RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 24/237 (10%)

Query: 2   KTAVASTKGGLELKDISVTY-PNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMG 60
             A+   +G +  ++I   Y P+    L ++NL I       ++G +G+GKSTL + +  
Sbjct: 446 LAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQR 505

Query: 61  LIPLDKGSISIFNQTVENALKADLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVA 120
           L     G + +    +  A  A L   +           +++++ V+  R    N     
Sbjct: 506 LYTPQHGQVLVDGVDLAIADPAWLRRQMG----------VVLQENVLFSRSIRDNIALCN 555

Query: 121 SNNDYRIVTEALENVG----MSSMRQ---RQIGE----LSIGQQKRVFLARALAQKSQVI 169
               +  V  A +  G    +S + Q    ++GE    LS GQ++R+ +ARAL    +++
Sbjct: 556 PGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRIL 615

Query: 170 IMDEPFAAIDFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKKTVLA 226
           I DE  +A+D+++E  ++  ++ +     +I+++ H ++++ + CDR I L+K  +A
Sbjct: 616 IFDEATSALDYESEALIMRNMREICRGRTVIIIA-HRLSTVRA-CDRIIVLEKGQIA 670