RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780537|ref|YP_003064950.1| periplasmic solute binding protein [Candidatus Liberibacter asiaticus str. psy62] (294 letters) >d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 279 Score = 190 bits (484), Expect = 1e-49 Identities = 114/274 (41%), Positives = 177/274 (64%), Gaps = 2/274 (0%) Query: 20 TTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCN 79 T +KK VL++F+++ D+ QN+A D + V ++ G + H Y+ T +D +K Q+ADLIL N Sbjct: 3 TEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYN 62 Query: 80 GLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIEN 139 G++LE + ++ N+K + +T+GI PI +++ +PNPHAWMS NA++Y+EN Sbjct: 63 GMNLERWFEQFLGNVKD-VPSVVLTEGIEPIPIADGP-YTDKPNPHAWMSPRNALVYVEN 120 Query: 140 IRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAE 199 IR+A LDP NAK Y NA YSE+++ L +E+V +R+ V+ EG YLA Sbjct: 121 IRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLAR 180 Query: 200 DFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASY 259 D+G + +Y+WPIN++ + +P ++ I +++++ + IF EST SD+ KQVA T A + Sbjct: 181 DYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARF 240 Query: 260 GGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 GG LYVDSLS +GP PT+LDLL + I + L Sbjct: 241 GGNLYVDSLSTEEGPVPTFLDLLEYDARVITNGL 274 >d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]} Length = 286 Score = 182 bits (461), Expect = 4e-47 Identities = 92/282 (32%), Positives = 159/282 (56%), Gaps = 7/282 (2%) Query: 18 SATTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLIL 77 + + QK V+++ SII DIT+NIA D + + ++V G D H Y+ D K ADLI Sbjct: 4 TTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIF 63 Query: 78 CNGLHLEETYMKYFTNL------KKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLT 131 NG++LE +FT L + V+DG++ I + + + +PHAW++L Sbjct: 64 YNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQ-NEKGKEDPHAWLNLE 122 Query: 132 NAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSE 191 N +I+ +NI K L+A DP+N + YE N +EY++K+ K + K+ EK+ VTSE Sbjct: 123 NGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSE 182 Query: 192 GCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQV 251 G Y ++ +G S Y+W IN++ E +P ++ + ++R K+ +F ES+ D+P K V Sbjct: 183 GAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTV 242 Query: 252 AYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 + +TN ++ DS+++ +Y +++++L KI + L Sbjct: 243 SQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGL 284 >d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]} Length = 277 Score = 174 bits (440), Expect = 1e-44 Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 7/276 (2%) Query: 23 KKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLH 82 K +V+++ +I D +NIA+ V + L+ G D H Y T+ D + NADLIL NGLH Sbjct: 2 KPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLH 61 Query: 83 LEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRK 142 LE + F+ L+ ++ V++ I + ++E +PH W + ++ + + Sbjct: 62 LETKMGEVFSKLRGSRLVVAVSETIPVS--QRLSLEEAEFDPHVWFDVKLWSYSVKAVYE 119 Query: 143 ALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFG 202 +L L P +++ + Y +++ ++ + + + E+R VT+ Y + +G Sbjct: 120 SLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYG 179 Query: 203 FKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNAS---- 258 F+ L +++ SE S M+ + K+ IF ES+ + + + A Sbjct: 180 FEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVV 239 Query: 259 -YGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 GG L+ D++ TY+ ++ ++ IV L Sbjct: 240 QIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAAL 275 >d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 289 Score = 150 bits (378), Expect = 2e-37 Identities = 58/297 (19%), Positives = 102/297 (34%), Gaps = 42/297 (14%) Query: 26 VLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEE 85 + S + I DLV V+ LV ND H+Y+ + A+ + GL E+ Sbjct: 5 ITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQ 64 Query: 86 TYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSE------------------------ 121 +++ K+I GI P+ + + E Sbjct: 65 PWLEKLKAANANMKLIDSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAK 124 Query: 122 -----PNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTR 176 +PH W+S T I K L LDP N +YE N + ++ L Sbjct: 125 GALMVADPHIWLSPTLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQI 184 Query: 177 IEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKF 236 ++ + K Y A D+ + E S ++ I+ + + + Sbjct: 185 LQPLPQRKFI--VFHPSWAYFARDYNLV--QIPIEVEGQEPSAQELKQLIDTAKENNLTM 240 Query: 237 IFSESTNSDQPAKQVAYETNASYGGVLYVDSLSKPDGPAPTYLDLLRFSLTKIVDTL 293 +F E+ S + ++ +A E A GV +D L+ + L+ KI + Sbjct: 241 VFGETQFSTKSSEAIAAEIGA---GVELLDPLAA------DWSSNLKAVAQKIANAN 288 >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Score = 29.8 bits (66), Expect = 0.27 Identities = 12/51 (23%), Positives = 19/51 (37%) Query: 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKI 234 KRW V S G Y A + + + I S R +R + ++ Sbjct: 23 KRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFEL 73 >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} Length = 328 Score = 28.7 bits (63), Expect = 0.60 Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Query: 69 KIQNADLILCNGL----HLEETYMKYFTNLKKGTKIITVTD 105 +I N +I N ++ + F N+K+G +I++ Sbjct: 227 RIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP 267 >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Score = 28.6 bits (63), Expect = 0.71 Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 5/68 (7%) Query: 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIK-----FIF 238 +R+F E + Y + + L + P+ + + + +I F Sbjct: 21 RRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYV 80 Query: 239 SESTNSDQ 246 + + Sbjct: 81 QADSPEEM 88 >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Score = 28.3 bits (62), Expect = 0.72 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 2/82 (2%) Query: 165 KIRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRH 224 K+++ L + K +KRW + Y + S + P+++ S Sbjct: 1 KVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQGDNK 60 Query: 225 AINQMRSHKIKFIFSESTNSDQ 246 ++ + + F+F ++ Sbjct: 61 F--EVVTTQRTFVFRVEKEEER 80 >d1y5ia2 c.81.1.1 (A:1-1074) Respiratory nitrate reductase 1 alpha chain {Escherichia coli [TaxId: 562]} Length = 1074 Score = 27.5 bits (60), Expect = 1.2 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 12/75 (16%) Query: 70 IQNADLILCNGLHLEETYMKYFTNL----KKGTKIITVTDGINPIGVSEDTSVDSE---P 122 N+ I+ G ++ +T KGTK + + P +E + P Sbjct: 243 WYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVA----VTPD-YAEIAKLCDLWLAP 297 Query: 123 NPHAWMSLTNAMIYI 137 ++ AM ++ Sbjct: 298 KQGTDAAMALAMGHV 312 >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 876 Score = 27.4 bits (59), Expect = 1.6 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 2/92 (2%) Query: 136 YIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLV 195 Y+E + L + K + + +Y ++R S L T I V K ++ Sbjct: 731 YLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGI--VQGLKGDQENVHPDVM 788 Query: 196 YLAEDFGFKSLYLWPINSDSERSPSMMRHAIN 227 + F ++ I D + + ++ A Sbjct: 789 LVQPRVEFILSFIDHIAGDEDHTDGVVACAAG 820 >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 219 Score = 27.1 bits (59), Expect = 1.8 Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 6/53 (11%) Query: 127 WMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRN------SILPL 173 + ++ + + L P R +E+IR S+LPL Sbjct: 157 QLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL 209 >d1dxxa1 a.40.1.1 (A:9-119) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 Score = 26.9 bits (59), Expect = 2.0 Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 9/92 (9%) Query: 82 HLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIR 141 + ++ NL + DG + + E + P + + + N+ Sbjct: 20 QFSKFGKQHIENLFSDLQ-----DGRRLLDLLEGLTGQKLPKEKG----STRVHALNNVN 70 Query: 142 KALTALDPSNAKKYELNAREYSEKIRNSILPL 173 KAL L +N + + + + L L Sbjct: 71 KALRVLQNNNVDLVNIGSTDIVDGNHKLTLGL 102 >d2fg9a1 b.45.1.1 (A:1-157) 5-nitroimidazole resistance protein BT3078 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 157 Score = 26.6 bits (58), Expect = 2.2 Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 1/88 (1%) Query: 93 NLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNA 152 L++ + + + S + +IE++ + ALD Sbjct: 60 MLQRNNNVCITFSLGHKLVYQHKQVACSYSMRSESAMCRGKVEFIEDMEEKRHALD-IIM 118 Query: 153 KKYELNAREYSEKIRNSILPLKTRIEKV 180 + Y + YS+ ++ K ++++ Sbjct: 119 RHYTKDQFSYSDPAVRNVKVWKVPVDQM 146 >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 406 Score = 27.0 bits (59), Expect = 2.3 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 4/41 (9%) Query: 69 KIQNADLILCNGLH----LEETYMKYFTNLKKGTKIITVTD 105 I D+IL N L + K K G KII++ Sbjct: 294 LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKS 334 >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100 Score = 26.6 bits (58), Expect = 2.5 Identities = 7/61 (11%), Positives = 19/61 (31%), Gaps = 3/61 (4%) Query: 184 KRWFVTSEGCLVYLAEDFGFK---SLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSE 240 RWF L Y + + L L ++ + + + ++ ++ Sbjct: 22 TRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAK 81 Query: 241 S 241 + Sbjct: 82 T 82 >d1wpba_ a.233.1.1 (A:) Hypothetical protein YfbU {Escherichia coli [TaxId: 562]} Length = 168 Score = 26.3 bits (58), Expect = 3.4 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 128 MSLTNAMIYI-ENIRKALTALDPSNAKKYELNAR 160 M +TNA I N K +T LDP+NA++Y Sbjct: 5 MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQT 38 >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 Score = 26.1 bits (56), Expect = 3.6 Identities = 10/63 (15%), Positives = 17/63 (26%), Gaps = 6/63 (9%) Query: 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTN 243 KRW S+ Y D + + I+ +R + K F Sbjct: 126 KRWCALSKTVFYYYGSDKDKQQKGEFAID------GYDVRMNNTLRKDGKKDCCFEICAP 179 Query: 244 SDQ 246 + Sbjct: 180 DKR 182 >d2uyoa1 c.66.1.57 (A:14-310) Putative methyltransferase ML2640 {Mycobacterium leprae [TaxId: 1769]} Length = 297 Score = 25.5 bits (55), Expect = 5.9 Identities = 8/20 (40%), Positives = 10/20 (50%) Query: 181 DPEKRWFVTSEGCLVYLAED 200 DP R +EG L+YL Sbjct: 163 DPSARTAWLAEGLLMYLPAT 182 >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 Score = 25.3 bits (54), Expect = 6.5 Identities = 5/29 (17%), Positives = 13/29 (44%) Query: 211 INSDSERSPSMMRHAINQMRSHKIKFIFS 239 ++ ++ R PS A+ + +K + Sbjct: 13 VSFETHRIPSSTIEALEAAHAKGLKIFIA 41 >d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli [TaxId: 562]} Length = 100 Score = 25.2 bits (55), Expect = 6.5 Identities = 11/46 (23%), Positives = 14/46 (30%), Gaps = 7/46 (15%) Query: 133 AMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIE 178 +M E R AL A KY E I + + R Sbjct: 4 SMKAREVKRVAL-------ADKYFAKRAELKAIISDVNASDEDRWN 42 >d1pxya_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 500 Score = 25.3 bits (55), Expect = 6.6 Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 8/105 (7%) Query: 69 KIQNADLILCNGLHLEETYMKYFTNLKKGTKIITVTDGINPIGVSEDTSVDSEPNPHAWM 128 + + + N L ++ F +++ G ++ V + +SV+ + Sbjct: 270 RDERCYRLWINSLGIDSYVNNVFEDVRNGWILLEV------LDKVSPSSVNWKHASKP-- 321 Query: 129 SLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPL 173 + +EN + + + + + + IL L Sbjct: 322 PIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLILGL 366 >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 101 Score = 25.4 bits (54), Expect = 6.8 Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 1/65 (1%) Query: 166 IRNSILPLKTRIEKVDPEKRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHA 225 I+N IL L+ + +FV + + Y E + + + ++ Sbjct: 2 IKNGILYLEDPVNHE-WYPHYFVLTSSKIYYSEETSSDLLRGVLDVPACQIAIRPEGKNN 60 Query: 226 INQMR 230 + Sbjct: 61 RLFVF 65 >d1dpea_ c.94.1.1 (A:) Dipeptide-binding protein {Escherichia coli [TaxId: 562]} Length = 507 Score = 25.1 bits (53), Expect = 7.0 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 12/62 (19%) Query: 118 VDSEP---NPHAWMSLTNAMIYIENIRKALTALDPSN-------AKKYELN--AREYSEK 165 + P NP ++S T + L A+K+E++ + Y+ Sbjct: 7 SEGSPEGFNPQLFISGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFH 66 Query: 166 IR 167 +R Sbjct: 67 LR 68 >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118 Score = 25.3 bits (54), Expect = 7.2 Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 7/67 (10%) Query: 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINSDSERSPSMMRHAINQMRSHKIKFIFSESTN 243 +R+FV L Y ++ K + + + + KF+F Sbjct: 26 QRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPE-------EAGKFVFEIIPA 78 Query: 244 SDQPAKQ 250 S + Sbjct: 79 SWDQNRM 85 >d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica [TaxId: 6192]} Length = 80 Score = 25.0 bits (54), Expect = 7.2 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 3/67 (4%) Query: 138 ENIRKALTALD-PSNAKKYELNARE-YSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLV 195 + +R L L Y + RE + + N L L +D + S + Sbjct: 14 QPVRLFLEYLGEEYEEHLYGRDDREKWMSEKFNMGLDLPNLPYYIDDKC-KLTQSVAIMR 72 Query: 196 YLAEDFG 202 Y+A+ G Sbjct: 73 YIADKHG 79 >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 Score = 24.8 bits (53), Expect = 8.5 Identities = 7/30 (23%), Positives = 15/30 (50%) Query: 184 KRWFVTSEGCLVYLAEDFGFKSLYLWPINS 213 +RWF+ ++ CL Y + + P+ + Sbjct: 23 RRWFILTDNCLYYFEYTTDKEPRGIIPLEN 52 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.317 0.132 0.377 Gapped Lambda K H 0.267 0.0498 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,029,610 Number of extensions: 46480 Number of successful extensions: 169 Number of sequences better than 10.0: 1 Number of HSP's gapped: 164 Number of HSP's successfully gapped: 29 Length of query: 294 Length of database: 2,407,596 Length adjustment: 85 Effective length of query: 209 Effective length of database: 1,240,546 Effective search space: 259274114 Effective search space used: 259274114 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 52 (24.4 bits)