RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 67.0 bits (164), Expect = 5e-12
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 9 KGGLELKDISVTYP-NGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKG 67
+G +E ++++ YP AL+ ++L I AL+G +G+GKSTL I D G
Sbjct: 328 RGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSG 387
Query: 68 SISIFNQTVENALKADLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRI 127
I + + + A L + F + + + GR A +
Sbjct: 388 QILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGR------TEQADRAEIER 441
Query: 128 VTE---ALENV-GMSSMRQRQIGE----LSIGQQKRVFLARALAQKSQVIIMDEPFAAID 179
A + V + IGE LS GQ++R+ +ARAL + + ++I+DE +A+D
Sbjct: 442 ALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALD 501
Query: 180 FKTEREMIFLLKSLLNEDIMILVSTHNINSI 210
++ER + L+ L+ LV H +++I
Sbjct: 502 NESERLVQAALERLMQGRTT-LVIAHRLSTI 531