RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR00956

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 69/232 (29%)

Query: 28  LEDVNLFIPENTITALIGLNGAGKSTLFQAI-----MGLI----------PLDKG---SI 69
           L +V+ ++   T+TAL+G +GAGK+TL   +      G+I          PLD     SI
Sbjct: 779 LNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRSI 838

Query: 70  SIFNQ--------TVENALKADLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVAS 121
               Q        TV  +L+    AY+ Q +S+                         + 
Sbjct: 839 GYVQQQDLHLPTSTVRESLR--FSAYLRQPKSVS-----------------------KSE 873

Query: 122 NNDYRIVTEALENVGMSSMRQRQIGE----LSIGQQKRVFLARALAQKSQVII-MDEPFA 176
             +Y  V E ++ + M S     +G     L++ Q+KR+ +   L  K ++++ +DEP +
Sbjct: 874 KMEY--VEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTS 931

Query: 177 AIDFKTEREMIFLLKSLLNEDIMILVSTHNINSIPS------FCDRTIFLKK 222
            +D +T   +  L++ L +    IL + H     PS      F DR + L+K
Sbjct: 932 GLDSQTAWSICKLMRKLADHGQAILCTIHQ----PSAILFEEF-DRLLLLQK 978