RPSBLAST alignment for GI: 254780538 and conserved domain: COG4988

>gnl|CDD|34593 COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]. Length = 559

 Score =  117 bits (294), Expect = 4e-27
 Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 31/248 (12%)

Query: 12  LELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISI 71
           + L+++S  YP+G  AL D+NL I    +TAL+G +GAGKSTL   ++G +   +G I +
Sbjct: 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRV 380

Query: 72  FNQTVENALKADL---IAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIV 128
               + +         I+++ Q   +   F   + + +++ R         AS+ +   +
Sbjct: 381 NGIDLRDLSPEAWRKQISWVSQNPYL---FAGTIRENILLARPD-------ASDEE---I 427

Query: 129 TEALENVGMSSMRQR------QIGE----LSIGQQKRVFLARALAQKSQVIIMDEPFAAI 178
             AL+  G+     +       IGE    LS GQ +R+ LARAL   + ++++DEP A +
Sbjct: 428 IAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHL 487

Query: 179 DFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKKTVLASGLTSDIFNEDN 238
           D +TE+ ++  L+ L  +  ++++ TH +       DR + L    L          E +
Sbjct: 488 DAETEQIILQALQELAKQKTVLVI-THRLEDAAD-ADRIVVLDNGRLVE---QGTHEELS 542

Query: 239 IQKTFGAQ 246
            ++   A 
Sbjct: 543 EKQGLYAN 550