RPSBLAST alignment of GI: 254780537 and protein with PDBid: 3cx3
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} Length = 284
Score = 158 bits (400), Expect = 1e-39
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 18 SATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLIL 77
S T + +++SF I + + ++ DL V ++++ + HS++ ++ D I +AD+ +
Sbjct: 5 SQTGKGMKIVTSFYPIYAMVKEVSGDLNDVR-MIQSSSGIHSFEPSANDIAAIYDADVFV 63
Query: 78 CNGLHLEETYMKYFTNLKKG---------TKIITVTDGINPIGVSEDTSVDSEPNPHAWM 128
+ LE NLKK + G+ + + + +PH W+
Sbjct: 64 YHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERVPGLEDVEAGDGVDEKTLYDPHTWL 123
Query: 129 SLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFV 188
A + I L+ +D + + Y+ NA+ + +K + + + EK + FV
Sbjct: 124 DPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQ--KTFV 181
Query: 189 TSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPA 248
T YLA+ FG L + I+ + E SP + ++++K+K IF+ES S + A
Sbjct: 182 TQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVA 241
Query: 249 KQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293
+ + T G+ ++ L TYL+ L +++ + + L
Sbjct: 242 ETLVKSTGV---GLKTLNPLESDPQNDKTYLENLEENMSILAEEL 283