RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR01257
>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
Score = 78.1 bits (192), Expect = 2e-15
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 17 ISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTV 76
+ + P+G A++ +N+ EN ITA +G NGAGK+T + GL+P G++ + + +
Sbjct: 935 VKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDI 994
Query: 77 ENALKA--DLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIVTEA-LE 133
E L A + PQ +I + + E ++ + K +W + ++ EA LE
Sbjct: 995 ETNLDAVRQSLGMCPQ-HNILFHHLTVAEHILFYAQLKGRSW------EEAQLEMEAMLE 1047
Query: 134 NVGMSSMRQRQIGELSIGQQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSL 193
+ G+ R + +LS G Q+++ +A A ++V+++DEP + +D + R + LL
Sbjct: 1048 DTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKY 1107
Query: 194 LNEDIMILVSTHNINSIPSFCDR 216
+ +I+ STH+++ DR
Sbjct: 1108 RSGRTIIM-STHHMDEADLLGDR 1129