RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 42/187 (22%), Positives = 94/187 (50%), Gaps = 16/187 (8%)

Query: 42   ALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVENALKADL---IAYIPQTESIDWTF 98
             L+G+NGAGK+T F+ + G   +  G  ++  +++   + +D+   + Y PQ ++ID   
Sbjct: 1969 GLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNI-SDVHQNMGYCPQFDAID--- 2024

Query: 99   PILVEDVVMMGR---YKHMNWRRVASNNDYRIVTEALENVGMSSMRQRQIGELSIGQQKR 155
                   ++ GR   Y +   R V +    ++   +++++G+S    R  G  S G +++
Sbjct: 2025 ------DLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRK 2078

Query: 156  VFLARALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCD 215
            +  A AL     ++++DEP   +D +  R +   + S++ E   +++++H++    + C 
Sbjct: 2079 LSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCT 2138

Query: 216  RTIFLKK 222
            R   + K
Sbjct: 2139 RLAIMVK 2145