RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 46.5 bits (111), Expect = 7e-06
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 32/215 (14%)
Query: 12 LELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMG--LIPLDKGSI 69
L++KD+ V+ L+ VNL + + I A++G NG+GKSTL + I G + G+I
Sbjct: 1 LKIKDLHVSV-EDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTI 59
Query: 70 SIFNQTVENALKADLIA----YI-PQTESIDWTFPILVEDV--VMMGRYKH--MNWRRVA 120
Q + L+ D A ++ Q E++ V + +N RR A
Sbjct: 60 LFKGQDL-LELEPDERARAGLFLAFQYP----------EEIPGVSNLEFLRSALNARRSA 108
Query: 121 SNND-------YRIVTEALENVGMS-SMRQRQIGE-LSIGQQKRVFLARALAQKSQVIIM 171
+ +++ L +GM R + E S G++KR + + + ++ I+
Sbjct: 109 RGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAIL 168
Query: 172 DEPFAAIDFKTEREMIFLLKSLLNEDIMILVSTHN 206
DE + +D + + + L D L+ TH
Sbjct: 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHY 203