HHsearch alignment for GI: 254780539 and conserved domain: PRK09535
>PRK09535 btuC corrinoid ABC transporter permease; Reviewed.
Probab=99.91 E-value=8e-22 Score=141.86 Aligned_cols=244 Identities=17% Similarity=0.198 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHCC----CCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999987779999996589963248999999999--------998314----414568999999999999863102
Q gi|254780539|r 19 WMSTLIGCVCGLLSAYLILKGWSSIGNGISHAIFPGIV--------VCHRLN----IPLSVGATISGMLATGIMVKIKET 86 (273)
Q Consensus 19 l~~~li~~~~~~lG~~~v~r~~s~~~~alsH~~l~Gia--------la~~l~----~~~~~ga~~~~ll~~~li~~l~~~ 86 (273)
T Consensus 100 l~A~lvGaaLavaG~lm----Q~l~RNPLAdP~iLGVssGA~lga~~~i~l~~~~~~~~~~~af~gal~~~~~v~~l~~~ 175 (366)
T PRK09535 100 LLGATVGFSLAIAGAVM----QGFFRNPMADPSIIGVSSGAAVGAVAFIVLPLVVPFGLQAAAFAGALIAAFTVYLIATR 175 (366)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999----99728888697287999999999999999988888999999999999999999999980
Q ss_pred CC-CCHH--HHHHHHHHHHHHHHH-HHHHHHCC-CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 46-5115--689999999999999-97521102-2242112115310027000135788767999999998887888724
Q gi|254780539|r 87 TK-LRED--VAIAVVYIIFYSFAM-FMLSLSPS-AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVLLFF 161 (273)
Q Consensus 87 ~~-~~~d--~~igi~~~~~~algv-llis~~~~-~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~~sf 161 (273)
T Consensus 176 ~g~~~~~~LiL~Giavs~~~~Al~~~l~~~~~~~~~~~~~Wl~Gsl~~~~w~~v~~~~~~~~i~~~~~~~~~r~L~~L~l 255 (366)
T PRK09535 176 NGRTPTATLLLAGVAVQTFLGAVISFLLLHSGESIRRAVYWLMGHLHGSTWGDVRAALPVVVVGFVVLLAYARDLNVLLL 255 (366)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
T ss_conf 68887599999999999999999999997481768999999977157898889999999999999999999996420213
Q ss_pred CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68899871787104677999999999999999989999999999999999852089899999999999999999999999
Q gi|254780539|r 162 DERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSYISY 241 (273)
Q Consensus 162 D~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~lS~ 241 (273)
T Consensus 256 Gde~A~sLGvnv~~~r~~~l~la~llta~~Va~~G~IgFVGL-i~PHiaR~l~g~~~r~llp~saL~Ga~lll~aD~laR 334 (366)
T PRK09535 256 GEEDAHTLGIEVERTKRILLAAASVVTAAAVAVAGVIGFVGL-IVPHAMRLLVGPDHRILLPTSALAGASFLVATDTVAR 334 (366)
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 959998789988999999999999999999993341646986-0899999992888434999999999999999999756
Q ss_pred H--HCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9--57981899999999999999998042
Q gi|254780539|r 242 F--LDCSPGGIIVIIETSLFLLCLFFFSK 268 (273)
Q Consensus 242 ~--~~lp~g~~Iv~~~~~~f~~~~~~~~~ 268 (273)
T Consensus 335 ~~p~ElPvGivta-lIG~P~fl~LL~rr~ 362 (366)
T PRK09535 335 SGATEPPVGIITA-ALGAPFFLYLLRKRE 362 (366)
T ss_pred CCCCCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_conf 4864454999999-998999999998406