RPSBLAST alignment for GI: 254780538 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 115 bits (290), Expect = 1e-26
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 50/215 (23%)
Query: 12 LELKDISVTYPNGY-CALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSIS 70
+E K++S +YP L+DV+L I A++G +G+GKSTL + ++ L G I
Sbjct: 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEIL 60
Query: 71 IFNQTVENALKADL---IAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRI 127
I + + L IAY+PQ P L +
Sbjct: 61 IDGVDLRDLDLESLRKNIAYVPQD-------PFLFSGTIR-------------------- 93
Query: 128 VTEALENVGMSSMRQRQIGELSIGQQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMI 187
EN+ LS GQ++R+ +ARAL + ++I+DE +A+D +TE ++
Sbjct: 94 -----ENI------------LSGGQRQRIAIARALLRDPPILILDEATSALDPETEALIL 136
Query: 188 FLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKK 222
L++L +I++ H +++I DR I L
Sbjct: 137 EALRALAKGKTVIVI-AHRLSTI-RDADRIIVLDD 169