RPSBLAST alignment for GI: 254780538 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 101 bits (252), Expect = 3e-22
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 30/228 (13%)
Query: 10 GGLELKDISVTYPNG-YCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGS 68
G +E +++S +YPN AL++V+L I A+IG G+GKSTL + + GL GS
Sbjct: 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGS 60
Query: 69 ISIFNQTVENALKADL---IAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDY 125
+ + + ADL I Y+PQ ++ F + D + +G +D
Sbjct: 61 VLLDGTDIRQLDPADLRRNIGYVPQDVTL---FYGTLRDNITLGA---------PLADDE 108
Query: 126 RIVTEALENVGMSSMRQR-------QIGE----LSIGQQKRVFLARALAQKSQVIIMDEP 174
RI+ A E G++ + QIGE LS GQ++ V LARAL ++++DEP
Sbjct: 109 RIL-RAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEP 167
Query: 175 FAAIDFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKK 222
+A+D +E + L+ LL + +I++ TH S+ DR I +
Sbjct: 168 TSAMDMNSEERLKERLRQLLGDKTLIII-THR-PSLLDLVDRIIVMDS 213