HHsearch alignment for GI: 254780539 and conserved domain: COG4603
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=92.65 E-value=0.59 Score=23.53 Aligned_cols=202 Identities=13% Similarity=0.163 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH-HHHHHHHH---HHCCCC-CCCHHHCCCCCCCCH---H--HH-
Q ss_conf 6899999999999986310246511568999999999-99999752---110222-421121153100270---0--01-
Q gi|254780539|r 67 VGATISGMLATGIMVKIKETTKLREDVAIAVVYIIFY-SFAMFMLS---LSPSAV-YVENIFLGNTLSMSR---S--DT- 135 (273)
Q Consensus 67 ~ga~~~~ll~~~li~~l~~~~~~~~d~~igi~~~~~~-algvllis---~~~~~~-~l~~~LfG~il~i~~---~--di- 135 (273)
T Consensus 120 l~g~~~G~~wa~ipg~Lka~f~~n-EVIttiMlNyIa~~l~~~lV~~~~~~p~~~~~~~T~~i~~~a~lp~~~~~~~~~~ 198 (356)
T COG4603 120 LAGAAGGGLWALIPGLLKARFGVN-EVITTIMLNYIAVYLLNYLVEGPLRDPAGTNFPQTRPIPDAARLPSLFLASGRLH 198 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH
T ss_conf 999999999999999999991862-9999999999999999999807245887678866825751113775542111289
Q ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH-
Q ss_conf 3578876799999999888-----7888724688998717871046779999999999--9999998999999999999-
Q gi|254780539|r 136 IQVLIITFSVACIVYMKWK-----DFVLLFFDERHAHSVGINVKLLKMLFFSLLTITI--VIGFQTVGILLVIATVITP- 207 (273)
Q Consensus 136 ~~~~~~~~i~~~~~~~~~r-----~l~~~sfD~~~A~~~Gi~v~~~~~l~l~l~al~v--~~~v~~vG~llv~allv~P- 207 (273)
T Consensus 199 ~g~lial~~av~~~~ll~kT~~G~~lr~~G~sp~Aa~yaGi~~~r~i~~sm~iSGalAGLaG~~ev~G~~~~~~~~~~~G 278 (356)
T COG4603 199 WGFLLALAAAVLVWFLLKKTVFGYELRVVGLSPRAARYAGISVKRTIFLSMLISGALAGLAGAVEVLGAFGRLRPSISPG 278 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
T ss_conf 99999999999999999981477588872488038998798746899999999999999988999815201000366777
Q ss_pred ----HHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf ----9999852-08989999999999999999999999995798189999999999999999804244
Q gi|254780539|r 208 ----GATAKLM-SKSFGTYLVSSSLLGATSSFLGSYISYFLDCSPGGIIVIIETSLFLLCLFFFSKQY 270 (273)
Q Consensus 208 ----aa~A~~~-~~~~~~~~~~s~~~g~~~~~~G~~lS~~~~lp~g~~Iv~~~~~~f~~~~~~~~~~~ 270 (273)
T Consensus 279 ~Gf~gI~Vallg~~~P~giv~asll~~~l-~~G~~~~~~~~g~P~~lv~v~qg~ii~~~~~~~~~~~~ 345 (356)
T COG4603 279 YGFDGIAVALLGRNNPLGIVFASLLFGFL-YIGAEAAQLNLGVPKELVLVFQGLIILFLLASYVLRRY 345 (356)
T ss_pred CCHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67289999998068837899999999999-98689876404999899999999999999999999998