HHsearch alignment of GI: 254780539 and MMDB domain: 2qi9_A_
>2qi9_A (A:) Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.90 E-value=7.9e-22 Score=141.54 Aligned_cols=250 Identities=12% Similarity=0.081 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCC-----CCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999999999987779999996589963248999999999998----314-----41456899999999999986310246
Q gi|254780539|r 18 IWMSTLIGCVCGLLSAYLILKGWSSIGNGISHAIFPGIVVCH----RLN-----IPLSVGATISGMLATGIMVKIKETTK 88 (273)
Q Consensus 18 ll~~~li~~~~~~lG~~~v~r~~s~~~~alsH~~l~Giala~----~l~-----~~~~~ga~~~~ll~~~li~~l~~~~~ 88 (273)
.++..++|...+.-|...-..-+.-++|.--+..-.|..++. ++. .....+++..+...........++++
T Consensus 60 ~l~a~l~G~~LavsG~~~Q~~~rNpLa~P~ilGi~sga~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (326)
T 2qi9_A 60 TLAVLLVGAALAISGAVXQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRFARRH 139 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999936987674245402589999999998245402789999999999999999999876213
Q ss_pred CCHHHHH--HHHHHHHHH-HHHHHHHHHCC-CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 5115689--999999999-99997521102-2242112115310027000135788767999999998887888724688
Q gi|254780539|r 89 LREDVAI--AVVYIIFYS-FAMFMLSLSPS-AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVLLFFDER 164 (273)
Q Consensus 89 ~~~d~~i--gi~~~~~~a-lgvllis~~~~-~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~~sfD~~ 164 (273)
.+.+..+ |+..+..++ ...++....+. ..+...++.|+....+|+|++...+...+......+.+|++...++|||
T Consensus 140 ~~~~~lil~gi~~~~~~~a~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~l~lg~~ 219 (326)
T 2qi9_A 140 LSTSRLLLAGVALGIISSALXTWAIYFSTSVDLRQLXYWXXGGFGGVDWRQSWLXLALIPVLLWISSQSRPXNXLALGEI 219 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHHHHHHTTCHHHHHHHHTCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56405678999999999999999999840799999999876402546742325678750689999998767665441066
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 99871787104677999999999999999989999999999999999852089899999999999999999999999---
Q gi|254780539|r 165 HAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSYISY--- 241 (273)
Q Consensus 165 ~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~lS~--- 241 (273)
.|++.|+|+++++...+.+.++.++.++..+|.+.+.|+ +.|+.+.+...++.++.++.+.+.|......+..++.
T Consensus 220 ~A~slGv~v~~~~~~~lil~~~lta~~vs~vG~I~FvGL-i~p~iar~l~~~~~~~~l~~s~l~Ga~lll~~d~l~r~~~ 298 (326)
T 2qi9_A 220 SARQLGLPLWFWRNVLVAATGWXVGVSVALAGAIGFIGL-VIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLAL 298 (326)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 777068776676689999999999999970358889898-6899999862776546999999999999999999996605
Q ss_pred -HHCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf -9579818999999999999999980424
Q gi|254780539|r 242 -FLDCSPGGIIVIIETSLFLLCLFFFSKQ 269 (273)
Q Consensus 242 -~~~lp~g~~Iv~~~~~~f~~~~~~~~~~ 269 (273)
..+.|.|..+.++. ..|++.++.++||
T Consensus 299 ~~~eiPvg~~~~liG-~p~fi~ll~k~~k 326 (326)
T 2qi9_A 299 AAAELPIGVVTATLG-APVFIWLLLKAGR 326 (326)
T ss_dssp TTCCCCHHHHHHHHH-HHHHHHHHSCC--
T ss_pred CCCCCHHHHHHHHHH-HHHHHHHHHHCCC
T ss_conf 666631999999999-9999997620479