RPSBLAST alignment for GI: 254780538 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 82.5 bits (204), Expect = 1e-16
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 27 ALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTV-----ENALK 81
AL+DV+ +P LIG NGAGKSTL + + G+ P D G++++ +
Sbjct: 37 ALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLLGLGGGFN 96
Query: 82 ADLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIVTEALENVGMSSMR 141
+L E++ + GR ++ + + D I L +
Sbjct: 97 PELTGR---------------ENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFI----- 136
Query: 142 QRQIGELSIGQQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSLLNEDIMIL 201
+ S G + R+ A A A + ++++DE A D + + L+ LL + ++
Sbjct: 137 DLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVI 196
Query: 202 VSTHNINSIPSFCDRTIFLKK 222
+ +H+ +SI CDR + L+K
Sbjct: 197 LVSHDPSSIKRLCDRALVLEK 217