RPSBLAST alignment for GI: 254780538 and conserved domain: cd03259
>gnl|CDD|73018 cd03259, ABC_Carb_Solutes_like, ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 213
Score = 134 bits (338), Expect = 3e-32
Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 12 LELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISI 71
LELK +S TY + AL+D++L + AL+G +G GK+TL + I GL D G I I
Sbjct: 1 LELKGLSKTYGSVR-ALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILI 59
Query: 72 FNQTVENALKADL-IAYIPQTESIDWTFPIL-VEDVVMMGRYKHMNWRRVASNNDYRIVT 129
+ V I + Q ++ FP L V + + G + R V V
Sbjct: 60 DGRDVTGVPPERRNIGMVFQDYAL---FPHLTVAENIAFG----LKLRGVPKAEIRARVR 112
Query: 130 EALENVGMSSMRQRQIGELSIGQQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMIFL 189
E LE VG+ + R ELS GQQ+RV LARALA++ ++++DEP +A+D K E+
Sbjct: 113 ELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREE 172
Query: 190 LKSLLNE-DIMILVSTHNINSIPSFCDRTIFLKKTVLA 226
LK L E I + TH+ + DR + + +
Sbjct: 173 LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIV 210