Anim 34.0 12 0.00087 14.9 3.0 31 33-63 21-65 (403) 30 d1h6qa_ b.88.1.2 (A:) Translat 33.2 12 0.0009 14.8 4.0 38 130-167 85-122 (168) 31 d1xg7a_ a.96.1.6 (A:) Hypothet 32.9 8.3 0.0006 15.9 1.5 95 157-269 120-216 (245) 32 d1trea_ c.1.1.1 (A:) Triosepho 31.6 13 0.00095 14.6 6.1 59 184-258 160-228 (255) 33 d1rd5a_ c.1.2.4 (A:) Trp synth 31.0 13 0.00098 14.5 7.4 74 219-293 185-260 (261) 34 d2ez9a1 c.31.1.3 (A:183-365) P 30.7 14 0.00099 14.5 7.1 63 21-85 30-107 (183) 35 d2ji7a1 c.31.1.3 (A:195-369) O 30.5 14 0.001 14.5 5.7 63 20-84 18-90 (175) 36 d2d59a1 c.2.1.8 (A:4-142) Hypo 29.3 14 0.001 14.4 5.1 45 217-261 82-126 (139) 37 d1qgna_ c.67.1.3 (A:) Cystathi 28.7 15 0.0011 14.3 7.3 84 145-230 246-334 (398) 38 d1kv5a_ c.1.1.1 (A:) Triosepho 25.4 17 0.0012 13.9 6.8 59 184-258 159-228 (249) 39 d2fdsa1 c.1.2.3 (A:1-324) Prot 25.0 2.8 0.0002 19.2 -2.1 12 185-196 161-172 (324) 40 d1riqa1 a.203.1.1 (A:237-457) 24.8 17 0.0012 13.8 3.7 71 133-204 80-157 (221) 41 d1txja_ b.88.1.2 (A:) Translat 24.7 17 0.0013 13.8 4.3 38 130-167 88-125 (171) 42 d1gc0a_ c.67.1.3 (A:) Methioni 24.6 17 0.0013 13.8 8.0 39 138-176 231-270 (392) 43 d1bhga3 c.1.8.3 (A:329-632) be 24.5 17 0.0013 13.8 4.6 18 225-242 197-214 (304) 44 d2acva1 c.87.1.10 (A:3-463) Tr 23.0 18 0.0013 13.6 2.2 25 232-256 367-392 (461) 45 d1o66a_ c.1.12.8 (A:) Ketopant 22.6 19 0.0014 13.5 8.0 43 218-261 157-199 (260) 46 d1n2za_ c.92.2.2 (A:) Vitamin 21.5 20 0.0014 13.4 7.1 41 195-242 156-196 (245) 47 d1ko7a1 c.98.2.1 (A:1-129) HPr 21.3 20 0.0015 13.4 3.8 46 216-261 63-109 (129) 48 d2ctza1 c.67.1.3 (A:1-421) O-a 21.0 20 0.0015 13.3 8.4 51 145-195 270-320 (421) 49 d1twda_ c.1.30.1 (A:) Copper h 20.5 21 0.0015 13.3 7.2 70 187-260 116-194 (247) 50 d1j3ba1 c.91.1.1 (A:212-529) P 20.5 21 0.0015 13.3 3.7 22 221-242 195-216 (318) No 1 >d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]} Probab=100.00 E-value=0 Score=477.09 Aligned_cols=274 Identities=42% Similarity=0.761 Sum_probs=253.5 Q ss_pred CCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC Q ss_conf 33588289997528999999851891489996268898012022712457760378999988761068999997423557 Q gi|254780537|r 19 ATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGT 98 (294) Q Consensus 19 ~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~ 98 (294) .+.+|++||||++||+++|++|+||+++|++|+|+|.|||+|+|+|+|+++|++|||||+||.+||+|+.+++.+... . T Consensus 2 ~~~~k~~Vvas~~~l~~iv~~I~Gd~~~V~~l~p~~~dPH~y~~~p~d~~~l~~ADliv~~G~~lE~~l~~~~~~~~~-~ 80 (279) T d1xvla1 2 ETEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNVKD-V 80 (279) T ss_dssp CCCCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTSSS-C T ss_pred CCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCC-C T ss_conf 988886799987699999999818844899806989796457689999999973999999799851889998764135-5 Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH Q ss_conf 52111237420222100123346301112213567899999999986431888999999899863014553378998863 Q gi|254780537|r 99 KIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIE 178 (294) Q Consensus 99 ~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~ 178 (294) .++.+.++..... ..++++|++.|||+||||.|++.++++|++.|+++||+|+++|++|+++|.++|++++.+++..++ T Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~dpH~Wldp~~~~~~a~~Ia~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~ 159 (279) T d1xvla1 81 PSVVLTEGIEPIP-IADGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLE 159 (279) T ss_dssp CEEETTTTCCCCB-CCSSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHT T ss_pred CCCEECCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 4211103545655-445555456774211176889999999999998758554467999899774005665799999996 Q ss_pred CCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCC Q ss_conf 07844736998266521457752972887226886400078999999976201697189982789979999999982993 Q gi|254780537|r 179 KVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNAS 258 (294) Q Consensus 179 ~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~ 258 (294) ++|.+++.|+++|++|+||+++|||+++++...+++.+|||++|+++++.||+++|+|||+|++++++.++.|+++++++ T Consensus 160 ~~~~~~~~~v~~H~a~~Yf~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~~~~ 239 (279) T d1xvla1 160 QVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGAR 239 (279) T ss_dssp TSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCE T ss_pred HCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCC T ss_conf 18865528999545301356636962663025688566898899999999875486189824778829999999984997 Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC Q ss_conf 444320123787778868999999999999986209 Q gi|254780537|r 259 YGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTLF 294 (294) Q Consensus 259 ~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL~ 294 (294) ++..+++|+|+...+++++|++||+.|+++|.+||- T Consensus 240 ~~~~~~~d~l~~~~~~~~tY~~~m~~n~~~i~~aL~ 275 (279) T d1xvla1 240 FGGNLYVDSLSTEEGPVPTFLDLLEYDARVITNGLL 275 (279) T ss_dssp EEEEECSSCCCCSSSSCCSHHHHHHHHHHHHHTTSS T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC T ss_conf 045222036888898866799999999999999964 No 2 >d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]} Probab=100.00 E-value=0 Score=474.91 Aligned_cols=275 Identities=34% Similarity=0.613 Sum_probs=252.4 Q ss_pred CCCCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC- Q ss_conf 4335882899975289999998518914899962688980120227124577603789999887610689999974235- Q gi|254780537|r 18 SATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKK- 96 (294) Q Consensus 18 ~~~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~- 96 (294) +.+.+|++||||++||+++|++|+||+++|++|+|+|.|||+|||+|+|+++|++||||||||.+||+|+.+++.+... T Consensus 4 ~~~~~kl~VVat~~~l~~iv~~I~Gd~v~V~~L~p~g~dPH~yep~p~d~~~l~~ADliv~~G~~~E~~~~~~~~~~~~~ 83 (286) T d1psza_ 4 TTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKLVEN 83 (286) T ss_dssp GGGSCCEEEEEEEHHHHHHHHHHHGGGEEEEEEECTTSCSSSCCCCHHHHHHHHHCSEEEECCTTSTTHHHHHHHHHHHH T ss_pred CCCCCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH T ss_conf 77899957999771999999998098259998069897985675899999999709999987988632577889988654 Q ss_pred -----CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH Q ss_conf -----575211123742022210012334630111221356789999999998643188899999989986301455337 Q gi|254780537|r 97 -----GTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSIL 171 (294) Q Consensus 97 -----~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~ 171 (294) ....+...++++.... ++++++++.|||+|+||.|++.++++|+++|+++||+++++|++|+++|.++|++|+. T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dPH~Wldp~~~~~~a~~i~~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~ 162 (286) T d1psza_ 84 AKKTENKDYFAVSDGVDVIYL-EGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDK 162 (286) T ss_dssp TTCCBTTTEEETTTTSCCCBS-TTCCSTTCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHH T ss_pred HCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 302565148983166311334-5666555566443568888999999999999885801268999999998767888889 Q ss_pred HHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH Q ss_conf 89988630784473699826652145775297288722688640007899999997620169718998278997999999 Q gi|254780537|r 172 PLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQV 251 (294) Q Consensus 172 ~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~i 251 (294) +++.+++++|..+|.++++|++|+||+++|||++.++.+.+++.+||+++++++++.||+++|+|||+|++++++.++.| T Consensus 163 ~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~l 242 (286) T d1psza_ 163 ESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTV 242 (286) T ss_dssp HHTTTTTTSCTTTCCEEEEECCCHHHHHHHTCCEEEEESSTTSCSSCHHHHHHHHHHHHTSCCCCEEEETTSCSHHHHHH T ss_pred HHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH T ss_conf 99998765214535999744403667774487420102105633457168999999988378259999088892999999 Q ss_pred HHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 998299344432012378777886899999999999998620 Q gi|254780537|r 252 AYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294) Q Consensus 252 a~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294) |+++|++++.++++|++++.+..+++|++||++|+++|++|| T Consensus 243 a~~~gv~v~~~~~~d~l~~~~~~~~~Y~~~m~~n~~~l~~aL 284 (286) T d1psza_ 243 SQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGL 284 (286) T ss_dssp HHHHTCCEEEEECSSSCCCTTSTTCSHHHHHHHHHHHHHHHH T ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 997399678641565667789875779999999999999986 No 3 >d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]} Probab=100.00 E-value=0 Score=468.47 Aligned_cols=270 Identities=24% Similarity=0.402 Sum_probs=250.0 Q ss_pred CCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC Q ss_conf 88289997528999999851891489996268898012022712457760378999988761068999997423557521 Q gi|254780537|r 22 QKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKII 101 (294) Q Consensus 22 ~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i 101 (294) +||+||||++||+++|++|+||+++|++|+|+|+|||+|||+|+|+++|++||+||+||.+||+|+.+++.+...+..++ T Consensus 1 gkp~Vv~t~~pl~~~v~~I~gd~v~V~~lip~~~dPH~ye~~p~d~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~v~ 80 (277) T d1toaa_ 1 GKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRLVV 80 (277) T ss_dssp CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHHCSEEEECCTTCSTTCHHHHHHHTTSSEEE T ss_pred CCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCEEE T ss_conf 99899998879999999982994589980697979827768999999995699999989986613589998647887155 Q ss_pred CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC Q ss_conf 11237420222100123346301112213567899999999986431888999999899863014553378998863078 Q gi|254780537|r 102 TVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVD 181 (294) Q Consensus 102 ~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p 181 (294) ...+..... ..++++|++.|||+|+||.|++.++++|++.|+++||+|++.|++|+++|.++|++|+.+++..++.+| T Consensus 81 ~~~~~~~~~--~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~n~~~~~~~L~~l~~~~~~~~~~~~ 158 (277) T d1toaa_ 81 AVSETIPVS--QRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLP 158 (277) T ss_dssp EGGGGSCGG--GSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC T ss_pred ECCCCCCCC--CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 204444421--013545333564144074158999999999999874666789999999999999998789999987501 Q ss_pred CCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEE- Q ss_conf 4473699826652145775297288722688640007899999997620169718998278997999999998299344- Q gi|254780537|r 182 PEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYG- 260 (294) Q Consensus 182 ~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~- 260 (294) ..+|.++++|++|+||+++|||++.++.+.+++.+||+++++++++.||+++|+|||+|++++++.++.|+++++++.. T Consensus 159 ~~~~~~v~~H~a~~Yf~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~~~k~~~ 238 (277) T d1toaa_ 159 AERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHV 238 (277) T ss_dssp GGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHHHHHHTTTCC T ss_pred CCCEEEEEECCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEE T ss_conf 46438999455125578734864011123344213414799999999985177089954778818999999985788413 Q ss_pred ----EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf ----432012378777886899999999999998620 Q gi|254780537|r 261 ----GVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294) Q Consensus 261 ----~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294) +.++.|++++.+..+.+|++||++|+++|++|| T Consensus 239 ~~~~~~l~~d~l~~~~~~~~tY~~~m~~N~~~i~~aL 275 (277) T d1toaa_ 239 VQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAAL 275 (277) T ss_dssp CEEEEEECSSSCCCTTSGGGSHHHHHHHHHHHHHHHH T ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 3447723544456778883659999999999999986 No 4 >d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Probab=100.00 E-value=0 Score=449.82 Aligned_cols=259 Identities=22% Similarity=0.353 Sum_probs=233.6 Q ss_pred CCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC Q ss_conf 88289997528999999851891489996268898012022712457760378999988761068999997423557521 Q gi|254780537|r 22 QKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKII 101 (294) Q Consensus 22 ~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i 101 (294) ++++||||++||+++|++|+||+++|++|+|+|.|||+|+|+|+|+++|++||+|||||.+||+||.+.+.+..++.+++ T Consensus 1 d~l~Vv~si~pl~~lv~~i~gd~~~V~~L~p~g~dPH~y~~~psd~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~~v 80 (289) T d1pq4a_ 1 DAMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANANMKLI 80 (289) T ss_dssp CCEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCGGGCCCCHHHHHHGGGCSEEEECCTTTTTTTHHHHHHHCSSSEEE T ss_pred CCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCC T ss_conf 99889997689999999983893479980698979835768999999996599999969632678999998745698741 Q ss_pred CCCCCCCHHHHH-----------------------------HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 112374202221-----------------------------001233463011122135678999999999864318889 Q gi|254780537|r 102 TVTDGINPIGVS-----------------------------EDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNA 152 (294) Q Consensus 102 ~~~~~i~~~~~~-----------------------------~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~ 152 (294) ..++++..+... ++++++++.|||+||||.|++.++++|++.|+++||+++ T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DPH~Wldp~n~~~~a~~I~~~L~~~dP~~~ 160 (289) T d1pq4a_ 81 DSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAKGALMVADPHIWLSPTLVKRQATTIAKELAELDPDNR 160 (289) T ss_dssp ETTTTCCCCBSCC----------------------------------CCBCCCGGGCHHHHHHHHHHHHHHHHHHCGGGH T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 02366443110135665532466665544564455421211000133455512200430178999999999987504203 Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC Q ss_conf 99999899863014553378998863078447369982665214577529728872268864000789999999762016 Q gi|254780537|r 153 KKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH 232 (294) Q Consensus 153 ~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~ 232 (294) +.|++|+++|.++|.+|+.+++++++.++ ++.++++|++|+||+++|||++.++. .++.+||+++++++++.||++ T Consensus 161 ~~y~~N~~~~~~~L~~l~~~~~~~l~~~~--~~~~v~~H~a~~Yf~~~ygl~~~~~~--~~~~eps~~~l~~l~~~ik~~ 236 (289) T d1pq4a_ 161 DQYEANLAAFLAELERLNQELGQILQPLP--QRKFIVFHPSWAYFARDYNLVQIPIE--VEGQEPSAQELKQLIDTAKEN 236 (289) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCS--CCEEEESSCCCHHHHHHTTCEEEESC--BTTBCCCHHHHHHHHHHHHTT T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCEEEECCCHHHHHHHCCCEEEEEE--CCCCCCCHHHHHHHHHHHHHC T ss_conf 45655189887658999899998725324--78323325328779885485044421--368899989999999999974 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 9718998278997999999998299344432012378777886899999999999998620 Q gi|254780537|r 233 KIKFIFSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294) Q Consensus 233 ~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294) +|+|||+|++++++.++.|++++|+++.. +|+|+ .+|+++|+.|+++|.+|| T Consensus 237 ~i~~if~e~q~~~~~~~~la~~~gv~v~~---ldpl~------~~y~~~m~~n~~~i~~A~ 288 (289) T d1pq4a_ 237 NLTMVFGETQFSTKSSEAIAAEIGAGVEL---LDPLA------ADWSSNLKAVAQKIANAN 288 (289) T ss_dssp TCCEEEEETTSCCHHHHHHHHHHTCEEEE---ECTTC------SSHHHHHHHHHHHHHHHH T ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCEEE---ECCCC------CCHHHHHHHHHHHHHHHC T ss_conf 99899973898939999999980998798---78873------259999999999999864 No 5 >d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]} Probab=89.98 E-value=0.59 Score=23.68 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=79.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC----HHHHHHCCC Q ss_conf 2135678999999999864318889999998998630145533789988630784473699826652----145775297 Q gi|254780537|r 128 MSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCL----VYLAEDFGF 203 (294) Q Consensus 128 ldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af----~Y~~~~yGl 203 (294) ..+.+.......|++.|..-.|+..+.+- +...+++.+...+++..+. .+|.++...+.. .-|.+++|+ T Consensus 297 ~G~~~T~~~Lr~ia~~~g~~i~~~~e~~i---~~e~~~~~~~l~~~r~~l~----Gkrv~i~~~~~~~~~l~~~l~elGm 369 (477) T d1m1na_ 297 FGPTKTIESLRAIAAKFDESIQKKCEEVI---AKYKPEWEAVVAKYRPRLE----GKRVMLYIGGLRPRHVIGAYEDLGM 369 (477) T ss_dssp SSHHHHHHHHHHHHTTSCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHT----TCEEEECBSSSHHHHTHHHHHTTTC T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHC----CCCEEEECCCHHHHHHHHHHHHCCC T ss_conf 75057999999999984897305689999---9899999999999987624----8827996684348999999998799 Q ss_pred EEEEECC-CCCCC--CCC------------HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCC Q ss_conf 2887226-88640--007------------89999999762016971899827899799999999829934443201237 Q gi|254780537|r 204 KSLYLWP-INSDS--ERS------------PSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVLYVDSL 268 (294) Q Consensus 204 ~~~~~~~-~~~~~--eps------------~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l 268 (294) +++.+.. ..+.. +.. -.+..++.+.|++.++..++.. ..-+.+++..|++...+..-|-. T Consensus 370 evv~~~~~~~~~~d~~~~~~~~~~~~~i~~d~~~~el~~~i~~~~pDL~ig~-----~~~k~~a~k~gIP~~~~~~~dr~ 444 (477) T d1m1na_ 370 EVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGSG-----IKEKFIFQKMGIPFREMHSWDYS 444 (477) T ss_dssp EEEEEEESSCCHHHHHTTTTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEEC-----HHHHHHHHHTTCCEEESSSGGGC T ss_pred EEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCEEEEC-----CHHHHHHHHCCCCCCCCCCCCCC T ss_conf 7889861577767899999866988689568999999999986599999978-----50589999819996217753458 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCC Q ss_conf 87778868999999999999986209 Q gi|254780537|r 269 SKPDGPAPTYLDLLRFSLTKIVDTLF 294 (294) Q Consensus 269 ~~~~~~~~~Y~~~m~~N~~~l~~aL~ 294 (294) + +--.|-+++ +-.+.|.++|+ T Consensus 445 g----p~~GY~G~~-~la~~i~~al~ 465 (477) T d1m1na_ 445 G----PYHGFDGFA-IFARDMDMTLN 465 (477) T ss_dssp C----CCSHHHHHH-HHHHHHHHHHT T ss_pred C----CCCCHHHHH-HHHHHHHHHHH T ss_conf 8----877188899-99999999984 No 6 >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Probab=86.89 E-value=0.93 Score=22.36 Aligned_cols=16 Identities=19% Similarity=0.133 Sum_probs=6.1 Q ss_pred HHHHHHCCCEEEEEEE Q ss_conf 9999851891489996 Q gi|254780537|r 35 DITQNIAKDLVTVTTL 50 (294) Q Consensus 35 ~iv~~I~gd~v~V~~l 50 (294) .+++.+.....+|+.+ T Consensus 21 ~la~~L~~~G~~V~v~ 36 (370) T d2iw1a1 21 RIASTVAARGHHVRVY 36 (370) T ss_dssp HHHHHHHHTTCCEEEE T ss_pred HHHHHHHHCCCEEEEE T ss_conf 9999999779979999 No 7 >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Probab=75.36 E-value=2.4 Score=19.63 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=47.3 Q ss_pred HHHH-HHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 2457-760378999988761068999997423557521112374202221001233463011122135678999999999 Q gi|254780537|r 65 ADAI-KIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKA 143 (294) Q Consensus 65 ~d~~-~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~ 143 (294) .++. -++.||+++... -.|++-..+++....+..+|....+ ... +.- .+ +-.+|.+|.+...+++.|.+. T Consensus 103 ~~l~~~~~~~di~v~ps-~~e~~~~~~~Eam~~G~pvI~~~~~--~~~---e~i-~~--~~g~~~~~~~~~~l~~~i~~~ 173 (196) T d2bfwa1 103 EFVRELYGSVDFVIIPS-YFEPFGLVALEAMCLGAIPIASAVG--GLR---DII-TN--ETGILVKAGDPGELANAILKA 173 (196) T ss_dssp HHHHHHHTTCSEEEECC-SCCSSCHHHHHHHHTTCEEEEESCH--HHH---HHC-CT--TTCEEECTTCHHHHHHHHHHH T ss_pred CCCHHCCCCCCCCCCCC-CCCCCCCCCHHHHHCCCEEEECCCC--CCC---EEE-CC--CCEEEECCCCHHHHHHHHHHH T ss_conf 11000012323344322-2112332201333148604651788--532---010-28--731467899999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHC Q ss_conf 864318889999998998630 Q gi|254780537|r 144 LTALDPSNAKKYELNAREYSE 164 (294) Q Consensus 144 L~~~dP~~~~~y~~N~~~~~~ 164 (294) | ..+++....+.+|++++.. T Consensus 174 l-~~~~~~~~~~~~~a~~~a~ 193 (196) T d2bfwa1 174 L-ELSRSDLSKFRENCKKRAM 193 (196) T ss_dssp H-HCCHHHHHHHHHHHHHHHH T ss_pred H-HCCHHHHHHHHHHHHHHHH T ss_conf 9-5799999999999999998 No 8 >d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo sapiens) [TaxId: 9606]} Probab=65.23 E-value=3.9 Score=18.18 Aligned_cols=60 Identities=20% Similarity=0.243 Sum_probs=39.3 Q ss_pred HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 99999762016971899827899799999999829934443201237877788689999999999999 Q gi|254780537|r 222 MRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKI 289 (294) Q Consensus 222 l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l 289 (294) +.++.+.+++++|..||+-+...-...+.|++.++...+..+..| ..+-+++++...+.| T Consensus 186 ~~ql~~~l~~~~i~~ifavt~~~~~~Y~~l~~~~~g~~~~~l~~d--------ssNi~~lI~~~y~~i 245 (248) T d1tyeb2 186 LGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMD--------SSNVLQLIVDAYGKI 245 (248) T ss_dssp HHHHHHHHHHTTEEEEEEECGGGHHHHHHHHHTSTTCEEEECSSC--------CHHHHHHHHHHHHTC T ss_pred HHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCC--------CHHHHHHHHHHHHHH T ss_conf 899999999829579999883156899999985698579870553--------444999999999987 No 9 >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} Probab=64.52 E-value=4 Score=18.09 Aligned_cols=28 Identities=11% Similarity=0.075 Sum_probs=12.3 Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 789999887610689999974235575211 Q gi|254780537|r 73 ADLILCNGLHLEETYMKYFTNLKKGTKIIT 102 (294) Q Consensus 73 Adliv~~G~~~E~~~~~~~~~~~~~~~~i~ 102 (294) .++|+ -+.|++..+.-.+... -..++|. T Consensus 57 ~~viI-a~AG~aa~Lpgvva~~-t~~PVIg 84 (155) T d1xmpa_ 57 LKVII-AGAGGAAHLPGMVAAK-TNLPVIG 84 (155) T ss_dssp CCEEE-EEEESSCCHHHHHHTT-CCSCEEE T ss_pred CEEEE-EECCCCCCCHHHHHHH-CCCEEEE T ss_conf 14887-5414677762578873-6600788 No 10 >d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Probab=62.72 E-value=2.4 Score=19.57 Aligned_cols=120 Identities=13% Similarity=0.198 Sum_probs=59.0 Q ss_pred CCCCCEEEEECHH--------HHHHHHHHCCCEEEEEEEECCCC----CCCCCC----------CCHHHHHHHCCCCEEE Q ss_conf 3588289997528--------99999985189148999626889----801202----------2712457760378999 Q gi|254780537|r 20 TTQKKVVLSSFSI--------IGDITQNIAKDLVTVTTLVEAGN----DSHSYQ----------VTSADAIKIQNADLIL 77 (294) Q Consensus 20 ~~~~~~Vv~s~~p--------l~~iv~~I~gd~v~V~~li~~g~----dpH~ye----------~tp~d~~~i~~Adliv 77 (294) .+++|.|++--.. +-.+++..+-.- +++.+..|. +|+.+= -++.-...+++||+++ T Consensus 18 ~AkrPvii~G~g~~~~~a~~~l~~lae~~~iPv--~~t~~~kg~~p~~hp~~~G~~~~~~~G~~~~~~~~~~l~~aDlvl 95 (177) T d2ihta1 18 EAKHPVLVVGAAAIRSGAVPAIRALAERLNIPV--ITTYIAKGVLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLVL 95 (177) T ss_dssp HCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCE--EECSTTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEE T ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEE--EECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEE T ss_conf 079979999968253426999999753155899--960544658998653342300002232212389998760677457 Q ss_pred EECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9887610689999974235575211123742022210012334630111221356789999999998643188 Q gi|254780537|r 78 CNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPS 150 (294) Q Consensus 78 ~~G~~~E~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~ 150 (294) ..|..+..+..........+.++|.+... +.... .....|--++-|+ ....+.+.+.+.+..+. T Consensus 96 ~vG~~~~~~~~~~~~~~~~~~k~I~Id~d--~~~i~----~~~~~~~~i~gD~---~~~l~~L~~~l~~~~~~ 159 (177) T d2ihta1 96 TVGYDYAEDLRPSMWQKGIEKKTVRISPT--VNPIP----RVYRPDVDVVTDV---LAFVEHFETATASFGAK 159 (177) T ss_dssp EETCCGGGCCCHHHHCCSSCCEEEEEESS--CCSCT----TTCCCSEEEESCH---HHHHHHHHHHTTTCCCC T ss_pred EECCCCCCCCCCCCCCCCCCCCEEEECCC--HHHHC----CCCCCCEEEEECH---HHHHHHHHHHHHHCCCC T ss_conf 86245455432354445776530487078--78928----8557874798589---99999999976636655 No 11 >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Probab=60.68 E-value=4.7 Score=17.64 Aligned_cols=19 Identities=16% Similarity=0.071 Sum_probs=9.8 Q ss_pred HHHHHHHCCCEEEEEEEEC Q ss_conf 9999985189148999626 Q gi|254780537|r 34 GDITQNIAKDLVTVTTLVE 52 (294) Q Consensus 34 ~~iv~~I~gd~v~V~~li~ 52 (294) +.+++.++.-..+|+.+.| T Consensus 23 ~~La~~L~~~Gh~V~Vvtp 41 (437) T d2bisa1 23 TAISEALASLGHEVLVFTP 41 (437) T ss_dssp HHHHHHHHHTTCEEEEEEE T ss_pred HHHHHHHHHCCCEEEEEEC T ss_conf 9999999976998999905 No 12 >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} Probab=60.44 E-value=4.7 Score=17.61 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=15.3 Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCCCCC Q ss_conf 7899998876106899999742355752111 Q gi|254780537|r 73 ADLILCNGLHLEETYMKYFTNLKKGTKIITV 103 (294) Q Consensus 73 Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~ 103 (294) .++|| -|.|++..+.-.+.... ..++|.+ T Consensus 56 ~~viI-a~AG~aa~LpgvvA~~t-~~PVIgv 84 (169) T d1o4va_ 56 IEVII-AGAGGAAHLPGMVASIT-HLPVIGV 84 (169) T ss_dssp CCEEE-EEEESSCCHHHHHHHHC-SSCEEEE T ss_pred CEEEE-EEECCCCCCHHHHHHHC-CEEEEEC T ss_conf 82899-96057767567888835-6148854 No 13 >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} Probab=60.30 E-value=3.7 Score=18.33 Aligned_cols=44 Identities=9% Similarity=0.116 Sum_probs=36.9 Q ss_pred CHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE Q ss_conf 78999999976201697189982789979999999982993444 Q gi|254780537|r 218 SPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGG 261 (294) Q Consensus 218 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 261 (294) .++.+.++.+.+.+.++++++.++...++.+..+|++.|++++. T Consensus 79 p~~~v~~~v~~~~~~g~k~i~~q~G~~~~e~~~~a~~~Gi~vV~ 122 (136) T d1iuka_ 79 PPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVA 122 (136) T ss_dssp CHHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCCEEE T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEC T ss_conf 47889999999985178859985585589999999995997993 No 14 >d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]} Probab=59.23 E-value=4.9 Score=17.47 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=30.0 Q ss_pred HHHHHHHHHHHCCCCCEE-EEEECCCCHHHHHHHHHHHCCCEEEEEE Q ss_conf 899999997620169718-9982789979999999982993444320 Q gi|254780537|r 219 PSMMRHAINQMRSHKIKF-IFSESTNSDQPAKQVAYETNASYGGVLY 264 (294) Q Consensus 219 ~~~l~~~~~~ik~~~v~~-if~e~~~~~~~~~~ia~e~~~~~~~~~~ 264 (294) ...|+.+++.+++.++++ +|.+| +.+.++. |+++|+..+++.+ T Consensus 112 ~~~L~~~i~~l~~~girvSLFiDp--d~~~i~~-a~~lGad~IElhT 155 (242) T d1m5wa_ 112 RDKMRDACKRLADAGIQVSLFIDA--DEEQIKA-AAEVGAPFIEIHT 155 (242) T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS--CHHHHHH-HHHTTCSEEEEEC T ss_pred HHHHHHHHHHHHHCCCEEEEEECC--CHHHHHH-HHHCCCCEEEEEC T ss_conf 889999999998669707999445--2465778-8642766355320 No 15 >d1r2ra_ c.1.1.1 (A:) Triosephosphate isomerase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Probab=56.32 E-value=5.5 Score=17.15 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=47.4 Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEEEEEC Q ss_conf 99886307844736998266521457752972887226886400078999999976201-----------6971899827 Q gi|254780537|r 173 LKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFIFSES 241 (294) Q Consensus 173 ~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~if~e~ 241 (294) ++..+..++..++.+++|.|.|. +.++..|+|.++.++...|++ .+++ |++.. T Consensus 145 l~~~l~~~~~~~~iiiAYEPvWA---------------IGTG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~-ilYGG 208 (246) T d1r2ra_ 145 TKVIADNVKDWSKVVLAYEPVWA---------------IGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTR-IIYGG 208 (246) T ss_dssp HHHHHHTCSCGGGEEEEECCGGG---------------SSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCC-EEECS T ss_pred HHHHHHCCCCCCEEEEECCCEEE---------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEECC T ss_conf 98876233434428996375653---------------268877660556666788777888765676538665-88608 Q ss_pred CCCHHHHHHHHHHHCCC Q ss_conf 89979999999982993 Q gi|254780537|r 242 TNSDQPAKQVAYETNAS 258 (294) Q Consensus 242 ~~~~~~~~~ia~e~~~~ 258 (294) ..+++-++.|.+.-++. T Consensus 209 SV~~~N~~~i~~~~~vD 225 (246) T d1r2ra_ 209 SVTGATCKELASQPDVD 225 (246) T ss_dssp CCCTTTHHHHHTSTTCC T ss_pred CCCHHHHHHHHCCCCCC T ss_conf 97987999995688989 No 16 >d1o5xa_ c.1.1.1 (A:) Triosephosphate isomerase {Plasmodium falciparum [TaxId: 5833]} Probab=56.29 E-value=5.5 Score=17.15 Aligned_cols=89 Identities=11% Similarity=0.207 Sum_probs=55.5 Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEEEEEC Q ss_conf 99886307844736998266521457752972887226886400078999999976201-----------6971899827 Q gi|254780537|r 173 LKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFIFSES 241 (294) Q Consensus 173 ~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~if~e~ 241 (294) ++..+..+...++.+++|.|.|. +.++..|++.++.++...|++ .++++ ++.. T Consensus 145 l~~~l~~~~~~~~iiIAYEPvWA---------------IGTG~~as~~~i~e~~~~Ir~~l~~~~~~~~~~~i~i-lYGG 208 (246) T d1o5xa_ 145 VKAFVDLIDNFDNVILVYEPLWA---------------IGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRI-LYGG 208 (246) T ss_dssp HHTTGGGCCCTTSEEEEECCGGG---------------SSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEE-EECS T ss_pred HHHHHHHHCCCCCEEEEECCCCC---------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE-EEEC T ss_conf 88654310355547999665001---------------2589876640110014677778877766754486428-9828 Q ss_pred CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 8997999999998299344432012378777886899999999 Q gi|254780537|r 242 TNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRF 284 (294) Q Consensus 242 ~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~ 284 (294) ..++.-++.|.+.-++.-. +.-.-+| + +++.++++. T Consensus 209 SV~~~N~~~i~~~~~idG~-LVG~ASL-----~-~~F~~Ii~~ 244 (246) T d1o5xa_ 209 SVNTENCSSLIQQEDIDGF-LVGNASL-----K-ESFVDIIKS 244 (246) T ss_dssp CCCTTTHHHHHTSTTCCEE-EECGGGG-----S-TTHHHHHHH T ss_pred CCCHHHHHHHHCCCCCCEE-EEECCCC-----C-HHHHHHHHH T ss_conf 9897599999568898979-9623208-----8-899999998 No 17 >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} Probab=54.69 E-value=5.8 Score=16.98 Aligned_cols=44 Identities=7% Similarity=0.114 Sum_probs=36.4 Q ss_pred CHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE Q ss_conf 78999999976201697189982789979999999982993444 Q gi|254780537|r 218 SPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGG 261 (294) Q Consensus 218 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 261 (294) .++.+.++.+.+.+.+++.++.++...+..+..++++.|+++++ T Consensus 65 p~~~~~~~l~~~~~~g~k~v~~~~g~~~~~~~~~a~~~gi~vig 108 (116) T d1y81a1 65 PPKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVEYSF 108 (116) T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCEEEC T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEEC T ss_conf 78999999999986699658850652119999999985998993 No 18 >d1m6ja_ c.1.1.1 (A:) Triosephosphate isomerase {Entamoeba histolytica [TaxId: 5759]} Probab=51.68 E-value=6.5 Score=16.67 Aligned_cols=59 Identities=12% Similarity=0.185 Sum_probs=44.3 Q ss_pred CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEEEEECCCCHHHHHHHH Q ss_conf 736998266521457752972887226886400078999999976201-----------697189982789979999999 Q gi|254780537|r 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFIFSESTNSDQPAKQVA 252 (294) Q Consensus 184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~if~e~~~~~~~~~~ia 252 (294) ++.+++|.|.|. +.++..|+|.++.++...|++ .+++ |++-...++.-+..+. T Consensus 166 ~~iiIAYEPvWA---------------IGTG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~-ilYGGSV~~~N~~~i~ 229 (260) T d1m6ja_ 166 KNIILAYEPVWA---------------IGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATR-IQYGGSVNPANCNELA 229 (260) T ss_dssp GGEEEEECCGGG---------------SSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSC-EEECSCCCTTTHHHHH T ss_pred HCCEEECCCEEC---------------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCC-EEECCCCCHHHHHHHH T ss_conf 150775163311---------------468865681777777788888988640532347774-8971898875999984 Q ss_pred HHHCCC Q ss_conf 982993 Q gi|254780537|r 253 YETNAS 258 (294) Q Consensus 253 ~e~~~~ 258 (294) +.-++. T Consensus 230 ~~~~vD 235 (260) T d1m6ja_ 230 KKADID 235 (260) T ss_dssp TSTTCC T ss_pred CCCCCC T ss_conf 778998 No 19 >d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Clostridium pasteurianum [TaxId: 1501]} Probab=48.51 E-value=7.3 Score=16.34 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=76.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC----HHHHHHC Q ss_conf 2135678999999999864318-889-999998998630145533789988630784473699826652----1457752 Q gi|254780537|r 128 MSLTNAMIYIENIRKALTALDP-SNA-KKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCL----VYLAEDF 201 (294) Q Consensus 128 ldp~~~~~~a~~I~~~L~~~dP-~~~-~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af----~Y~~~~y 201 (294) +.+.........|++.+..-++ +.. +.+.+... ++.+....++..+. .+|.++..-+.. .-|.+++ T Consensus 286 ~G~~~T~~~Lr~ia~~~g~~~~~~~~ee~I~~e~~----~~~~~l~~~~~~L~----GKrv~i~~g~~~~~~~~~~l~el 357 (525) T d1mioa_ 286 IGVDGIVETLRDMAKCFDDPELTKRTEEVIAEEIA----AIQDDLDYFKEKLQ----GKTACLYVGGSRSHTYMNMLKSF 357 (525) T ss_dssp SSHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHT----TCEEEEEESSSHHHHHHHHHHHH T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHC----CCCEEEECCCHHHHHHHHHHHHC T ss_conf 66033799999999983995056789999999999----99999999997607----98658836853789999999986 Q ss_pred CCEEEEECC-CCCCCC----------------------------------C----------------------------- Q ss_conf 972887226-886400----------------------------------0----------------------------- Q gi|254780537|r 202 GFKSLYLWP-INSDSE----------------------------------R----------------------------- 217 (294) Q Consensus 202 Gl~~~~~~~-~~~~~e----------------------------------p----------------------------- 217 (294) |++++..-. ..+..+ . T Consensus 358 Gmevv~~g~~~~h~dd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (525) T d1mioa_ 358 GVDSLVAGFEFAHRDDYEGREVIPTIKIDADSKNIPEITVTPDEQKYRVVIPEDKVEELKKAGVPLSSYGGMMKEMHDGT 437 (525) T ss_dssp TCEEEEEEESSCCHHHHHCGGGTTTCCCCSSCCCCCCCCCCCCSSSCCCSSCTHHHHHHHGGGCCBTCCCCGGGTSCTTE T ss_pred CCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCC T ss_conf 99699854531443124443202321111012343100135431001334316677766430000111223343237776 Q ss_pred ---CHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf ---7899999997620169718998278997999999998299344432012378777886899999999999998620 Q gi|254780537|r 218 ---SPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294) Q Consensus 218 ---s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294) .-.+..++.+.|++.++..+|.. ..-+.+|+..|++...+..-|-.+ +--.|-+++ +-.+.|..+| T Consensus 438 ~iidd~~~~el~~~i~~~~pDLiig~-----~~ek~~a~klgiP~~~~~~~dr~g----py~GY~G~~-~fa~~i~~~l 506 (525) T d1mioa_ 438 ILIDDMNHHDMEVVLEKLKPDMFFAG-----IKEKFVIQKGGVLSKQLHSYDYNG----PYAGFRGVV-NFGHELVNGI 506 (525) T ss_dssp EEEESCBHHHHHHHHHHHCCSEEEEC-----HHHHHHHHHTTCEEEETTTTTSCC----CCSSSHHHH-HHHHHHHHHH T ss_pred EEECCCCHHHHHHHHHHCCCCEEEEC-----CCHHHHHHHCCCCEEECCCCCCCC----CCCCHHHHH-HHHHHHHHHH T ss_conf 78517998999999976499999967-----730698998299874178344688----864678899-9999999987 No 20 >d1mo0a_ c.1.1.1 (A:) Triosephosphate isomerase {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Probab=47.57 E-value=7.5 Score=16.25 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=47.1 Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEEEEC Q ss_conf 998863078447369982665214577529728872268864000789999999762016-----------971899827 Q gi|254780537|r 173 LKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIFSES 241 (294) Q Consensus 173 ~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if~e~ 241 (294) +...+......++.+|+|.|.|. +..+..|++.++.++...||+. +++++ +.. T Consensus 154 l~~~~~~~~~~~~iiIAYEPvWA---------------IGtG~~a~~~~i~e~~~~Ir~~l~~~~~~~~~~~~~iL-YGG 217 (257) T d1mo0a_ 154 LQAIVDKGVSWENIVIAYEPVWA---------------IGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRII-YGG 217 (257) T ss_dssp HHHHHTTTCCSTTEEEEECCGGG---------------TTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEE-EES T ss_pred HHCCCCCCCCCCCEEEEECCHHH---------------CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEE-EEC T ss_conf 32111111255551898665421---------------36554456566656788899999986177560766588-628 Q ss_pred CCCHHHHHHHHHHHCCC Q ss_conf 89979999999982993 Q gi|254780537|r 242 TNSDQPAKQVAYETNAS 258 (294) Q Consensus 242 ~~~~~~~~~ia~e~~~~ 258 (294) ..++.-++.|.+.-++. T Consensus 218 SV~~~N~~~i~~~~~vD 234 (257) T d1mo0a_ 218 SVTADNAAELGKKPDID 234 (257) T ss_dssp SCCTTTHHHHTTSTTCC T ss_pred CCCHHHHHHHHCCCCCC T ss_conf 85987999995688988 No 21 >d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Probab=46.78 E-value=7.7 Score=16.17 Aligned_cols=136 Identities=13% Similarity=0.110 Sum_probs=63.0 Q ss_pred CCCCCEEEEECH------HHHHHHHHHCCCEEEEEEEECCCC----CCCCC-----CCCHHHHHHHCCCCEEEEECCCCC Q ss_conf 358828999752------899999985189148999626889----80120-----227124577603789999887610 Q gi|254780537|r 20 TTQKKVVLSSFS------IIGDITQNIAKDLVTVTTLVEAGN----DSHSY-----QVTSADAIKIQNADLILCNGLHLE 84 (294) Q Consensus 20 ~~~~~~Vv~s~~------pl~~iv~~I~gd~v~V~~li~~g~----dpH~y-----e~tp~d~~~i~~Adliv~~G~~~E 84 (294) .+.+|.+++--. -+..|++.++-.- ++++...|. +|+.. ..++...+.+++||+++..|..|. T Consensus 20 ~Ak~Pvii~G~g~~~a~~~l~~lae~l~~Pv--~~t~~~~g~ip~~hp~~~G~~g~~~~~~~~~~l~~aDlvi~lG~~~~ 97 (177) T d2djia1 20 NSKRPVIYAGIGTMGHGPAVQELARKIKAPV--ITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFP 97 (177) T ss_dssp TCSSEEEEECGGGTTCHHHHHHHHHHHTCCE--EECTTCGGGSCTTCTTBCCCSSSSSCHHHHHHHHHCSEEEEESCCCT T ss_pred HCCCEEEEECCCHHHHHHHHHHHHHCCCEEE--EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC T ss_conf 3899799989476458999998541343379--95233443334444433332223467544213314674588502578 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH Q ss_conf 6899999742355752111237420222100123346301112213567899999999986431888-999999899863 Q gi|254780537|r 85 ETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSN-AKKYELNAREYS 163 (294) Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~-~~~y~~N~~~~~ 163 (294) .... .....++.++|-+.. ++. ........|-.++=|+.. ..+.+.+.|....+.. .....++.+.+. T Consensus 98 ~~~~--~~~~~~~~kiI~Id~--d~~----~i~~~~~~d~~i~gD~~~---~L~~L~~~l~~~~~~~~~~~~~~~~~~w~ 166 (177) T d2djia1 98 FSEV--EGTFRNVDNFIQIDI--DPA----MLGKRHHADVAILGDAAL---AIDEILNKVDAVEESAWWTANLKNIANWR 166 (177) T ss_dssp TTTT--TTTTTTCSEEEEEES--CGG----GTTSSSCCSEEEESCHHH---HHHHHHHHSCCCCCCHHHHHHHHHHHHHH T ss_pred CCCC--EECCCCCCCHHEEEE--CCC----CCCCCCCCCEEEEECHHH---HHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 7541--100023660006774--652----258754673589859999---99999986422557478999999999999 Q ss_pred CCHHH Q ss_conf 01455 Q gi|254780537|r 164 EKIRN 168 (294) Q Consensus 164 ~~l~~ 168 (294) +.++. T Consensus 167 e~i~~ 171 (177) T d2djia1 167 EYINM 171 (177) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 99876 No 22 >d1neya_ c.1.1.1 (A:) Triosephosphate isomerase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=45.95 E-value=7.9 Score=16.08 Aligned_cols=69 Identities=12% Similarity=0.168 Sum_probs=46.9 Q ss_pred HHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEEEEECC Q ss_conf 9886307844736998266521457752972887226886400078999999976201-----------69718998278 Q gi|254780537|r 174 KTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFIFSEST 242 (294) Q Consensus 174 ~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~if~e~~ 242 (294) +..+..+...++.+++|.|.|. +.++..|+|.++.++..+|++ .+++.+ +... T Consensus 147 ~~~l~~~~~~~~iiIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~iL-YGGS 210 (247) T d1neya_ 147 NAVLEEVKDFTNVVVAYEPVWA---------------IGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRIL-YGGS 210 (247) T ss_dssp HHHHHHCCCCTTEEEEECCGGG---------------TTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEE-EESS T ss_pred HHHHCCCCCCCCEEEEECCHHC---------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-EECC T ss_conf 8653344432446998565101---------------46776667266654567888899876323114667489-8078 Q ss_pred CCHHHHHHHHHHHCCC Q ss_conf 9979999999982993 Q gi|254780537|r 243 NSDQPAKQVAYETNAS 258 (294) Q Consensus 243 ~~~~~~~~ia~e~~~~ 258 (294) .+++-++.|.+.-++. T Consensus 211 V~~~N~~~i~~~~~iD 226 (247) T d1neya_ 211 ANGSNAVTFKDKADVD 226 (247) T ss_dssp CCTTTGGGGTTCTTCC T ss_pred CCHHHHHHHHCCCCCC T ss_conf 8888999996688988 No 23 >d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} Probab=44.05 E-value=8.5 Score=15.89 Aligned_cols=55 Identities=13% Similarity=0.077 Sum_probs=23.3 Q ss_pred EEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCC Q ss_conf 48999626889801202271245776037899998876106899999742355752111 Q gi|254780537|r 45 VTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKIITV 103 (294) Q Consensus 45 v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~ 103 (294) .++. ++-....||...--.+..+. ++.++|+. |.|+...+.-.+.... ..++|.+ T Consensus 31 ~e~~-v~SAHRtp~~l~~~~~~~~~-~~~~ViIa-~AG~aa~LpgvvA~~t-~~PVIgV 85 (163) T d1qcza_ 31 HHVE-VVSAHRTPDKLFSFAESAEE-NGYQVIIA-GAGGAAHLPGMIAAKT-LVPVLGV 85 (163) T ss_dssp EEEE-ECCTTTCHHHHHHHHHHTTT-TTCSEEEE-EECSSCCHHHHHHHSC-SSCEEEE T ss_pred EEEE-EECCCCCHHHHHHHHHHHHH-CCCEEEEE-ECCCCCCCCCHHHHHC-CCEEEEC T ss_conf 6999-84220488999999999997-49769998-5268876520466734-4114511 No 24 >d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Probab=40.54 E-value=9.5 Score=15.54 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=22.1 Q ss_pred HHHHCCCCEEEEECCCCCH--HHHHHHHHCCCCCCCCCC Q ss_conf 5776037899998876106--899999742355752111 Q gi|254780537|r 67 AIKIQNADLILCNGLHLEE--TYMKYFTNLKKGTKIITV 103 (294) Q Consensus 67 ~~~i~~Adliv~~G~~~E~--~~~~~~~~~~~~~~~i~~ 103 (294) ++.+.+|||++..|..|.. ..........++.+++.+ T Consensus 87 ~~~~~~aDLvi~iG~~~~~~~~~~~~~~~~~~~~k~I~I 125 (158) T d1ytla1 87 FDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALAI 125 (158) T ss_dssp TTSSCCCSEEEEESCCHHHHHHHHHHHHHHCTTCEEEEC T ss_pred HHCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCEEEEE T ss_conf 630367688999777246231124651114888858987 No 25 >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} Probab=38.68 E-value=10 Score=15.35 Aligned_cols=149 Identities=15% Similarity=0.158 Sum_probs=82.7 Q ss_pred EEECHHHHHHHHHHCC---CEEEEEEEECCCCCCCCCCCCHHHHHH-H--CCCCEEEEECCCCCHHHHHHHHHCCCCCCC Q ss_conf 9975289999998518---914899962688980120227124577-6--037899998876106899999742355752 Q gi|254780537|r 27 LSSFSIIGDITQNIAK---DLVTVTTLVEAGNDSHSYQVTSADAIK-I--QNADLILCNGLHLEETYMKYFTNLKKGTKI 100 (294) Q Consensus 27 v~s~~pl~~iv~~I~g---d~v~V~~li~~g~dpH~ye~tp~d~~~-i--~~Adliv~~G~~~E~~~~~~~~~~~~~~~~ 100 (294) ..|++-|..+.+.|++ +..++..+-. .|+=....+++ + .+.|+|+.-|.. ..++++. -+.++ T Consensus 6 ~~~~srL~~l~~~i~~ey~~~~~i~v~~~------~~e~av~~~~~~~~~~~~DviISRG~t-----a~~ir~~-~~iPV 73 (186) T d2pjua1 6 TVSVTRLFELFRDISLEFDHLANITPIQL------GFEKAVTYIRKKLANERCDAIIAAGSN-----GAYLKSR-LSVPV 73 (186) T ss_dssp EECCHHHHHHHHHHHTTTTTTCEEEEECC------CHHHHHHHHHHHTTTSCCSEEEEEHHH-----HHHHHTT-CSSCE T ss_pred EEEHHHHHHHHHHHHHHHCCCCEEEEECC------CHHHHHHHHHHHHHCCCCCEEEECCHH-----HHHHHHH-CCCCE T ss_conf 98889999999999997258862996507------478899999999870899899979638-----9999986-89987 Q ss_pred CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC Q ss_conf 11123742022210012334630111221356789999999998643188899999989986301455337899886307 Q gi|254780537|r 101 ITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKV 180 (294) Q Consensus 101 i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~ 180 (294) +.+.- .++ | |-.+| . ..... T Consensus 74 V~I~v--------------s~~------D----------il~al-----------------------------~-~a~~~ 93 (186) T d2pjua1 74 ILIKP--------------SGY------D----------VLQFL-----------------------------A-KAGKL 93 (186) T ss_dssp EEECC--------------CHH------H----------HHHHH-----------------------------H-HTTCT T ss_pred EEECC--------------CHH------H----------HHHHH-----------------------------H-HHHHH T ss_conf 99708--------------876------8----------99999-----------------------------9-99975 Q ss_pred CCCCCEEEEECC----CCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHC Q ss_conf 844736998266----5214577529728872268864000789999999762016971899827899799999999829 Q gi|254780537|r 181 DPEKRWFVTSEG----CLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETN 256 (294) Q Consensus 181 p~~~~~~v~~H~----af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~ 256 (294) .++.-++.|+ .+.-|++-+|++..-.. --++.++...++.+++.|+++|.. +..+-.+|++.| T Consensus 94 --~~kiavV~~~~~~~~~~~~~~ll~~~i~~~~------~~~~~e~~~~v~~l~~~G~~vVVG-----~~~~~~~A~~~G 160 (186) T d2pjua1 94 --TSSIGVVTYQETIPALVAFQKTFNLRLDQRS------YITEEDARGQINELKANGTEAVVG-----AGLITDLAEEAG 160 (186) T ss_dssp --TSCEEEEEESSCCHHHHHHHHHHTCCEEEEE------ESSHHHHHHHHHHHHHTTCCEEEE-----SHHHHHHHHHTT T ss_pred --CCCEEEEECCCCCHHHHHHHHHHCCCEEEEE------ECCHHHHHHHHHHHHHCCCCEEEC-----CHHHHHHHHHCC T ss_conf --8978999177625699999999599648999------638899999999999879989999-----859999999849 Q ss_pred CCEE Q ss_conf 9344 Q gi|254780537|r 257 ASYG 260 (294) Q Consensus 257 ~~~~ 260 (294) .+.+ T Consensus 161 l~~v 164 (186) T d2pjua1 161 MTGI 164 (186) T ss_dssp SEEE T ss_pred CCEE T ss_conf 9789 No 26 >d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus stearothermophilus [TaxId: 1422]} Probab=36.50 E-value=11 Score=15.12 Aligned_cols=59 Identities=12% Similarity=0.161 Sum_probs=43.3 Q ss_pred CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-----------CCCEEEEEECCCCHHHHHHHH Q ss_conf 736998266521457752972887226886400078999999976201-----------697189982789979999999 Q gi|254780537|r 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS-----------HKIKFIFSESTNSDQPAKQVA 252 (294) Q Consensus 184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~-----------~~v~~if~e~~~~~~~~~~ia 252 (294) ++.+++|.|.|. +.++..|++.++.++...|++ .+++. ++....++.-++.|. T Consensus 159 ~~iiIAYEPvWA---------------IGTG~~a~~~~i~e~~~~Ir~~l~~~~~~~~~~~i~i-lYGGSV~~~N~~~i~ 222 (251) T d2btma_ 159 KQAVIAYEPIWA---------------IGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRI-QYGGSVKPDNIRDFL 222 (251) T ss_dssp TTCEEEECCGGG---------------TTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEE-EEESSCCTTTHHHHH T ss_pred CEEEEEECCCCC---------------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCE-EEECCCCHHHHHHHH T ss_conf 328998663012---------------4556678826666668999999986406334165858-850897986999996 Q ss_pred HHHCCC Q ss_conf 982993 Q gi|254780537|r 253 YETNAS 258 (294) Q Consensus 253 ~e~~~~ 258 (294) +.-++. T Consensus 223 ~~~~vD 228 (251) T d2btma_ 223 AQQQID 228 (251) T ss_dssp TSTTCC T ss_pred CCCCCC T ss_conf 688999 No 27 >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} Probab=35.11 E-value=12 Score=14.98 Aligned_cols=31 Identities=6% Similarity=0.063 Sum_probs=16.7 Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCC Q ss_conf 037899998876106899999742355752111 Q gi|254780537|r 71 QNADLILCNGLHLEETYMKYFTNLKKGTKIITV 103 (294) Q Consensus 71 ~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i~~ 103 (294) .+.++||.. .|++..+.-.+.... ..++|.+ T Consensus 56 ~~~~viIa~-AG~aaaLpgvva~~t-~~PVIgv 86 (159) T d1u11a_ 56 RGLNVIIAG-AGGAAHLPGMCAAWT-RLPVLGV 86 (159) T ss_dssp TTCCEEEEE-EESSCCHHHHHHHHC-SSCEEEE T ss_pred CCCEEEEEE-ECCCCCCCCCEEEEC-CEEEEEE T ss_conf 597489987-158887766332213-5057885 No 28 >d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Probab=34.64 E-value=12 Score=14.93 Aligned_cols=71 Identities=15% Similarity=0.274 Sum_probs=39.4 Q ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCC---------CCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC Q ss_conf 2899999985189148999626889801202---------2712457760378999988761068999997423557521 Q gi|254780537|r 31 SIIGDITQNIAKDLVTVTTLVEAGNDSHSYQ---------VTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTKII 101 (294) Q Consensus 31 ~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye---------~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~~i 101 (294) .-+..|++.++-.- +++....|.=|.+.. -++.-...+++||+++..|..|..+..........+.++| T Consensus 35 ~~l~~lae~~~~Pv--~tt~~~~g~~~~~h~~~~G~~G~~g~~~~~~~~~~aDlil~lG~~l~~~~~~~~~~~~~~~kiI 112 (179) T d1ybha1 35 DELGRFVELTGIPV--ASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIV 112 (179) T ss_dssp HHHHHHHHHHCCCE--EECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHHHHSSGGGTTTTSEEE T ss_pred HHHHHHHHHHCCCC--EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE T ss_conf 99999876534242--0045666777643333444578868899999997544543203665632246423367778599 Q ss_pred CC Q ss_conf 11 Q gi|254780537|r 102 TV 103 (294) Q Consensus 102 ~~ 103 (294) -+ T Consensus 113 ~I 114 (179) T d1ybha1 113 HI 114 (179) T ss_dssp EE T ss_pred EE T ss_conf 99 No 29 >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Probab=34.03 E-value=12 Score=14.86 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=16.3 Q ss_pred HHHHHHH----HCCCEEEEEEEECCCCC----------CCCCCCC Q ss_conf 9999998----51891489996268898----------0120227 Q gi|254780537|r 33 IGDITQN----IAKDLVTVTTLVEAGND----------SHSYQVT 63 (294) Q Consensus 33 l~~iv~~----I~gd~v~V~~li~~g~d----------pH~ye~t 63 (294) +.+|+++ |+.-.++..=|.|+..+ -|-|+|+ T Consensus 21 ~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~ 65 (403) T d1hx0a2 21 WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPV 65 (403) T ss_dssp HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBS T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCC T ss_conf 899999999999981998799496815766788999876003687 No 30 >d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Probab=33.19 E-value=12 Score=14.77 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=31.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH Q ss_conf 35678999999999864318889999998998630145 Q gi|254780537|r 130 LTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIR 167 (294) Q Consensus 130 p~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~ 167 (294) -...+.+...|...|.+..|+.-+.|.+|+..+.+.+. T Consensus 85 ~~yiK~YmK~vk~~L~e~~perv~~Fk~~a~~~vK~Il 122 (168) T d1h6qa_ 85 MSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKIL 122 (168) T ss_dssp HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999864088899999986799999998 No 31 >d1xg7a_ a.96.1.6 (A:) Hypothetical protein PF0904 {Pyrococcus furiosus [TaxId: 2261]} Probab=32.86 E-value=8.3 Score=15.95 Aligned_cols=95 Identities=9% Similarity=0.049 Sum_probs=55.4 Q ss_pred HHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCC--CCHHHHHHHHHHHCCCCC Q ss_conf 989986301455337899886307844736998266521457752972887226886400--078999999976201697 Q gi|254780537|r 157 LNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSE--RSPSMMRHAINQMRSHKI 234 (294) Q Consensus 157 ~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~e--ps~~~l~~~~~~ik~~~v 234 (294) ++++.|...+..+-..+...+.+ +...+++|-.---|+|.++--|-+.... |+.= |--.+++.+...+.+ T Consensus 120 ~~~~~yy~~m~~l~~~LA~~l~~-~~~~KTIVFAvKM~gYA~r~~~~~~~p~----p~eIpIPvD~RI~~~t~~~~~--- 191 (245) T d1xg7a_ 120 KDLEGYYKNMKMLWKALIKIMGS-REDSKTIVFTVKMFGYASRIAFSRFIPY----PMEIPIPEDLRIKSVTSKLTQ--- 191 (245) T ss_dssp HHHHHHHHTHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHTTSCCCC----CTTSCCCCCHHHHHHHHTTCS--- T ss_pred HHHHHHHHHHHHHHHHHHHHHCC-CCCCCEEEEHHHHHHHHHHHHCCCCCCC----CCCCCCCCHHHHHHHHHCCCC--- T ss_conf 67889985399999999999689-9875634326998999999954778789----878999621899999720230--- Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCC Q ss_conf 18998278997999999998299344432012378 Q gi|254780537|r 235 KFIFSESTNSDQPAKQVAYETNASYGGVLYVDSLS 269 (294) Q Consensus 235 ~~if~e~~~~~~~~~~ia~e~~~~~~~~~~~d~l~ 269 (294) ....+....+++++|++ .+.+|++- T Consensus 192 -------e~~~~fW~~Vak~~~IP---pLHLDSil 216 (245) T d1xg7a_ 192 -------EKPTKFWMKIGQESGVP---PLHIDSLI 216 (245) T ss_dssp -------SCHHHHHHHHHHHHTCC---HHHHHHHH T ss_pred -------HHHHHHHHHHHHCCCCC---CCHHHHHH T ss_conf -------14999999998624998---21027789 No 32 >d1trea_ c.1.1.1 (A:) Triosephosphate isomerase {Escherichia coli [TaxId: 562]} Probab=31.63 E-value=13 Score=14.61 Aligned_cols=59 Identities=8% Similarity=0.124 Sum_probs=43.6 Q ss_pred CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC----------CCCEEEEEECCCCHHHHHHHHH Q ss_conf 736998266521457752972887226886400078999999976201----------6971899827899799999999 Q gi|254780537|r 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRS----------HKIKFIFSESTNSDQPAKQVAY 253 (294) Q Consensus 184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~----------~~v~~if~e~~~~~~~~~~ia~ 253 (294) ++.+++|.|.|. +.++..|++.++.++...+++ +++++ ++....++.-+..+.+ T Consensus 160 ~~iiIAYEPvWA---------------IGtG~~a~~~~~~~~~~~ir~~l~~~~~~~~~~v~i-LYGGSV~~~N~~~i~~ 223 (255) T d1trea_ 160 EGAVIAYEPVWA---------------IGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVII-QYGGSVNASNAAELFA 223 (255) T ss_dssp TTCEEEECCGGG---------------SSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE-EECSCCCTTTHHHHHT T ss_pred CCCEEEECCHHH---------------CCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCE-EECCCCCHHHHHHHHC T ss_conf 670799651653---------------155546674102456788888886403222377518-8617868738999966 Q ss_pred HHCCC Q ss_conf 82993 Q gi|254780537|r 254 ETNAS 258 (294) Q Consensus 254 e~~~~ 258 (294) .-++. T Consensus 224 ~~~vd 228 (255) T d1trea_ 224 QPDID 228 (255) T ss_dssp STTCC T ss_pred CCCCC T ss_conf 88998 No 33 >d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]} Probab=30.97 E-value=13 Score=14.53 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=30.3 Q ss_pred HHHHHHHHHHHCCC-CCEEEEEECCCCHHHHHHHHHH-HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 89999999762016-9718998278997999999998-299344432012378777886899999999999998620 Q gi|254780537|r 219 PSMMRHAINQMRSH-KIKFIFSESTNSDQPAKQVAYE-TNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 (294) Q Consensus 219 ~~~l~~~~~~ik~~-~v~~if~e~~~~~~~~~~ia~e-~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL 293 (294) +.++.+.++.+|+. +++++.-=.-.+++.++.+.+- +..=+++--.++.+.+... ...+++.+..-++.|++|| T Consensus 185 ~~~~~~~i~~ik~~t~~Pi~vGFGI~~~e~v~~~~~~gaDGvIVGSaiv~~i~~~~~-~~~~~~~~~~~~~~lk~al 260 (261) T d1rd5a_ 185 NPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAAS-PKQGLRRLEEYARGMKNAL 260 (261) T ss_dssp CTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSS-HHHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHH T ss_conf 157999998762036787699817799999999986599999988899999997578-7899999999999999862 No 34 >d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Probab=30.69 E-value=14 Score=14.50 Aligned_cols=63 Identities=13% Similarity=0.211 Sum_probs=36.7 Q ss_pred CCCCEEEEE------CHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC---------CCHHHHHHHCCCCEEEEECCCCCH Q ss_conf 588289997------52899999985189148999626889801202---------271245776037899998876106 Q gi|254780537|r 21 TQKKVVLSS------FSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQ---------VTSADAIKIQNADLILCNGLHLEE 85 (294) Q Consensus 21 ~~~~~Vv~s------~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye---------~tp~d~~~i~~Adliv~~G~~~E~ 85 (294) +++|.|++- -.-+..|++.++-.- +++....|.=|+++. -++.-...+++||+++..|..|.. T Consensus 30 A~rPvii~G~G~~~a~~~l~~lae~~~~Pv--~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~ 107 (183) T d2ez9a1 30 AERPLIYYGIGARKAGKELEQLSKTLKIPL--MSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPF 107 (183) T ss_dssp CSSEEEEECGGGTTCHHHHHHHHHHHTCCE--EECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTT T ss_pred CCCEEEEECCCCCCCHHHHHHHHHCCCEEE--EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCC T ss_conf 799399983780635499998764043379--862145544323476433332234667777666246745886214675 No 35 >d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Probab=30.50 E-value=14 Score=14.48 Aligned_cols=63 Identities=11% Similarity=0.185 Sum_probs=37.6 Q ss_pred CCCCCEEEEEC--------HHHHHHHHHHCCCEEEEEEEECCCCCCCC--CCCCHHHHHHHCCCCEEEEECCCCC Q ss_conf 35882899975--------28999999851891489996268898012--0227124577603789999887610 Q gi|254780537|r 20 TTQKKVVLSSF--------SIIGDITQNIAKDLVTVTTLVEAGNDSHS--YQVTSADAIKIQNADLILCNGLHLE 84 (294) Q Consensus 20 ~~~~~~Vv~s~--------~pl~~iv~~I~gd~v~V~~li~~g~dpH~--ye~tp~d~~~i~~Adliv~~G~~~E 84 (294) .+++|.|++-- ..+..+++..+-.- +++....|.=|++ +-..+.-...+.+||+++..|..|. T Consensus 18 ~A~rPvii~G~g~~~~~a~~~l~~lae~~~iPv--~~t~~~~g~~~~~h~~~~~~~~~~~l~~aDlii~vG~~~~ 90 (175) T d2ji7a1 18 NAKRPVIMLGKGAAYAQCDDEIRALVEETGIPF--LPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLN 90 (175) T ss_dssp TCSSCEEEECHHHHHTTCHHHHHHHHHHHTCCE--EECTTTBTTBCTTCTTBCGGGHHHHHHHCSEEEEESCCSS T ss_pred HCCCEEEEECCCCCCCCCHHHHHHHHHHCEEEE--ECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC T ss_conf 489989998879241102799999765304102--1234223568875433222110112311231013512578 No 36 >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} Probab=29.34 E-value=14 Score=14.35 Aligned_cols=45 Identities=13% Similarity=0.122 Sum_probs=35.5 Q ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE Q ss_conf 078999999976201697189982789979999999982993444 Q gi|254780537|r 217 RSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGG 261 (294) Q Consensus 217 ps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 261 (294) ..++.+.++.+.+.+.+++++...+..-+..+..++++.|+.+++ T Consensus 82 vp~~~~~~~~~e~~~~g~k~v~~~~G~~~ee~~~~a~~~gi~vig 126 (139) T d2d59a1 82 VKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVA 126 (139) T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEEE T ss_pred ECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEC T ss_conf 388997889999997099999994264399999999997998895 No 37 >d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Probab=28.74 E-value=15 Score=14.28 Aligned_cols=84 Identities=8% Similarity=-0.043 Sum_probs=41.7 Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCH-----HHHHHCCCEEEEECCCCCCCCCCH Q ss_conf 643188899999989986301455337899886307844736998266521-----457752972887226886400078 Q gi|254780537|r 145 TALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLV-----YLAEDFGFKSLYLWPINSDSERSP 219 (294) Q Consensus 145 ~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~-----Y~~~~yGl~~~~~~~~~~~~eps~ 219 (294) .-+.|..+-....+.+++.-+++...+......+-+....+.--++||++. .+++++--..-++..+ +..-+. T Consensus 246 ~~l~p~~a~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf--~~~g~~ 323 (398) T d1qgna_ 246 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSF--EVDGDL 323 (398) T ss_dssp CCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEE--EESSCH T ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCEEEE--EECCCH T ss_conf 748979999998333477889999889999999999739882005788888993365554325898720466--643999 Q ss_pred HHHHHHHHHHC Q ss_conf 99999997620 Q gi|254780537|r 220 SMMRHAINQMR 230 (294) Q Consensus 220 ~~l~~~~~~ik 230 (294) ....++.+.+| T Consensus 324 ~~a~~f~~~L~ 334 (398) T d1qgna_ 324 LTTAKFVDALK 334 (398) T ss_dssp HHHHHHHHHCS T ss_pred HHHHHHHHCCC T ss_conf 99999997288 No 38 >d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]} Probab=25.39 E-value=17 Score=13.89 Aligned_cols=59 Identities=10% Similarity=0.195 Sum_probs=42.6 Q ss_pred CCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC-----------CCEEEEEECCCCHHHHHHHH Q ss_conf 7369982665214577529728872268864000789999999762016-----------97189982789979999999 Q gi|254780537|r 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSH-----------KIKFIFSESTNSDQPAKQVA 252 (294) Q Consensus 184 ~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia 252 (294) ++.+++|.|.|. +..+..|++.++.++..+|++. +++. ++....+++-++.+. T Consensus 159 ~~iiIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~~~i-lYGGSV~~~N~~~i~ 222 (249) T d1kv5a_ 159 AKVVIAYEPVWA---------------IGTGKVATPQQAQEAHALISSWVSSKIGADVAGELRI-LYGGSVNGKNARTLY 222 (249) T ss_dssp GGEEEEECCGGG---------------SSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCE-EEESSCCTTTHHHHH T ss_pred CCEEEECCCEEC---------------CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCE-EECCCCCHHHHHHHH T ss_conf 245885175211---------------3655555523555566777788887507434377748-971897986999996 Q ss_pred HHHCCC Q ss_conf 982993 Q gi|254780537|r 253 YETNAS 258 (294) Q Consensus 253 ~e~~~~ 258 (294) +.-++. T Consensus 223 ~~~~vD 228 (249) T d1kv5a_ 223 QQRDVN 228 (249) T ss_dssp TSTTCC T ss_pred CCCCCC T ss_conf 688999 No 39 >d2fdsa1 c.1.2.3 (A:1-324) Protozoan orotidine monophosphate decarboxylase {Plasmodium berghei [TaxId: 5821]} Probab=25.03 E-value=2.8 Score=19.16 Aligned_cols=12 Identities=8% Similarity=-0.352 Sum_probs=6.4 Q ss_pred CEEEEECCCCHH Q ss_conf 369982665214 Q gi|254780537|r 185 RWFVTSEGCLVY 196 (294) Q Consensus 185 ~~~v~~H~af~Y 196 (294) -..+|-|+..|+ T Consensus 161 aD~lTVh~~~G~ 172 (324) T d2fdsa1 161 SDSCTINVYMGT 172 (324) T ss_dssp CSEEEECCTTCS T ss_pred CCEEEECCCCCH T ss_conf 767986156748 No 40 >d1riqa1 a.203.1.1 (A:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]} Probab=24.83 E-value=17 Score=13.82 Aligned_cols=71 Identities=10% Similarity=0.151 Sum_probs=46.1 Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCE Q ss_conf 78999999999864318889-------9999989986301455337899886307844736998266521457752972 Q gi|254780537|r 133 AMIYIENIRKALTALDPSNA-------KKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFK 204 (294) Q Consensus 133 ~~~~a~~I~~~L~~~dP~~~-------~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~Y~~~~yGl~ 204 (294) ...++..+.+.+...+|+-. +....--+.|.+-|+.-...+...++....++...+...++| .+-+.|||. T Consensus 80 l~~lv~~v~~~~~~~ypel~~~~~~I~~ii~~EE~~f~~tl~~G~~~~~~~i~~~~~~~~~~l~g~~af-~LydTyGfP 157 (221) T d1riqa1 80 LYKGVDLVVDIMKEPYPELELSREFVKGIVKGEEKRFIKTLKAGMEYIQEVIQKALEEGRKTLSGKEVF-TAYDTYGFP 157 (221) T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHH-HHHHTSCCC T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHCCCCC T ss_conf 456689999985100100021799999999999999999999998889999998875278888999999-998702568 No 41 >d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]} Probab=24.73 E-value=17 Score=13.81 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=31.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH Q ss_conf 35678999999999864318889999998998630145 Q gi|254780537|r 130 LTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIR 167 (294) Q Consensus 130 p~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~ 167 (294) -...+.+...|...|.+..|+.-+.|.+++..+.+.+. T Consensus 88 ~~yiK~YmK~v~~~L~e~~perV~~Fk~~a~~~vK~Il 125 (171) T d1txja_ 88 SVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHIL 125 (171) T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999998764097789999987899999998 No 42 >d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} Probab=24.64 E-value=17 Score=13.80 Aligned_cols=39 Identities=8% Similarity=0.146 Sum_probs=26.9 Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH Q ss_conf 9999998-64318889999998998630145533789988 Q gi|254780537|r 138 ENIRKAL-TALDPSNAKKYELNAREYSEKIRNSILPLKTR 176 (294) Q Consensus 138 ~~I~~~L-~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~ 176 (294) ..+++.+ .-+.|..+-....+.+++..+++...+..... T Consensus 231 ~~~~~~~G~~~~p~da~ll~rgl~TL~lRm~~~~~nA~~l 270 (392) T d1gc0a_ 231 QGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVL 270 (392) T ss_dssp THHHHHTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH T ss_pred HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH T ss_conf 9999703886880457999822060899999999999999 No 43 >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Probab=24.53 E-value=17 Score=13.79 Aligned_cols=18 Identities=22% Similarity=0.012 Sum_probs=10.2 Q ss_pred HHHHHCCCCCEEEEEECC Q ss_conf 997620169718998278 Q gi|254780537|r 225 AINQMRSHKIKFIFSEST 242 (294) Q Consensus 225 ~~~~ik~~~v~~if~e~~ 242 (294) .....+..+.+++..|-. T Consensus 197 ~~~~~~~~~~p~~~~e~g 214 (304) T d1bhga3 197 FENWYKKYQKPIIQSEYG 214 (304) T ss_dssp HHHHHHHSCSCEEEEECC T ss_pred HHHHHCCCCCCEEEECCH T ss_conf 777632389986873120 No 44 >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Probab=23.03 E-value=18 Score=13.60 Aligned_cols=25 Identities=8% Similarity=-0.069 Sum_probs=8.6 Q ss_pred CCCEEEEEECCCCH-HHHHHHHHHHC Q ss_conf 69718998278997-99999999829 Q gi|254780537|r 232 HKIKFIFSESTNSD-QPAKQVAYETN 256 (294) Q Consensus 232 ~~v~~if~e~~~~~-~~~~~ia~e~~ 256 (294) +||+.|...-...+ ..++.++++.| T Consensus 367 ~GVP~l~~P~~~DQ~~nA~rlve~~G 392 (461) T d2acva1 367 FGVPILTWPIYAEQQLNAFRLVKEWG 392 (461) T ss_dssp TTCCEEECCCSTTHHHHHHHHHHTSC T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHC T ss_conf 59998967760002889999999849 No 45 >d1o66a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Neisseria meningitidis [TaxId: 487]} Probab=22.56 E-value=19 Score=13.53 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=35.9 Q ss_pred CHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE Q ss_conf 78999999976201697189982789979999999982993444 Q gi|254780537|r 218 SPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGG 261 (294) Q Consensus 218 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 261 (294) ..+.|-+-...+++.|.-.|..| -.+.++++.|.+.+++++++ T Consensus 157 e~~~l~~~a~~le~AGa~~ivlE-~Vp~~va~~It~~~~iptIg 199 (260) T d1o66a_ 157 KAQALLNDAKAHDDAGAAVVLME-CVLAELAKKVTETVSCPTIG 199 (260) T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE-SCCHHHHHHHHHHCSSCEEE T ss_pred HHHHHHHHHHHHHHHHHHEHHHH-HCCHHHHHHHHHHHCCEEEE T ss_conf 05999999999997332332554-40077899998642501554 No 46 >d1n2za_ c.92.2.2 (A:) Vitamin B12 binding protein BtuF {Escherichia coli [TaxId: 562]} Probab=21.50 E-value=20 Score=13.40 Aligned_cols=41 Identities=10% Similarity=-0.065 Sum_probs=22.2 Q ss_pred HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC Q ss_conf 145775297288722688640007899999997620169718998278 Q gi|254780537|r 195 VYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSEST 242 (294) Q Consensus 195 ~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~ 242 (294) +.+.+..|.+.++-.........|...+ -..+..+||.... T Consensus 156 ~~~i~~aG~~nv~~~~~~~~~~vs~E~i-------~~~dPDvIi~~~~ 196 (245) T d1n2za_ 156 NQVLEVCGGENIFKDSRVPWPQVSREQV-------LARSPQAIVITGG 196 (245) T ss_dssp HHHHHHTTEEETTTTCSSSSCBCCHHHH-------HTTCCSEEEEESC T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHHH-------HHHCCCEEEEECC T ss_conf 8999870775333445678876686778-------7609999999589 No 47 >d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Probab=21.30 E-value=20 Score=13.37 Aligned_cols=46 Identities=7% Similarity=-0.001 Sum_probs=34.1 Q ss_pred CCCHHHHHHHHHHHCCCCCEEEE-EECCCCHHHHHHHHHHHCCCEEE Q ss_conf 00789999999762016971899-82789979999999982993444 Q gi|254780537|r 216 ERSPSMMRHAINQMRSHKIKFIF-SESTNSDQPAKQVAYETNASYGG 261 (294) Q Consensus 216 eps~~~l~~~~~~ik~~~v~~if-~e~~~~~~~~~~ia~e~~~~~~~ 261 (294) ..++....+.++.+-+.+++|+. +.....++.+..+|++.++|+.. T Consensus 63 ~~~~~~~~~~i~~l~~~~~~~lIit~g~~~p~~li~~a~~~~iPll~ 109 (129) T d1ko7a1 63 LLPDEERKGRMRKLCRPETPAIIVTRDLEPPEELIEAAKEHETPLIT 109 (129) T ss_dssp HSCHHHHTTHHHHHCCTTCCCEEECTTCCCCHHHHHHHHHTTCCEEE T ss_pred HCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEE T ss_conf 25807899999998178986899979999989999999980984999 No 48 >d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]} Probab=21.04 E-value=20 Score=13.33 Aligned_cols=51 Identities=14% Similarity=-0.062 Sum_probs=30.7 Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCH Q ss_conf 643188899999989986301455337899886307844736998266521 Q gi|254780537|r 145 TALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLV 195 (294) Q Consensus 145 ~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~ 195 (294) .-+.|..+-......+++.-+++...+.......-+....++--++||++. T Consensus 270 ~~~sP~~a~l~~rgl~TL~lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~ 320 (421) T d2ctza1 270 QALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLP 320 (421) T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTST T ss_pred CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC T ss_conf 879979999885677400567999999899987644148974699668747 No 49 >d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Probab=20.53 E-value=21 Score=13.26 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=47.2 Q ss_pred EEEECCCCHHHH---------HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC Q ss_conf 998266521457---------75297288722688640007899999997620169718998278997999999998299 Q gi|254780537|r 187 FVTSEGCLVYLA---------EDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNA 257 (294) Q Consensus 187 ~v~~H~af~Y~~---------~~yGl~~~~~~~~~~~~eps~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~ 257 (294) =+|+|-||+... .++|++.+-..|-.+...-....|+++++. .+-..|..-...++.-++.|.+ +|+ T Consensus 116 ~vTFHRAfD~~~d~~~al~~Li~lG~~rILTSGg~~~a~~G~~~L~~L~~~---a~~~iIm~GgGI~~~Ni~~l~~-~g~ 191 (247) T d1twda_ 116 AVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAH---RDAPIIMAGAGVRAENLHHFLD-AGV 191 (247) T ss_dssp EEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTS---SSCCEEEEESSCCTTTHHHHHH-HTC T ss_pred CEEEEHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHH-CCC T ss_conf 725300246528999999999766978675157988656779999999983---6996899548789899999997-699 Q ss_pred CEE Q ss_conf 344 Q gi|254780537|r 258 SYG 260 (294) Q Consensus 258 ~~~ 260 (294) +-. T Consensus 192 ~e~ 194 (247) T d1twda_ 192 LEV 194 (247) T ss_dssp SEE T ss_pred CEE T ss_conf 879 No 50 >d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]} Probab=20.46 E-value=21 Score=13.25 Aligned_cols=22 Identities=14% Similarity=0.212 Sum_probs=15.6 Q ss_pred HHHHHHHHHCCCCCEEEEEECC Q ss_conf 9999997620169718998278 Q gi|254780537|r 221 MMRHAINQMRSHKIKFIFSEST 242 (294) Q Consensus 221 ~l~~~~~~ik~~~v~~if~e~~ 242 (294) +-.-+.+.|++++++|-+.... T Consensus 195 ya~lL~~ki~~~~~~~~LvNTG 216 (318) T d1j3ba1 195 YARMLGEKIRKHAPRVYLVNTG 216 (318) T ss_dssp HHHHHHHHHHHHCCEEEEEECS T ss_pred HHHHHHHHHHHCCCCEEEEECC T ss_conf 8999999998669748997045 Done!